RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Slc22a21Q9WTN6 564 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Igkv5-39A0A0G2JDV4 115 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Cd209fD3Z1H5 274 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Klk1b16P04071 261 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Fgf3P05524 245 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 GzmeP08884 248 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 IapP24822 559 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Dmrtc1bQ2PMX6 267 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Cmpk2Q3U5Q7 447 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 GcgrQ61606 485 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Fam189a1Q6A044 515 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Ndrg4Q8BTG7 352 aaKnown RBP9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Lrrtm3Q8BZ81 582 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Ier5lQ99J55 406 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Mrps18bQ99N84 254 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 P2ry12Q9CPV9 347 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Zmynd19Q9CQG3 227 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Q9D5Y0 588 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 CalyQ9DCA7 226 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Spry1Q9QXV9 313 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Naa10Q9QY36 235 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Pex14Q9R0A0 376 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Gm11634A0A1B0GSX1 172 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Xpnpep2B1AVD1 674 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 SvaE9PX96 165 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Hsd17b12O70503 312 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Thbs1P35441 1170 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Arf3P61205 181 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Tmem207P86045 143 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Taar2Q5QD17 339 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Chst9Q76EC5 413 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Agfg1Q8K2K6 561 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Olfr1093Q8VF14 322 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Asb9Q91ZT8 290 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 HadhbQ99JY0 475 aaKnown RBP9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Nop16Q9CPT5 178 aaKnown RBP9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Upk1aQ9D132 257 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Zbp1Q9QY24 411 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Frmpd3A0A140LIW3 1774 aa9.64□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Gm21854A0A087WNM4 232 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Esp36G3UZD8 160 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Tssk2O54863 358 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Gpr50O88495 591 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Klkb1P26262 638 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Ly6dP35459 127 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Hes5P70120 167 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Cobll1Q3UMF0 1273 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Epha1Q60750 977 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Adh7Q64437 374 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Spaca9Q7TPM5 168 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Zbtb37Q8C3U9 504 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Slc22a22Q8R0S9 554 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Olfr1395Q8VGD7 317 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Asb12Q9D738 308 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Rp2Q9EPK2 347 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Tlr1Q9EPQ1 795 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Prl3c1Q9QUN5 212 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Uchl1Q9R0P9 223 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 RbmxQ9WV02 391 aaKnown RBP9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Olfr1234A2AVK5 314 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Gm14862B1AV28 81 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Hdac3O88895 424 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Hoxc8P09025 242 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Rpl7P14148 270 aaKnown RBP9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Klk1P15947 261 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Bdkrb2P32299 392 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Apoc3P33622 99 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Fut4Q11127 433 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Tmem64Q3U145 381 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Nox3Q672J9 568 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 EnkurQ6SP97 255 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Fbxo22Q78JE5 402 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Rbm45Q8BHN5 476 aaKnown RBP9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Slc35c1Q8BLX4 363 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 NarsQ8BP47 559 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 RbksQ8R1Q9 323 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Vmn1r6Q8R2D4 303 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Nkd2Q8VE28 461 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Mrpl37Q921S7 423 aaKnown RBP9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Fam3bQ9D309 235 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Slco6d1Q9D5W6 683 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Upk3aQ9JKX8 287 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Zfp599E9PWP1 548 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Olfr294F7CWV4 335 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Vmn2r99H3BK37 856 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Best1O88870 551 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Itga5P11688 1053 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Msx1P13297 303 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Gm12258Q5NC63 627 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Slc35a1Q61420 336 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Zfp866Q6PGD2 520 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Katnb1Q8BG40 658 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Mboat2Q8R3I2 519 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Olfr1043Q8VFK4 314 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Acy1Q99JW2 408 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 PsphQ99LS3 225 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Sucnr1Q99MT6 317 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Emc7Q9EP72 241 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Sorcs1Q9JLC4 1167 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Olfr1156A2AVC3 323 aa9.63□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 33.8 ms