RNA–Protein interactions for RNA: ENST00000249116.6

APOBEC3A-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-201ENST00000249116 CISD1Q9NZ45 108 aaKnown RBP11.42□□□□□ -0.58
APOBEC3A-201ENST00000249116 KCNE5Q9UJ90 142 aa11.42□□□□□ -0.58
APOBEC3A-201ENST00000249116 TRIM33Q9UPN9 1127 aa11.42□□□□□ -0.58
APOBEC3A-201ENST00000249116 SLC35A3Q9Y2D2 325 aa11.42□□□□□ -0.58
APOBEC3A-201ENST00000249116 FN1P02751 2386 aaKnown RBP11.41□□□□□ -0.58
APOBEC3A-201ENST00000249116 GUSBP08236 651 aa11.41□□□□□ -0.58
APOBEC3A-201ENST00000249116 NCF2P19878 526 aaPredicted RBP11.41□□□□□ -0.58
APOBEC3A-201ENST00000249116 COX5AP20674 150 aa11.41□□□□□ -0.58
APOBEC3A-201ENST00000249116 IGHV1-2P23083 117 aa11.41□□□□□ -0.58
APOBEC3A-201ENST00000249116 FKBP2P26885 142 aaKnown RBP11.41□□□□□ -0.58
APOBEC3A-201ENST00000249116 ACVR1BP36896 505 aa11.41□□□□□ -0.58
APOBEC3A-201ENST00000249116 CDKN2CP42773 168 aa11.41□□□□□ -0.58
APOBEC3A-201ENST00000249116 ARFIP2P53365 341 aa11.41□□□□□ -0.58
APOBEC3A-201ENST00000249116 CDH11P55287 796 aa11.41□□□□□ -0.58
APOBEC3A-201ENST00000249116 SF3A3Q12874 501 aaKnown RBP eCLIP11.41□□□□□ -0.58
APOBEC3A-201ENST00000249116 PDK3Q15120 406 aa11.41□□□□□ -0.58
APOBEC3A-201ENST00000249116 PGGHGQ32M88 737 aa11.41□□□□□ -0.58
APOBEC3A-201ENST00000249116 SEZ6L2Q6UXD5 910 aa11.41□□□□□ -0.58
APOBEC3A-201ENST00000249116 ATG4DQ86TL0 474 aaPredicted RBP11.41□□□□□ -0.58
APOBEC3A-201ENST00000249116 MTDHQ86UE4 582 aaKnown RBP11.41□□□□□ -0.58
APOBEC3A-201ENST00000249116 FUNDC1Q8IVP5 155 aa11.41□□□□□ -0.58
APOBEC3A-201ENST00000249116 CLEC4FQ8N1N0 589 aa11.41□□□□□ -0.58
APOBEC3A-201ENST00000249116 UBE2J2Q8N2K1 259 aa11.41□□□□□ -0.58
APOBEC3A-201ENST00000249116 XAGE5Q8WWM1 108 aa11.41□□□□□ -0.58
APOBEC3A-201ENST00000249116 RADILQ96JH8 1075 aa11.41□□□□□ -0.58
APOBEC3A-201ENST00000249116 NSD1Q96L73 2696 aaPredicted RBP11.41□□□□□ -0.58
APOBEC3A-201ENST00000249116 PANX1Q96RD7 426 aa11.41□□□□□ -0.58
APOBEC3A-201ENST00000249116 MDFIQ99750 246 aa11.41□□□□□ -0.58
APOBEC3A-201ENST00000249116 INPP5KQ9BT40 448 aa11.41□□□□□ -0.58
APOBEC3A-201ENST00000249116 TRAF4Q9BUZ4 470 aaPredicted RBP11.41□□□□□ -0.58
APOBEC3A-201ENST00000249116 CCDC167Q9P0B6 97 aa11.41□□□□□ -0.58
APOBEC3A-201ENST00000249116 KLHL14Q9P2G3 628 aa11.41□□□□□ -0.58
APOBEC3A-201ENST00000249116 NOSIPQ9Y314 301 aaKnown RBP11.41□□□□□ -0.58
APOBEC3A-201ENST00000249116 WDR45Q9Y484 360 aa11.41□□□□□ -0.58
APOBEC3A-201ENST00000249116 CENPVL1A0A0U1RR11 272 aa11.4□□□□□ -0.58
APOBEC3A-201ENST00000249116 CIB4A0PJX0 185 aa11.4□□□□□ -0.58
APOBEC3A-201ENST00000249116 OR5H1A6NKK0 313 aa11.4□□□□□ -0.58
APOBEC3A-201ENST00000249116 NR5A2O00482 541 aa11.4□□□□□ -0.58
APOBEC3A-201ENST00000249116 GPR171O14626 319 aa11.4□□□□□ -0.58
APOBEC3A-201ENST00000249116 ABCD4O14678 606 aa11.4□□□□□ -0.58
APOBEC3A-201ENST00000249116 KIAA0513O60268 411 aa11.4□□□□□ -0.58
APOBEC3A-201ENST00000249116 PGM3O95394 542 aa11.4□□□□□ -0.58
APOBEC3A-201ENST00000249116 OR12D1P0DN82 309 aa11.4□□□□□ -0.58
APOBEC3A-201ENST00000249116 UQCRC2P22695 453 aa11.4□□□□□ -0.58
APOBEC3A-201ENST00000249116 GYS2P54840 703 aa11.4□□□□□ -0.58
APOBEC3A-201ENST00000249116 KRTAP1-1Q07627 177 aa11.4□□□□□ -0.58
APOBEC3A-201ENST00000249116 NRF1Q16656 503 aa11.4□□□□□ -0.58
APOBEC3A-201ENST00000249116 AGAP6Q5VW22 663 aa11.4□□□□□ -0.58
APOBEC3A-201ENST00000249116 FBXW9Q5XUX1 488 aa11.4□□□□□ -0.58
APOBEC3A-201ENST00000249116 SAXO2Q658L1 398 aa11.4□□□□□ -0.58
APOBEC3A-201ENST00000249116 ABLIM2Q6H8Q1 611 aa11.4□□□□□ -0.58
APOBEC3A-201ENST00000249116 BLOC1S3Q6QNY0 202 aa11.4□□□□□ -0.58
APOBEC3A-201ENST00000249116 TMEM108Q6UXF1 575 aa11.4□□□□□ -0.58
APOBEC3A-201ENST00000249116 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.4□□□□□ -0.58
APOBEC3A-201ENST00000249116 ZNF433Q8N7K0 673 aaPredicted RBP11.4□□□□□ -0.58
APOBEC3A-201ENST00000249116 MAPK1IP1LQ8NDC0 245 aa11.4□□□□□ -0.58
APOBEC3A-201ENST00000249116 PIGXQ8TBF5 258 aa11.4□□□□□ -0.58
APOBEC3A-201ENST00000249116 C10orf82Q8WW14 230 aa11.4□□□□□ -0.58
APOBEC3A-201ENST00000249116 VPS33AQ96AX1 596 aa11.4□□□□□ -0.58
APOBEC3A-201ENST00000249116 APH1AQ96BI3 265 aa11.4□□□□□ -0.58
APOBEC3A-201ENST00000249116 SLC35A5Q9BS91 424 aa11.4□□□□□ -0.58
APOBEC3A-201ENST00000249116 CCDC106Q9BWC9 280 aa11.4□□□□□ -0.58
APOBEC3A-201ENST00000249116 RABEP2Q9H5N1 569 aa11.4□□□□□ -0.58
APOBEC3A-201ENST00000249116 RMND5AQ9H871 391 aa11.4□□□□□ -0.58
APOBEC3A-201ENST00000249116 TMEM45AQ9NWC5 275 aa11.4□□□□□ -0.58
APOBEC3A-201ENST00000249116 CHRNA9Q9UGM1 479 aa11.4□□□□□ -0.58
APOBEC3A-201ENST00000249116 MGAT4BQ9UQ53 548 aa11.4□□□□□ -0.58
APOBEC3A-201ENST00000249116 IGKV3D-15A0A087WSY6 115 aa11.39□□□□□ -0.59
APOBEC3A-201ENST00000249116 CCDC154A6NI56 674 aa11.39□□□□□ -0.59
APOBEC3A-201ENST00000249116 CCT8L1PA6NM43 557 aa11.39□□□□□ -0.59
APOBEC3A-201ENST00000249116 SHISA9B4DS77 424 aa11.39□□□□□ -0.59
APOBEC3A-201ENST00000249116 RFXANKO14593 260 aa11.39□□□□□ -0.59
APOBEC3A-201ENST00000249116 DNPH1O43598 174 aa11.39□□□□□ -0.59
APOBEC3A-201ENST00000249116 TLX2O43763 284 aaPredicted RBP11.39□□□□□ -0.59
APOBEC3A-201ENST00000249116 RAMP1O60894 148 aa11.39□□□□□ -0.59
APOBEC3A-201ENST00000249116 RAD51DO75771 328 aa11.39□□□□□ -0.59
APOBEC3A-201ENST00000249116 PMS2P2O95744 297 aa11.39□□□□□ -0.59
APOBEC3A-201ENST00000249116 IGHV4-39P01824 125 aa11.39□□□□□ -0.59
APOBEC3A-201ENST00000249116 EDNRAP25101 427 aa11.39□□□□□ -0.59
APOBEC3A-201ENST00000249116 LSP1P33241 339 aa11.39□□□□□ -0.59
APOBEC3A-201ENST00000249116 RYKP34925 604 aa11.39□□□□□ -0.59
APOBEC3A-201ENST00000249116 CHI3L1P36222 383 aaPredicted RBP11.39□□□□□ -0.59
APOBEC3A-201ENST00000249116 PGM1P36871 562 aa11.39□□□□□ -0.59
APOBEC3A-201ENST00000249116 CLK1P49759 484 aaKnown RBP11.39□□□□□ -0.59
APOBEC3A-201ENST00000249116 KHKP50053 298 aa11.39□□□□□ -0.59
APOBEC3A-201ENST00000249116 CASP9P55211 416 aa11.39□□□□□ -0.59
APOBEC3A-201ENST00000249116 HPCAP84074 193 aa11.39□□□□□ -0.59
APOBEC3A-201ENST00000249116 MAPK14Q16539 360 aa11.39□□□□□ -0.59
APOBEC3A-201ENST00000249116 AGKQ53H12 422 aa11.39□□□□□ -0.59
APOBEC3A-201ENST00000249116 METTL21CQ5VZV1 264 aa11.39□□□□□ -0.59
APOBEC3A-201ENST00000249116 TYW3Q6IPR3 259 aaKnown RBP11.39□□□□□ -0.59
APOBEC3A-201ENST00000249116 TNFAIP8L2Q6P589 184 aaPredicted RBP11.39□□□□□ -0.59
APOBEC3A-201ENST00000249116 KLHL17Q6TDP4 642 aa11.39□□□□□ -0.59
APOBEC3A-201ENST00000249116 OLIG3Q7RTU3 272 aa11.39□□□□□ -0.59
APOBEC3A-201ENST00000249116 GRINAQ7Z429 371 aa11.39□□□□□ -0.59
APOBEC3A-201ENST00000249116 DTX2Q86UW9 622 aa11.39□□□□□ -0.59
APOBEC3A-201ENST00000249116 TRIML2Q8N7C3 387 aa11.39□□□□□ -0.59
APOBEC3A-201ENST00000249116 FAM71CQ8NEG0 241 aa11.39□□□□□ -0.59
APOBEC3A-201ENST00000249116 RAB8BQ92930 207 aa11.39□□□□□ -0.59
APOBEC3A-201ENST00000249116 ROPN1LQ96C74 230 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms