RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 C17orf105B2RV13 164 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 MCIDASD6RGH6 385 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 J3QLW9 94 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 OGG1O15527 345 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 OR7A10O76100 309 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 IL33O95760 270 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 PNMTP11086 282 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 ZNF19P17023 458 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 DIO1P49895 249 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 SLC37A1P57057 533 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 NXPH1P58417 271 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 PRPS1P60891 318 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 E2F1Q01094 437 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 LGALS3BPQ08380 585 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 TAB1Q15750 504 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 SLC35D3Q5M8T2 416 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 LCN1P1Q5VSP4 162 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 WBP2NLQ6ICG8 309 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 ARL9Q6T311 187 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 PRR23CQ6ZRP0 262 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 Q8N402 240 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 DEFB119Q8N690 84 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 NPEPL1Q8NDH3 523 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 OR4K13Q8NH42 304 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 C1orf216Q8TAB5 229 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 ITFG2Q969R8 447 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 ZC3HAV1LQ96H79 300 aaKnown RBP14.82□□□□□ -0.04
UBE3D-201ENST00000237186 OR1F2PQ96R84 312 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 TTYH2Q9BSA4 534 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 NMNAT2Q9BZQ4 307 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 PPIL3Q9H2H8 161 aaKnown RBP14.82□□□□□ -0.04
UBE3D-201ENST00000237186 ST6GALNAC2Q9UJ37 374 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 CA14Q9ULX7 337 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 TMEM131Q92545 1883 aa14.82□□□□□ -0.04
UBE3D-201ENST00000237186 IGKV1D-42A0A075B6H8 117 aa14.81□□□□□ -0.04
UBE3D-201ENST00000237186 SYNDIG1LA6NDD5 238 aa14.81□□□□□ -0.04
UBE3D-201ENST00000237186 CCNKO75909 580 aa14.81□□□□□ -0.04
UBE3D-201ENST00000237186 TFP02787 698 aa14.81□□□□□ -0.04
UBE3D-201ENST00000237186 GYPBP06028 91 aa14.81□□□□□ -0.04
UBE3D-201ENST00000237186 SLC2A2P11168 524 aaPredicted RBP14.81□□□□□ -0.04
UBE3D-201ENST00000237186 SHC1P29353 583 aa14.81□□□□□ -0.04
UBE3D-201ENST00000237186 DBPQ10586 325 aaPredicted RBP14.81□□□□□ -0.04
UBE3D-201ENST00000237186 IL10RAQ13651 578 aa14.81□□□□□ -0.04
UBE3D-201ENST00000237186 NNATQ16517 81 aa14.81□□□□□ -0.04
UBE3D-201ENST00000237186 NDUFAF6Q330K2 333 aa14.81□□□□□ -0.04
UBE3D-201ENST00000237186 LRRC17Q8N6Y2 441 aa14.81□□□□□ -0.04
UBE3D-201ENST00000237186 ZNF527Q8NB42 609 aa14.81□□□□□ -0.04
UBE3D-201ENST00000237186 FAM98AQ8NCA5 519 aaKnown RBP14.81□□□□□ -0.04
UBE3D-201ENST00000237186 C17orf47Q8NEP4 570 aa14.81□□□□□ -0.04
UBE3D-201ENST00000237186 NLGN4YQ8NFZ3 816 aaPredicted RBP14.81□□□□□ -0.04
UBE3D-201ENST00000237186 OR6F1Q8NGZ6 308 aa14.81□□□□□ -0.04
UBE3D-201ENST00000237186 KCNJ15Q99712 375 aa14.81□□□□□ -0.04
UBE3D-201ENST00000237186 TMEM43Q9BTV4 400 aa14.81□□□□□ -0.04
UBE3D-201ENST00000237186 MOV10Q9HCE1 1003 aaKnown RBP14.81□□□□□ -0.04
UBE3D-201ENST00000237186 CUTCQ9NTM9 273 aa14.81□□□□□ -0.04
UBE3D-201ENST00000237186 IGKV3D-11A0A0A0MRZ8 115 aa14.8□□□□□ -0.04
UBE3D-201ENST00000237186 MEIOCA2RUB1 952 aa14.8□□□□□ -0.04
UBE3D-201ENST00000237186 IGKV3-11P04433 115 aa14.8□□□□□ -0.04
UBE3D-201ENST00000237186 MAOBP27338 520 aa14.8□□□□□ -0.04
UBE3D-201ENST00000237186 LCN1P31025 176 aa14.8□□□□□ -0.04
UBE3D-201ENST00000237186 ACTA2P62736 377 aa14.8□□□□□ -0.04
UBE3D-201ENST00000237186 ACTG2P63267 376 aa14.8□□□□□ -0.04
UBE3D-201ENST00000237186 P2RY14Q15391 338 aa14.8□□□□□ -0.04
UBE3D-201ENST00000237186 DEFB133Q30KQ1 61 aa14.8□□□□□ -0.04
UBE3D-201ENST00000237186 CDONQ4KMG0 1287 aa14.8□□□□□ -0.04
UBE3D-201ENST00000237186 PAMR1Q6UXH9 720 aa14.8□□□□□ -0.04
UBE3D-201ENST00000237186 TRILQ7L0X0 811 aa14.8□□□□□ -0.04
UBE3D-201ENST00000237186 SSX6Q7RTT6 188 aa14.8□□□□□ -0.04
UBE3D-201ENST00000237186 NUP54Q7Z3B4 507 aa14.8□□□□□ -0.04
UBE3D-201ENST00000237186 ATG4DQ86TL0 474 aaPredicted RBP14.8□□□□□ -0.04
UBE3D-201ENST00000237186 METTL27Q8N6F8 245 aaPredicted RBP14.8□□□□□ -0.04
UBE3D-201ENST00000237186 SDR9C7Q8NEX9 313 aa14.8□□□□□ -0.04
UBE3D-201ENST00000237186 OR14A16Q8NHC5 309 aa14.8□□□□□ -0.04
UBE3D-201ENST00000237186 CNN2Q99439 309 aaKnown RBP14.8□□□□□ -0.04
UBE3D-201ENST00000237186 MFRPQ9BY79 579 aa14.8□□□□□ -0.04
UBE3D-201ENST00000237186 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.8□□□□□ -0.04
UBE3D-201ENST00000237186 CYSLTR2Q9NS75 346 aa14.8□□□□□ -0.04
UBE3D-201ENST00000237186 B4DXG7 233 aa14.8□□□□□ -0.04
UBE3D-201ENST00000237186 LRRN3E7EW58 273 aa14.8□□□□□ -0.04
UBE3D-201ENST00000237186 SERPINA3P01011 423 aa14.8□□□□□ -0.04
UBE3D-201ENST00000237186 APEHP13798 732 aaKnown RBP14.8□□□□□ -0.04
UBE3D-201ENST00000237186 RORAP35398 523 aa14.8□□□□□ -0.04
UBE3D-201ENST00000237186 THBS2P35442 1172 aa14.8□□□□□ -0.04
UBE3D-201ENST00000237186 SLC3A1Q07837 685 aa14.8□□□□□ -0.04
UBE3D-201ENST00000237186 SKP2Q13309 424 aa14.8□□□□□ -0.04
UBE3D-201ENST00000237186 PON3Q15166 354 aa14.8□□□□□ -0.04
UBE3D-201ENST00000237186 TRIQKQ629K1 86 aa14.8□□□□□ -0.04
UBE3D-201ENST00000237186 PTCRAQ6ISU1 281 aaPredicted RBP14.8□□□□□ -0.04
UBE3D-201ENST00000237186 CEACAM19Q7Z692 300 aa14.8□□□□□ -0.04
UBE3D-201ENST00000237186 DUSP18Q8NEJ0 188 aa14.8□□□□□ -0.04
UBE3D-201ENST00000237186 OR5J2Q8NH18 312 aa14.8□□□□□ -0.04
UBE3D-201ENST00000237186 GHSRQ92847 366 aa14.8□□□□□ -0.04
UBE3D-201ENST00000237186 ZMYND19Q96E35 227 aaPredicted RBP14.8□□□□□ -0.04
UBE3D-201ENST00000237186 LRRN3Q9H3W5 708 aa14.8□□□□□ -0.04
UBE3D-201ENST00000237186 RBFOX1Q9NWB1 397 aaKnown RBP14.8□□□□□ -0.04
UBE3D-201ENST00000237186 SEMA5BQ9P283 1151 aa14.8□□□□□ -0.04
UBE3D-201ENST00000237186 ITGB1BP2Q9UKP3 347 aa14.8□□□□□ -0.04
UBE3D-201ENST00000237186 MRPS17Q9Y2R5 130 aaKnown RBP14.8□□□□□ -0.04
UBE3D-201ENST00000237186 NPFFR2Q9Y5X5 522 aa14.8□□□□□ -0.04
UBE3D-201ENST00000237186 TRAV1-2A0A0B4J238 106 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms