RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 BDH2Q9BUT1 245 aa11.12□□□□□ -0.63
LINC00339-213ENST00000642137 ZNF426Q9BUY5 554 aa11.12□□□□□ -0.63
LINC00339-213ENST00000642137 POTEKPQ9BYX7 375 aa11.12□□□□□ -0.63
LINC00339-213ENST00000642137 SLC6A15Q9H2J7 730 aa11.12□□□□□ -0.63
LINC00339-213ENST00000642137 EXO5Q9H790 373 aa11.12□□□□□ -0.63
LINC00339-213ENST00000642137 MAN2C1Q9NTJ4 1040 aa11.12□□□□□ -0.63
LINC00339-213ENST00000642137 CHRNA9Q9UGM1 479 aa11.12□□□□□ -0.63
LINC00339-213ENST00000642137 SLC6A5Q9Y345 797 aa11.12□□□□□ -0.63
LINC00339-213ENST00000642137 TESMINQ9Y4I5 508 aa11.12□□□□□ -0.63
LINC00339-213ENST00000642137 HTR3EA5X5Y0 456 aa11.11□□□□□ -0.63
LINC00339-213ENST00000642137 GJE1A6NN92 205 aa11.11□□□□□ -0.63
LINC00339-213ENST00000642137 TTLL8A6PVC2 850 aa11.11□□□□□ -0.63
LINC00339-213ENST00000642137 TNFRSF11BO00300 401 aa11.11□□□□□ -0.63
LINC00339-213ENST00000642137 AQP7O14520 342 aa11.11□□□□□ -0.63
LINC00339-213ENST00000642137 WISP2O76076 250 aa11.11□□□□□ -0.63
LINC00339-213ENST00000642137 LDLRP01130 860 aa11.11□□□□□ -0.63
LINC00339-213ENST00000642137 IGF2P01344 180 aa11.11□□□□□ -0.63
LINC00339-213ENST00000642137 CCNA2P20248 432 aa11.11□□□□□ -0.63
LINC00339-213ENST00000642137 FUT4P22083 530 aa11.11□□□□□ -0.63
LINC00339-213ENST00000642137 TCEA1P23193 301 aaKnown RBP11.11□□□□□ -0.63
LINC00339-213ENST00000642137 DNAJA1P31689 397 aaKnown RBP11.11□□□□□ -0.63
LINC00339-213ENST00000642137 LIMS1P48059 325 aa11.11□□□□□ -0.63
LINC00339-213ENST00000642137 DCST1Q5T197 706 aa11.11□□□□□ -0.63
LINC00339-213ENST00000642137 C3orf33Q6P1S2 294 aa11.11□□□□□ -0.63
LINC00339-213ENST00000642137 POMZP3Q6PJE2 187 aa11.11□□□□□ -0.63
LINC00339-213ENST00000642137 C5orf46Q6UWT4 87 aa11.11□□□□□ -0.63
LINC00339-213ENST00000642137 RRM2BQ7LG56 351 aa11.11□□□□□ -0.63
LINC00339-213ENST00000642137 LILRA2Q8N149 483 aa11.11□□□□□ -0.63
LINC00339-213ENST00000642137 GHDCQ8N2G8 530 aa11.11□□□□□ -0.63
LINC00339-213ENST00000642137 LINC00471Q8N535 108 aa11.11□□□□□ -0.63
LINC00339-213ENST00000642137 TMEM239Q8WW34 195 aa11.11□□□□□ -0.63
LINC00339-213ENST00000642137 ACOT11Q8WXI4 607 aaPredicted RBP11.11□□□□□ -0.63
LINC00339-213ENST00000642137 DDIT4LQ96D03 193 aa11.11□□□□□ -0.63
LINC00339-213ENST00000642137 ALPK1Q96QP1 1244 aa11.11□□□□□ -0.63
LINC00339-213ENST00000642137 EPYCQ99645 322 aa11.11□□□□□ -0.63
LINC00339-213ENST00000642137 FUZQ9BT04 418 aa11.11□□□□□ -0.63
LINC00339-213ENST00000642137 SLC19A3Q9BZV2 496 aa11.11□□□□□ -0.63
LINC00339-213ENST00000642137 DCLRE1BQ9H816 532 aa11.11□□□□□ -0.63
LINC00339-213ENST00000642137 REEP1Q9H902 201 aa11.11□□□□□ -0.63
LINC00339-213ENST00000642137 ASF1BQ9NVP2 202 aa11.11□□□□□ -0.63
LINC00339-213ENST00000642137 TMCC3Q9ULS5 477 aa11.11□□□□□ -0.63
LINC00339-213ENST00000642137 RRP15Q9Y3B9 282 aaKnown RBP11.11□□□□□ -0.63
LINC00339-213ENST00000642137 LIPGQ9Y5X9 500 aa11.11□□□□□ -0.63
LINC00339-213ENST00000642137 LYVE1Q9Y5Y7 322 aa11.11□□□□□ -0.63
LINC00339-213ENST00000642137 CFAP47Q6ZTR5 3102 aa11.11□□□□□ -0.63
LINC00339-213ENST00000642137 PKD1L2Q7Z442 2459 aa11.1□□□□□ -0.63
LINC00339-213ENST00000642137 A0A087WUU8 490 aa11.1□□□□□ -0.63
LINC00339-213ENST00000642137 OR14I1A6ND48 311 aa11.1□□□□□ -0.63
LINC00339-213ENST00000642137 H3BML4 177 aa11.1□□□□□ -0.63
LINC00339-213ENST00000642137 NPIPB7O75200 414 aa11.1□□□□□ -0.63
LINC00339-213ENST00000642137 IL11P20809 199 aa11.1□□□□□ -0.63
LINC00339-213ENST00000642137 STARP49675 285 aa11.1□□□□□ -0.63
LINC00339-213ENST00000642137 LHX2P50458 406 aa11.1□□□□□ -0.63
LINC00339-213ENST00000642137 TDGF1P3P51864 188 aa11.1□□□□□ -0.63
LINC00339-213ENST00000642137 ARHGDIAP52565 204 aa11.1□□□□□ -0.63
LINC00339-213ENST00000642137 EGR4Q05215 589 aa11.1□□□□□ -0.63
LINC00339-213ENST00000642137 NFATC3Q12968 1075 aa11.1□□□□□ -0.63
LINC00339-213ENST00000642137 TMEM176BQ3YBM2 270 aaPredicted RBP11.1□□□□□ -0.63
LINC00339-213ENST00000642137 HMBOX1Q6NT76 420 aa11.1□□□□□ -0.63
LINC00339-213ENST00000642137 ARHGAP11AQ6P4F7 1023 aa11.1□□□□□ -0.63
LINC00339-213ENST00000642137 PODNL1Q6PEZ8 512 aa11.1□□□□□ -0.63
LINC00339-213ENST00000642137 WDR88Q6ZMY6 472 aa11.1□□□□□ -0.63
LINC00339-213ENST00000642137 AMIGO2Q86SJ2 522 aa11.1□□□□□ -0.63
LINC00339-213ENST00000642137 OR4C15Q8NGM1 316 aa11.1□□□□□ -0.63
LINC00339-213ENST00000642137 OR6S1Q8NH40 331 aa11.1□□□□□ -0.63
LINC00339-213ENST00000642137 OR52J3Q8NH60 311 aa11.1□□□□□ -0.63
LINC00339-213ENST00000642137 SLC7A13Q8TCU3 470 aa11.1□□□□□ -0.63
LINC00339-213ENST00000642137 TMEM255BQ8WV15 326 aa11.1□□□□□ -0.63
LINC00339-213ENST00000642137 SARAFQ96BY9 339 aa11.1□□□□□ -0.63
LINC00339-213ENST00000642137 NRBF2Q96F24 287 aa11.1□□□□□ -0.63
LINC00339-213ENST00000642137 CENPNQ96H22 339 aaPredicted RBP11.1□□□□□ -0.63
LINC00339-213ENST00000642137 TIMP4Q99727 224 aa11.1□□□□□ -0.63
LINC00339-213ENST00000642137 PKP2Q99959 881 aa11.1□□□□□ -0.63
LINC00339-213ENST00000642137 SLX1AQ9BQ83 275 aa11.1□□□□□ -0.63
LINC00339-213ENST00000642137 TSPAN10Q9H1Z9 355 aaPredicted RBP11.1□□□□□ -0.63
LINC00339-213ENST00000642137 NTN4Q9HB63 628 aa11.1□□□□□ -0.63
LINC00339-213ENST00000642137 MED31Q9Y3C7 131 aa11.1□□□□□ -0.63
LINC00339-213ENST00000642137 HDGFL3Q9Y3E1 203 aa11.1□□□□□ -0.63
LINC00339-213ENST00000642137 SAMHD1Q9Y3Z3 626 aaKnown RBP11.1□□□□□ -0.63
LINC00339-213ENST00000642137 DNAJC13O75165 2243 aa11.09□□□□□ -0.63
LINC00339-213ENST00000642137 ZNF407Q9C0G0 2248 aa11.09□□□□□ -0.63
LINC00339-213ENST00000642137 IGKV1D-42A0A075B6H8 117 aa11.09□□□□□ -0.63
LINC00339-213ENST00000642137 TRBV4-1A0A0J9YWV2 114 aa11.09□□□□□ -0.63
LINC00339-213ENST00000642137 A0A1B0GTH9 108 aa11.09□□□□□ -0.63
LINC00339-213ENST00000642137 SH3PXD2BA1X283 911 aa11.09□□□□□ -0.63
LINC00339-213ENST00000642137 OR2T1O43869 369 aa11.09□□□□□ -0.63
LINC00339-213ENST00000642137 MGRN1O60291 552 aa11.09□□□□□ -0.63
LINC00339-213ENST00000642137 CPN1P15169 458 aa11.09□□□□□ -0.63
LINC00339-213ENST00000642137 POU3F2P20265 443 aaPredicted RBP11.09□□□□□ -0.63
LINC00339-213ENST00000642137 FPR1P21462 350 aa11.09□□□□□ -0.63
LINC00339-213ENST00000642137 CLDN18P56856 261 aa11.09□□□□□ -0.63
LINC00339-213ENST00000642137 PRKCDQ05655 676 aa11.09□□□□□ -0.63
LINC00339-213ENST00000642137 CRYZQ08257 329 aaKnown RBP11.09□□□□□ -0.63
LINC00339-213ENST00000642137 FOXD4Q12950 439 aaPredicted RBP11.09□□□□□ -0.63
LINC00339-213ENST00000642137 RIPK1Q13546 671 aa11.09□□□□□ -0.63
LINC00339-213ENST00000642137 MICAQ29983 383 aa11.09□□□□□ -0.63
LINC00339-213ENST00000642137 EXOC3L2Q2M3D2 409 aa11.09□□□□□ -0.63
LINC00339-213ENST00000642137 SYT14P1Q58G82 188 aa11.09□□□□□ -0.63
LINC00339-213ENST00000642137 FGD3Q5JSP0 725 aa11.09□□□□□ -0.63
LINC00339-213ENST00000642137 PDSS1Q5T2R2 415 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms