RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 CH25HO95992 272 aa17.93■□□□□ 0.46
TNFRSF1A-201ENST00000162749 FTH1P19P0C7X4 201 aa17.93■□□□□ 0.46
TNFRSF1A-201ENST00000162749 P2RX1P51575 399 aa17.93■□□□□ 0.46
TNFRSF1A-201ENST00000162749 IRF3Q14653 427 aa17.93■□□□□ 0.46
TNFRSF1A-201ENST00000162749 PGGHGQ32M88 737 aa17.93■□□□□ 0.46
TNFRSF1A-201ENST00000162749 ELOA3BQ3SY89 546 aa17.93■□□□□ 0.46
TNFRSF1A-201ENST00000162749 C16orf87Q6PH81 154 aa17.93■□□□□ 0.46
TNFRSF1A-201ENST00000162749 BTLAQ7Z6A9 289 aa17.93■□□□□ 0.46
TNFRSF1A-201ENST00000162749 FAM26EQ8N5C1 309 aa17.93■□□□□ 0.46
TNFRSF1A-201ENST00000162749 ESX1Q8N693 406 aa17.93■□□□□ 0.46
TNFRSF1A-201ENST00000162749 ELOA3Q8NG57 546 aa17.93■□□□□ 0.46
TNFRSF1A-201ENST00000162749 TTC9Q92623 222 aa17.93■□□□□ 0.46
TNFRSF1A-201ENST00000162749 Q96MT0 163 aa17.93■□□□□ 0.46
TNFRSF1A-201ENST00000162749 SLC19A3Q9BZV2 496 aa17.93■□□□□ 0.46
TNFRSF1A-201ENST00000162749 ADAM19Q9H013 955 aa17.93■□□□□ 0.46
TNFRSF1A-201ENST00000162749 UBQLN3Q9H347 655 aa17.93■□□□□ 0.46
TNFRSF1A-201ENST00000162749 ZNF160Q9HCG1 818 aa17.93■□□□□ 0.46
TNFRSF1A-201ENST00000162749 PALMDQ9NP74 551 aa17.93■□□□□ 0.46
TNFRSF1A-201ENST00000162749 ITGA10O75578 1167 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 FBXO45P0C2W1 286 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 FHL1Q13642 323 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 CBFBQ13951 182 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 OCLNQ16625 522 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 TIGD6Q17RP2 521 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 SYT14P1Q58G82 188 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 SLC25A30Q5SVS4 291 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 RPL13AP3Q6NVV1 102 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 THSD4Q6ZMP0 1018 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 NUP54Q7Z3B4 507 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 OAFQ86UD1 273 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 IGFN1Q86VF2 1251 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 MISPQ8IVT2 679 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 OR51A7Q8NH64 312 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 LRR1Q96L50 414 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 SLC38A2Q96QD8 506 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 GALNT9Q9HCQ5 603 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 AKIP1Q9NQ31 210 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 GPR52Q9Y2T5 361 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 SPAARA0A1B0GVQ0 90 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 B4DXG7 233 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 LRRN3E7EW58 273 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 PTP4A3O75365 173 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 TNFSF15O95150 251 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 RCBTB2O95199 551 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 PTHP01270 115 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 ADORA3P0DMS8 318 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 BMP7P18075 431 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 PGCP20142 388 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 TACR3P29371 465 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 OTX2P32243 289 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 SLC15A1P46059 708 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 NTRK2Q16620 822 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 BICRALQ6AI39 1079 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 SMARCD3Q6STE5 483 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 STX19Q8N4C7 294 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 OR10G3Q8NGC4 313 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 OR52L1Q8NGH7 329 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 TMEM163Q8TC26 289 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 SPACA9Q96E40 222 aaPredicted RBP17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 PRRG3Q9BZD7 231 aa17.92■□□□□ 0.46
TNFRSF1A-201ENST00000162749 ALPK2Q86TB3 2170 aa17.91■□□□□ 0.46
TNFRSF1A-201ENST00000162749 MASP2O00187 686 aa17.91■□□□□ 0.46
TNFRSF1A-201ENST00000162749 BHLHE40O14503 412 aa17.91■□□□□ 0.46
TNFRSF1A-201ENST00000162749 SURF4O15260 269 aa17.91■□□□□ 0.46
TNFRSF1A-201ENST00000162749 GAS1P54826 345 aa17.91■□□□□ 0.46
TNFRSF1A-201ENST00000162749 RPS15P62841 145 aaKnown RBP17.91■□□□□ 0.46
TNFRSF1A-201ENST00000162749 EGR4Q05215 589 aa17.91■□□□□ 0.46
TNFRSF1A-201ENST00000162749 SSPNQ14714 243 aa17.91■□□□□ 0.46
TNFRSF1A-201ENST00000162749 DGUOKQ16854 277 aa17.91■□□□□ 0.46
TNFRSF1A-201ENST00000162749 OR5M10Q6IEU7 315 aa17.91■□□□□ 0.46
TNFRSF1A-201ENST00000162749 NLGN4YQ8NFZ3 816 aaPredicted RBP17.91■□□□□ 0.46
TNFRSF1A-201ENST00000162749 ABTB1Q969K4 478 aaPredicted RBP17.91■□□□□ 0.46
TNFRSF1A-201ENST00000162749 TMEM43Q9BTV4 400 aa17.91■□□□□ 0.46
TNFRSF1A-201ENST00000162749 TAS2R16Q9NYV7 291 aa17.91■□□□□ 0.46
TNFRSF1A-201ENST00000162749 C2orf72A6NCS6 295 aa17.91■□□□□ 0.46
TNFRSF1A-201ENST00000162749 CLDN25C9JDP6 229 aa17.91■□□□□ 0.46
TNFRSF1A-201ENST00000162749 HCN1O60741 890 aa17.91■□□□□ 0.46
TNFRSF1A-201ENST00000162749 PFDN1O60925 122 aa17.91■□□□□ 0.46
TNFRSF1A-201ENST00000162749 F8A1P23610 371 aa17.91■□□□□ 0.46
TNFRSF1A-201ENST00000162749 GRK5P34947 590 aa17.91■□□□□ 0.46
TNFRSF1A-201ENST00000162749 C17orf67Q0P5P2 114 aa17.91■□□□□ 0.46
TNFRSF1A-201ENST00000162749 COL28A1Q2UY09 1125 aa17.91■□□□□ 0.46
TNFRSF1A-201ENST00000162749 LRRC17Q8N6Y2 441 aa17.91■□□□□ 0.46
TNFRSF1A-201ENST00000162749 SLIRPQ9GZT3 109 aaKnown RBP17.91■□□□□ 0.46
TNFRSF1A-201ENST00000162749 C12orf10Q9HB07 376 aa17.91■□□□□ 0.46
TNFRSF1A-201ENST00000162749 FAIMQ9NVQ4 179 aa17.91■□□□□ 0.46
TNFRSF1A-201ENST00000162749 CHCHD3Q9NX63 227 aaKnown RBP17.91■□□□□ 0.46
TNFRSF1A-201ENST00000162749 MED13Q9UHV7 2174 aa17.9■□□□□ 0.46
TNFRSF1A-201ENST00000162749 CDC40O60508 579 aaKnown RBP eCLIP17.9■□□□□ 0.46
TNFRSF1A-201ENST00000162749 WISP1O95388 367 aa17.9■□□□□ 0.46
TNFRSF1A-201ENST00000162749 SOX3P41225 446 aa17.9■□□□□ 0.46
TNFRSF1A-201ENST00000162749 DNASE1L3Q13609 305 aa17.9■□□□□ 0.46
TNFRSF1A-201ENST00000162749 MEDAGQ5VYS4 303 aa17.9■□□□□ 0.46
TNFRSF1A-201ENST00000162749 LINC00299Q6ZSB3 139 aa17.9■□□□□ 0.46
TNFRSF1A-201ENST00000162749 SLC46A3Q7Z3Q1 461 aa17.9■□□□□ 0.46
TNFRSF1A-201ENST00000162749 GPR119Q8TDV5 335 aa17.9■□□□□ 0.46
TNFRSF1A-201ENST00000162749 SGTBQ96EQ0 304 aa17.9■□□□□ 0.46
TNFRSF1A-201ENST00000162749 TNFRSF13CQ96RJ3 184 aa17.9■□□□□ 0.46
TNFRSF1A-201ENST00000162749 TEX12Q9BXU0 123 aa17.9■□□□□ 0.46
TNFRSF1A-201ENST00000162749 MCCC2Q9HCC0 563 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms