RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Khdc1aQ3UWR2 166 aa8.35□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Rnf207Q3V3A7 635 aa8.35□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Khdc1cQ4KL78 166 aa8.35□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Ankrd28Q505D1 1053 aa8.35□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Bst1Q64277 311 aa8.35□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Ripor1Q68FE6 1223 aa8.35□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Trim45Q6PFY8 580 aa8.35□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Chst10Q6PGK7 356 aa8.35□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Neil2Q6R2P8 329 aa8.35□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Ppp1r3cQ7TMB3 317 aa8.35□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Wdyhv1Q80WB5 209 aa8.35□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Vmn2r81Q80Z09 865 aa8.35□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Spag1Q80ZX8 901 aa8.35□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Dpep2Q8C255 478 aa8.35□□□□□ -1.07
Upf3b-201ENSMUST00000076265 A930004D18RikQ8C8W7 157 aa8.35□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Rnf170Q8CBG9 286 aa8.35□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Sdr9c7Q8K3P0 313 aa8.35□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Olfr315Q8VFG7 309 aa8.35□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Olfr1151Q8VFQ8 308 aa8.35□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Mrpl37Q921S7 423 aaKnown RBP8.35□□□□□ -1.07
Upf3b-201ENSMUST00000076265 HadhbQ99JY0 475 aaKnown RBP8.35□□□□□ -1.07
Upf3b-201ENSMUST00000076265 MagohbQ9CQL1 146 aa8.35□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Rec114Q9CWH4 259 aa8.35□□□□□ -1.07
Upf3b-201ENSMUST00000076265 PigkQ9CXY9 395 aa8.35□□□□□ -1.07
Upf3b-201ENSMUST00000076265 MrapQ9D159 127 aa8.35□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Tomm20lQ9D4V6 152 aa8.35□□□□□ -1.07
Upf3b-201ENSMUST00000076265 CutcQ9D8X1 272 aa8.35□□□□□ -1.07
Upf3b-201ENSMUST00000076265 1700123K08RikQ9D991 295 aa8.35□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Q9DAE7 121 aa8.35□□□□□ -1.07
Upf3b-201ENSMUST00000076265 PaicsQ9DCL9 425 aa8.35□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Olfr944Q9EQ91 311 aa8.35□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Cxcl15Q9WVL7 167 aa8.35□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Npc2Q9Z0J0 149 aa8.35□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Xpr1Q9Z0U0 695 aa8.35□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Myh7Q91Z83 1935 aa8.34□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Trav18A0A075B656 109 aa8.34□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Ugt1a5B2RT14 529 aa8.34□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Vmn1r7E9Q8T0 311 aa8.34□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Gpr33O88416 339 aa8.34□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Cd44P15379 778 aa8.34□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Gdf1P20863 357 aa8.34□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Id3P41133 119 aa8.34□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Slc11a1P41251 548 aa8.34□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Zdhhc9P59268 364 aa8.34□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Tle3Q08122 772 aaKnown RBP8.34□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Lrrn4clQ3TYX2 239 aa8.34□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Gtpbp2Q3UJK4 602 aa8.34□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Zfp772Q3UQL6 416 aa8.34□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Npepl1Q6NSR8 524 aa8.34□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Scd4Q6T707 353 aa8.34□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Arhgap15Q811M1 481 aa8.34□□□□□ -1.07
Upf3b-201ENSMUST00000076265 4933402J07RikQ8BHX0 270 aa8.34□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Fam180aQ8BR21 173 aa8.34□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Fam131aQ8BWU3 361 aa8.34□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Clptm1lQ8BXA5 539 aa8.34□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Proser2Q8C5R2 471 aa8.34□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Q8C5S3 137 aa8.34□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Nle1Q8VEJ4 485 aa8.34□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Prb1Q91X93 504 aa8.34□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Pcdhb1Q91Y08 818 aa8.34□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Rab29Q91YQ1 204 aa8.34□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Fam69bQ99ML4 431 aa8.34□□□□□ -1.07
Upf3b-201ENSMUST00000076265 2410137M14RikQ9CWF0 162 aa8.34□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Dynll2Q9D0M5 89 aa8.34□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Fbxo25Q9D2Y6 357 aa8.34□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Znf593Q9DB42 134 aaKnown RBP8.34□□□□□ -1.07
Upf3b-201ENSMUST00000076265 Olfr789A0A1L1SV77 312 aa8.34□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Gm27029A2A4P4 543 aa8.34□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Ssxb9A2BI93 185 aa8.34□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Gm8180E9PXN0 145 aa8.34□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Gm21738J3QP72 227 aa8.34□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Tnfrsf11bO08712 401 aa8.34□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Aif1O70200 147 aa8.34□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Tulp3O88413 460 aa8.34□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Il1r1P13504 576 aa8.34□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Fgf6P21658 208 aa8.34□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Thbs1P35441 1170 aa8.34□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Pxmp2P42925 194 aa8.34□□□□□ -1.08
Upf3b-201ENSMUST00000076265 S100a13P97352 98 aa8.34□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Ssbp4Q3U4B1 363 aa8.34□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Grhl3Q5FWH3 603 aa8.34□□□□□ -1.08
Upf3b-201ENSMUST00000076265 OmpQ64288 163 aa8.34□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Cyp3a11Q64459 504 aa8.34□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Adamts16Q69Z28 1222 aa8.34□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Tm7sf2Q71KT5 418 aa8.34□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Enkd1Q7TSV9 346 aa8.34□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Rhot1Q8BG51 631 aa8.34□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Klf8Q8BLM0 355 aaKnown RBP8.34□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Nipal1Q8BMW7 416 aa8.34□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Nudt9Q8BVU5 350 aa8.34□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Babam2Q8K3W0 383 aa8.34□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Slc35f5Q8R314 524 aa8.34□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Tmem106aQ8VC04 261 aa8.34□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Olfr47Q8VF18 321 aa8.34□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Asb9Q91ZT8 290 aa8.34□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Fads1Q920L1 447 aa8.34□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Q99K99 313 aa8.34□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Flywch2Q9CQE9 139 aa8.34□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Rtl8bQ9D1F0 113 aa8.34□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Fank1Q9DAM9 344 aa8.34□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 34.7 ms