RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 GTPBP1O00178 669 aaKnown RBP21.3■■□□□ 1
SYNGR3-201ENST00000248121 WWP2O00308 870 aa21.3■■□□□ 1
SYNGR3-201ENST00000248121 MYL12AP19105 171 aa21.3■■□□□ 1
SYNGR3-201ENST00000248121 LCN1P31025 176 aa21.3■■□□□ 1
SYNGR3-201ENST00000248121 ZNF829Q3KNS6 432 aaPredicted RBP21.3■■□□□ 1
SYNGR3-201ENST00000248121 CPEB2Q7Z5Q1 589 aaKnown RBP21.3■■□□□ 1
SYNGR3-201ENST00000248121 SLC15A4Q8N697 577 aa21.3■■□□□ 1
SYNGR3-201ENST00000248121 ZNF485Q8NCK3 441 aa21.3■■□□□ 1
SYNGR3-201ENST00000248121 TM9SF4Q92544 642 aa21.3■■□□□ 1
SYNGR3-201ENST00000248121 SGTBQ96EQ0 304 aa21.3■■□□□ 1
SYNGR3-201ENST00000248121 SEMA4CQ9C0C4 833 aa21.3■■□□□ 1
SYNGR3-201ENST00000248121 RACGAP1Q9H0H5 632 aa21.3■■□□□ 1
SYNGR3-201ENST00000248121 PTRH2Q9Y3E5 179 aaKnown RBP21.3■■□□□ 1
SYNGR3-201ENST00000248121 PLD2O14939 933 aa21.3■■□□□ 1
SYNGR3-201ENST00000248121 ZNF117Q03924 483 aa21.3■■□□□ 1
SYNGR3-201ENST00000248121 ANKDD1AQ495B1 522 aa21.3■■□□□ 1
SYNGR3-201ENST00000248121 RTL4Q6ZR62 310 aa21.3■■□□□ 1
SYNGR3-201ENST00000248121 TMCO5AQ8N6Q1 288 aa21.3■■□□□ 1
SYNGR3-201ENST00000248121 SIRT6Q8N6T7 355 aa21.3■■□□□ 1
SYNGR3-201ENST00000248121 C17orf47Q8NEP4 570 aa21.3■■□□□ 1
SYNGR3-201ENST00000248121 THAP3Q8WTV1 239 aaPredicted RBP21.3■■□□□ 1
SYNGR3-201ENST00000248121 OTULINQ96BN8 352 aa21.3■■□□□ 1
SYNGR3-201ENST00000248121 HSPBAP1Q96EW2 488 aa21.3■■□□□ 1
SYNGR3-201ENST00000248121 SH3YL1Q96HL8 342 aaPredicted RBP21.3■■□□□ 1
SYNGR3-201ENST00000248121 WDR54Q9H977 334 aa21.3■■□□□ 1
SYNGR3-201ENST00000248121 GPN3Q9UHW5 284 aaPredicted RBP21.3■■□□□ 1
SYNGR3-201ENST00000248121 EXOSC1Q9Y3B2 195 aaKnown RBP21.3■■□□□ 1
SYNGR3-201ENST00000248121 RIF1Q5UIP0 2472 aaKnown RBP21.29■■□□□ 1
SYNGR3-201ENST00000248121 WNT4P56705 351 aa21.29■■□□□ 1
SYNGR3-201ENST00000248121 RAB15P59190 212 aa21.29■■□□□ 1
SYNGR3-201ENST00000248121 RPS18P62269 152 aaKnown RBP21.29■■□□□ 1
SYNGR3-201ENST00000248121 RNF4P78317 190 aa21.29■■□□□ 1
SYNGR3-201ENST00000248121 C1DQ13901 141 aaKnown RBP21.29■■□□□ 1
SYNGR3-201ENST00000248121 USP43Q70EL4 1123 aa21.29■■□□□ 1
SYNGR3-201ENST00000248121 MARCH3Q86UD3 253 aa21.29■■□□□ 1
SYNGR3-201ENST00000248121 PHC2Q8IXK0 858 aa21.29■■□□□ 1
SYNGR3-201ENST00000248121 KISS1RQ969F8 398 aaPredicted RBP21.29■■□□□ 1
SYNGR3-201ENST00000248121 TAAR9Q96RI9 348 aa21.29■■□□□ 1
SYNGR3-201ENST00000248121 PRRX2Q99811 253 aa21.29■■□□□ 1
SYNGR3-201ENST00000248121 LAT2Q9GZY6 243 aa21.29■■□□□ 1
SYNGR3-201ENST00000248121 NDUFB11Q9NX14 153 aa21.29■■□□□ 1
SYNGR3-201ENST00000248121 J3QRE1 110 aa21.28■■□□□ 1
SYNGR3-201ENST00000248121 ZNF354AO60765 605 aaPredicted RBP21.28■■□□□ 1
SYNGR3-201ENST00000248121 IGHA1P01876 353 aa21.28■■□□□ 1
SYNGR3-201ENST00000248121 NOS3P29474 1203 aa21.28■■□□□ 1
SYNGR3-201ENST00000248121 SLC1A3P43003 542 aa21.28■■□□□ 1
SYNGR3-201ENST00000248121 TUBA1BP68363 451 aa21.28■■□□□ 1
SYNGR3-201ENST00000248121 TUBA1AQ71U36 451 aa21.28■■□□□ 1
SYNGR3-201ENST00000248121 GLRX5Q86SX6 157 aa21.28■■□□□ 1
SYNGR3-201ENST00000248121 ADCK1Q86TW2 530 aa21.28■■□□□ 1
SYNGR3-201ENST00000248121 LHFPL3Q86UP9 236 aa21.28■■□□□ 1
SYNGR3-201ENST00000248121 NACC2Q96BF6 587 aa21.28■■□□□ 1
SYNGR3-201ENST00000248121 TRMT61AQ96FX7 289 aaKnown RBP21.28■■□□□ 1
SYNGR3-201ENST00000248121 H2AFY2Q9P0M6 372 aaPredicted RBP21.28■■□□□ 1
SYNGR3-201ENST00000248121 PCSK5Q92824 1860 aa21.28■■□□□ 1
SYNGR3-201ENST00000248121 ALG1L2C9J202 215 aa21.28■■□□□ 1
SYNGR3-201ENST00000248121 DLGAP3O95886 979 aa21.28■■□□□ 1
SYNGR3-201ENST00000248121 SLC9A3P48764 834 aa21.28■■□□□ 1
SYNGR3-201ENST00000248121 PNLIPRP2P54317 469 aa21.28■■□□□ 1
SYNGR3-201ENST00000248121 LIPKQ5VXJ0 399 aa21.28■■□□□ 1
SYNGR3-201ENST00000248121 MEPCEQ7L2J0 689 aaKnown RBP21.28■■□□□ 1
SYNGR3-201ENST00000248121 GID4Q8IVV7 300 aa21.28■■□□□ 1
SYNGR3-201ENST00000248121 SLC37A3Q8NCC5 494 aa21.28■■□□□ 1
SYNGR3-201ENST00000248121 GATAD2BQ8WXI9 593 aa21.28■■□□□ 1
SYNGR3-201ENST00000248121 DACH2Q96NX9 599 aa21.28■■□□□ 1
SYNGR3-201ENST00000248121 DEPDC7Q96QD5 511 aa21.28■■□□□ 1
SYNGR3-201ENST00000248121 CCDC187A0A096LP49 1063 aa21.27■■□□□ 1
SYNGR3-201ENST00000248121 A0A1W2PQD3 144 aa21.27■■□□□ 1
SYNGR3-201ENST00000248121 J3QRK9 145 aa21.27■■□□□ 1
SYNGR3-201ENST00000248121 MASP2O00187 686 aa21.27■■□□□ 1
SYNGR3-201ENST00000248121 PEPDP12955 493 aa21.27■■□□□ 1
SYNGR3-201ENST00000248121 SLC6A6P31641 620 aa21.27■■□□□ 1
SYNGR3-201ENST00000248121 CRYBB2P43320 205 aa21.27■■□□□ 1
SYNGR3-201ENST00000248121 ITGADQ13349 1161 aa21.27■■□□□ 1
SYNGR3-201ENST00000248121 SLC19A3Q9BZV2 496 aa21.27■■□□□ 1
SYNGR3-201ENST00000248121 SPRY4Q9C004 299 aa21.27■■□□□ 1
SYNGR3-201ENST00000248121 CHRNA9Q9UGM1 479 aa21.27■■□□□ 1
SYNGR3-201ENST00000248121 PPIEQ9UNP9 301 aaKnown RBP21.27■■□□□ 1
SYNGR3-201ENST00000248121 BAIAP2Q9UQB8 552 aa21.27■■□□□ 1
SYNGR3-201ENST00000248121 CELSR3Q9NYQ7 3312 aa21.27■■□□□ 1
SYNGR3-201ENST00000248121 CCDC182A6NF36 153 aa21.27■□□□□ 0.99
SYNGR3-201ENST00000248121 ELOA3DA6NLF2 546 aaPredicted RBP21.27■□□□□ 0.99
SYNGR3-201ENST00000248121 C9J4A7 227 aa21.27■□□□□ 0.99
SYNGR3-201ENST00000248121 MCIDASD6RGH6 385 aa21.27■□□□□ 0.99
SYNGR3-201ENST00000248121 ADAM10O14672 748 aa21.27■□□□□ 0.99
SYNGR3-201ENST00000248121 CELA2AP08217 269 aa21.27■□□□□ 0.99
SYNGR3-201ENST00000248121 FTH1P19P0C7X4 201 aa21.27■□□□□ 0.99
SYNGR3-201ENST00000248121 CPEP16870 476 aa21.27■□□□□ 0.99
SYNGR3-201ENST00000248121 IDUAP35475 653 aa21.27■□□□□ 0.99
SYNGR3-201ENST00000248121 EGR4Q05215 589 aa21.27■□□□□ 0.99
SYNGR3-201ENST00000248121 CRMP1Q14194 572 aa21.27■□□□□ 0.99
SYNGR3-201ENST00000248121 ELOA3BQ3SY89 546 aa21.27■□□□□ 0.99
SYNGR3-201ENST00000248121 TIMM50Q3ZCQ8 353 aa21.27■□□□□ 0.99
SYNGR3-201ENST00000248121 GXYLT1Q4G148 440 aa21.27■□□□□ 0.99
SYNGR3-201ENST00000248121 IGFN1Q86VF2 1251 aa21.27■□□□□ 0.99
SYNGR3-201ENST00000248121 ELOA3Q8NG57 546 aa21.27■□□□□ 0.99
SYNGR3-201ENST00000248121 OR5M3Q8NGP4 307 aa21.27■□□□□ 0.99
SYNGR3-201ENST00000248121 OR6Q1Q8NGQ2 317 aa21.27■□□□□ 0.99
SYNGR3-201ENST00000248121 BORCS5Q969J3 196 aa21.27■□□□□ 0.99
SYNGR3-201ENST00000248121 CCNL2Q96S94 520 aaPredicted RBP21.27■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms