RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 SPOCK1Q08629 439 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 NFATC3Q12968 1075 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 HBMQ6B0K9 141 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 C5orf46Q6UWT4 87 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 VRK3Q8IV63 474 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 RNF113BQ8IZP6 322 aaKnown RBP8.11□□□□□ -1.11
PTCD3-201ENST00000254630 OR13H1Q8NG92 308 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 RNF128Q8TEB7 428 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 VRK1Q99986 396 aaPredicted RBP8.11□□□□□ -1.11
PTCD3-201ENST00000254630 CPPED1Q9BRF8 314 aaPredicted RBP8.11□□□□□ -1.11
PTCD3-201ENST00000254630 PPIL3Q9H2H8 161 aaKnown RBP8.11□□□□□ -1.11
PTCD3-201ENST00000254630 APMAPQ9HDC9 416 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 ASF1BQ9NVP2 202 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 LRFN1Q9P244 771 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 GLI3P10071 1580 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 TRAV36DV7A0A075B6V5 113 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 LOC105369274A0A096LPK9 316 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 F13BP05160 661 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 CHRM4P08173 479 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 CAMK2DQ13557 499 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 OR4N4Q8N0Y3 316 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 SLAMF7Q9NQ25 335 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 CNOT2Q9NZN8 540 aaKnown RBP8.11□□□□□ -1.11
PTCD3-201ENST00000254630 MMACHCQ9Y4U1 282 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 TLCD2A6NGC4 264 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 H0YIV9 168 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 H3BMQ9 156 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 ZNF593O00488 134 aaPredicted RBP8.11□□□□□ -1.11
PTCD3-201ENST00000254630 UBFD1O14562 309 aaKnown RBP8.11□□□□□ -1.11
PTCD3-201ENST00000254630 TAPBPO15533 448 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 PTTG1O95997 202 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 MT-ND4P03905 459 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 CD27P26842 260 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 TACR3P29371 465 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 BMXP51813 675 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 CARD18P57730 90 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 LTBQ06643 244 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 SF3A2Q15428 464 aaKnown RBP8.11□□□□□ -1.11
PTCD3-201ENST00000254630 TMEM176BQ3YBM2 270 aaPredicted RBP8.11□□□□□ -1.11
PTCD3-201ENST00000254630 C18orf63Q68DL7 685 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 KCTD11Q693B1 232 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 MBOAT2Q6ZWT7 520 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 ZADH2Q8N4Q0 377 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 ASCC1Q8N9N2 400 aaKnown RBP8.11□□□□□ -1.11
PTCD3-201ENST00000254630 ACBD4Q8NC06 268 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 OR4D6Q8NGJ1 314 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 ZFAND2BQ8WV99 257 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 NXPE3Q969Y0 559 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 TM4SF18Q96CE8 201 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 COG8Q96MW5 612 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 TSNAXQ99598 290 aaKnown RBP8.11□□□□□ -1.11
PTCD3-201ENST00000254630 CDCP1Q9H5V8 836 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 TM7SF3Q9NS93 570 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 LAMB2P55268 1798 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 MYH7BA7E2Y1 1941 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 TMED7-TICAM2A0A0A6YYA0 188 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 TCRBV3S1A0A5B6 114 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 FANCGO15287 622 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 TFP02787 698 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 ARAFP10398 606 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 RPL23AP62750 156 aaKnown RBP8.11□□□□□ -1.11
PTCD3-201ENST00000254630 SLC36A2Q495M3 483 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 C6orf15Q6UXA7 325 aaPredicted RBP8.11□□□□□ -1.11
PTCD3-201ENST00000254630 CCBE1Q6UXH8 406 aaPredicted RBP8.11□□□□□ -1.11
PTCD3-201ENST00000254630 HSD17B8Q92506 261 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 LCORQ96JN0 433 aaPredicted RBP8.11□□□□□ -1.11
PTCD3-201ENST00000254630 PRRT1Q99946 306 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 CACNG6Q9BXT2 260 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 OR51E2Q9H255 320 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 NLKQ9UBE8 527 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 TMED7Q9Y3B3 224 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 PCDHGA1Q9Y5H4 931 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 BCORQ6W2J9 1755 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 TMEM269A0A1B0GVZ9 245 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 PPP6CO00743 305 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 FCGR2AP12318 317 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 SMAD2Q15796 467 aaKnown RBP8.11□□□□□ -1.11
PTCD3-201ENST00000254630 EXT1Q16394 746 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 OR4K15Q8NH41 348 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 IL1F10Q8WWZ1 152 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 THAP7Q9BT49 309 aaPredicted RBP8.11□□□□□ -1.11
PTCD3-201ENST00000254630 WASH6PQ9NQA3 447 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 OLAHQ9NV23 265 aa8.11□□□□□ -1.11
PTCD3-201ENST00000254630 RNF212BA8MTL3 300 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 ZNF749O43361 778 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 WNT11O96014 354 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 SERPINE2P07093 398 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 FURINP09958 794 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 AQP2P41181 271 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 KCNJ10P78508 379 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 CYCSP99999 105 aaKnown RBP8.1□□□□□ -1.11
PTCD3-201ENST00000254630 C14orf28Q4W4Y0 310 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 TRIM61Q5EBN2 209 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 EXOSC6Q5RKV6 272 aaKnown RBP8.1□□□□□ -1.11
PTCD3-201ENST00000254630 AGAP7PQ5VUJ5 663 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 AGAP6Q5VW22 663 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 BRIX1Q8TDN6 353 aaKnown RBP8.1□□□□□ -1.11
PTCD3-201ENST00000254630 UCN3Q969E3 161 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 CCDC74AQ96AQ1 378 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 AGAP4Q96P64 663 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms