RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Thumpd1Q99J36 350 aaKnown RBP13.9□□□□□ -0.18
Nup54-201ENSMUST00000038514 NansQ99J77 359 aa13.9□□□□□ -0.18
Nup54-201ENSMUST00000038514 Tktl1Q99MX0 595 aa13.9□□□□□ -0.18
Nup54-201ENSMUST00000038514 NaxdQ9CZ42 343 aa13.9□□□□□ -0.18
Nup54-201ENSMUST00000038514 DlstQ9D2G2 454 aa13.9□□□□□ -0.18
Nup54-201ENSMUST00000038514 Slc46a3Q9DC26 460 aa13.9□□□□□ -0.18
Nup54-201ENSMUST00000038514 Spry1Q9QXV9 313 aa13.9□□□□□ -0.18
Nup54-201ENSMUST00000038514 Fbxw5Q9QXW2 573 aa13.9□□□□□ -0.18
Nup54-201ENSMUST00000038514 Gm21854A0A087WNM4 232 aa13.9□□□□□ -0.18
Nup54-201ENSMUST00000038514 Rpl7a-ps5A0A140T8L3 268 aa13.9□□□□□ -0.18
Nup54-201ENSMUST00000038514 Gm7714E9Q079 131 aa13.9□□□□□ -0.18
Nup54-201ENSMUST00000038514 Vmn1r55E9Q8I6 310 aa13.9□□□□□ -0.18
Nup54-201ENSMUST00000038514 Plscr5J3QM92 274 aa13.9□□□□□ -0.18
Nup54-201ENSMUST00000038514 IghgP01863 330 aa13.9□□□□□ -0.18
Nup54-201ENSMUST00000038514 FshrP35378 692 aa13.9□□□□□ -0.18
Nup54-201ENSMUST00000038514 Fam98aQ3TJZ6 515 aaKnown RBP13.9□□□□□ -0.18
Nup54-201ENSMUST00000038514 Fzd3Q61086 666 aa13.9□□□□□ -0.18
Nup54-201ENSMUST00000038514 Laptm5Q61168 261 aa13.9□□□□□ -0.18
Nup54-201ENSMUST00000038514 Acvr1bQ61271 505 aa13.9□□□□□ -0.18
Nup54-201ENSMUST00000038514 HlxQ61670 476 aa13.9□□□□□ -0.18
Nup54-201ENSMUST00000038514 B430306N03RikQ6QX36 289 aa13.9□□□□□ -0.18
Nup54-201ENSMUST00000038514 Fem1abQ8C0T1 654 aa13.9□□□□□ -0.18
Nup54-201ENSMUST00000038514 GatcQ8CBY0 155 aa13.9□□□□□ -0.18
Nup54-201ENSMUST00000038514 Lyrm4Q8K215 91 aa13.9□□□□□ -0.18
Nup54-201ENSMUST00000038514 Olfr769Q8K501 312 aa13.9□□□□□ -0.18
Nup54-201ENSMUST00000038514 Ccm2lQ8VCC6 481 aa13.9□□□□□ -0.18
Nup54-201ENSMUST00000038514 Alg5Q9DB25 324 aa13.9□□□□□ -0.18
Nup54-201ENSMUST00000038514 Pkmyt1Q9ESG9 490 aa13.9□□□□□ -0.18
Nup54-201ENSMUST00000038514 Plscr3Q9JIZ9 296 aa13.9□□□□□ -0.18
Nup54-201ENSMUST00000038514 Dennd4cA6H8H2 1906 aa13.9□□□□□ -0.18
Nup54-201ENSMUST00000038514 Greb1Q3UHK3 1954 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Olfr1314A2AVL6 312 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Gm3594E9Q2A7 267 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Coq10aE9Q3H6 259 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Msl3l2G3X992 371 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Vmn1r168K7N6B6 309 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Socs1O35716 212 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 F10O88947 481 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Tead1P30051 426 aaKnown RBP13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Rps7P62082 194 aaKnown RBP13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Tead3P70210 439 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Kcnk6Q3TBV4 313 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Sidt1Q6AXF6 827 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 DraxinQ6PAL1 343 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Zbtb46Q8BID6 600 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Slc43a1Q8BSM7 564 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Clrn1Q8K445 232 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Tor2aQ8R1J9 321 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Olfr1390Q8VGW9 311 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Hdac8Q8VH37 377 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Asb18Q8VHA6 467 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Oasl1Q8VI94 511 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Egln3Q91UZ4 239 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Hemk1Q921L7 340 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 4930503E14RikQ9D583 177 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Med11Q9D8C6 117 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Sectm1bQ9JL59 212 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Kif26bQ7TNC6 2112 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Olfr1164A2AVT5 326 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 SrsxB2RZI1 361 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Scgb2b3D2XZ38 112 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Gm45062E0CZ38 131 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Btbd2E9PUS2 523 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Hps1O08983 704 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Nipsnap2O55126 281 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 SnrpbP27048 231 aaKnown RBP13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Egfbp2P36368 261 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Evx2P49749 475 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Serpine2Q07235 397 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Ankrd53Q3V0J4 497 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Pcdh19Q80TF3 1145 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Zbtb26Q8C8S0 451 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Eipr1Q8K0G5 386 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Alkbh3Q8K1E6 286 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 MepceQ8K3A9 666 aaKnown RBP13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Sorcs1Q9JLC4 1167 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Ccl27Q9Z1X0 120 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Nup214Q80U93 2085 aa13.89□□□□□ -0.19
Nup54-201ENSMUST00000038514 Lrrc72A0A1Y7VMI0 288 aa13.88□□□□□ -0.19
Nup54-201ENSMUST00000038514 Serpina3jD3Z451 420 aa13.88□□□□□ -0.19
Nup54-201ENSMUST00000038514 Vmn1r177E9PXM3 309 aa13.88□□□□□ -0.19
Nup54-201ENSMUST00000038514 Pmm1O35621 262 aa13.88□□□□□ -0.19
Nup54-201ENSMUST00000038514 Il1bP10749 269 aa13.88□□□□□ -0.19
Nup54-201ENSMUST00000038514 CbfbQ08024 187 aa13.88□□□□□ -0.19
Nup54-201ENSMUST00000038514 Lingo2Q3URE9 606 aa13.88□□□□□ -0.19
Nup54-201ENSMUST00000038514 St6gal1Q64685 403 aa13.88□□□□□ -0.19
Nup54-201ENSMUST00000038514 Klhl12Q8BZM0 568 aa13.88□□□□□ -0.19
Nup54-201ENSMUST00000038514 Nsun3Q8CCT7 348 aa13.88□□□□□ -0.19
Nup54-201ENSMUST00000038514 Dlgap5Q8K4R9 808 aa13.88□□□□□ -0.19
Nup54-201ENSMUST00000038514 HpgdQ8VCC1 269 aa13.88□□□□□ -0.19
Nup54-201ENSMUST00000038514 NtmQ99PJ0 344 aa13.88□□□□□ -0.19
Nup54-201ENSMUST00000038514 Rab3bQ9CZT8 219 aa13.88□□□□□ -0.19
Nup54-201ENSMUST00000038514 Lcn9Q9D267 178 aa13.88□□□□□ -0.19
Nup54-201ENSMUST00000038514 4933436I01RikQ9D3T1 429 aa13.88□□□□□ -0.19
Nup54-201ENSMUST00000038514 Eif3fQ9DCH4 361 aa13.88□□□□□ -0.19
Nup54-201ENSMUST00000038514 Dgat2Q9DCV3 388 aa13.88□□□□□ -0.19
Nup54-201ENSMUST00000038514 Dkk3Q9QUN9 349 aa13.88□□□□□ -0.19
Nup54-201ENSMUST00000038514 Uchl1Q9R0P9 223 aa13.88□□□□□ -0.19
Nup54-201ENSMUST00000038514 Phf3B2RQG2 2025 aaKnown RBP13.88□□□□□ -0.19
Nup54-201ENSMUST00000038514 Xlr4aA2BI40 215 aa13.88□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 86.7 ms