RNA–Protein interactions for RNA: ENST00000639501.1

PMS1-222, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-222ENST00000639501 HS6ST2Q96MM7 605 aa18.94■□□□□ 0.62
PMS1-222ENST00000639501 TMPRSS13Q9BYE2 586 aa18.94■□□□□ 0.62
PMS1-222ENST00000639501 ARL6Q9H0F7 186 aa18.94■□□□□ 0.62
PMS1-222ENST00000639501 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.94■□□□□ 0.62
PMS1-222ENST00000639501 KPNA3O00505 521 aaPredicted RBP18.94■□□□□ 0.62
PMS1-222ENST00000639501 KHDRBS3O75525 346 aaKnown RBP18.94■□□□□ 0.62
PMS1-222ENST00000639501 CBX7O95931 251 aa18.94■□□□□ 0.62
PMS1-222ENST00000639501 APOC3P02656 99 aa18.94■□□□□ 0.62
PMS1-222ENST00000639501 HTR2AP28223 471 aa18.94■□□□□ 0.62
PMS1-222ENST00000639501 MAGEB1P43366 347 aa18.94■□□□□ 0.62
PMS1-222ENST00000639501 UBE2MP61081 183 aaKnown RBP18.94■□□□□ 0.62
PMS1-222ENST00000639501 HEPHL1Q6MZM0 1159 aa18.94■□□□□ 0.62
PMS1-222ENST00000639501 BAIAP2L2Q6UXY1 529 aa18.94■□□□□ 0.62
PMS1-222ENST00000639501 ASPGQ86U10 573 aa18.94■□□□□ 0.62
PMS1-222ENST00000639501 SLC16A11Q8NCK7 471 aa18.94■□□□□ 0.62
PMS1-222ENST00000639501 GIMAP5Q96F15 307 aa18.94■□□□□ 0.62
PMS1-222ENST00000639501 CD180Q99467 661 aa18.94■□□□□ 0.62
PMS1-222ENST00000639501 PDCD1LG2Q9BQ51 273 aa18.94■□□□□ 0.62
PMS1-222ENST00000639501 ZNF416Q9BWM5 594 aa18.94■□□□□ 0.62
PMS1-222ENST00000639501 TRAV27A0A087WT01 109 aa18.93■□□□□ 0.62
PMS1-222ENST00000639501 FAM74A7A6NL05 159 aa18.93■□□□□ 0.62
PMS1-222ENST00000639501 HOXA2O43364 376 aa18.93■□□□□ 0.62
PMS1-222ENST00000639501 UCHL1P09936 223 aa18.93■□□□□ 0.62
PMS1-222ENST00000639501 GKN3PP0CG01 181 aa18.93■□□□□ 0.62
PMS1-222ENST00000639501 MAT2AP31153 395 aaKnown RBP18.93■□□□□ 0.62
PMS1-222ENST00000639501 H2BFSP57053 126 aa18.93■□□□□ 0.62
PMS1-222ENST00000639501 ERVK-21P61565 698 aa18.93■□□□□ 0.62
PMS1-222ENST00000639501 PUS10Q3MIT2 529 aaKnown RBP18.93■□□□□ 0.62
PMS1-222ENST00000639501 FAM74A3Q4VXF1 159 aa18.93■□□□□ 0.62
PMS1-222ENST00000639501 FAM111BQ6SJ93 734 aa18.93■□□□□ 0.62
PMS1-222ENST00000639501 OR6V1Q8N148 313 aa18.93■□□□□ 0.62
PMS1-222ENST00000639501 ZNF454Q8N9F8 522 aa18.93■□□□□ 0.62
PMS1-222ENST00000639501 PELI1Q96FA3 418 aa18.93■□□□□ 0.62
PMS1-222ENST00000639501 LINC00615Q96LM1 132 aaPredicted RBP18.93■□□□□ 0.62
PMS1-222ENST00000639501 NPAS1Q99742 590 aa18.93■□□□□ 0.62
PMS1-222ENST00000639501 CLDND1Q9NY35 253 aa18.93■□□□□ 0.62
PMS1-222ENST00000639501 GLS2Q9UI32 602 aa18.93■□□□□ 0.62
PMS1-222ENST00000639501 SNRNP200O75643 2136 aaKnown RBP18.93■□□□□ 0.62
PMS1-222ENST00000639501 CREBL2O60519 120 aaPredicted RBP18.93■□□□□ 0.62
PMS1-222ENST00000639501 SELENOFO60613 162 aa18.93■□□□□ 0.62
PMS1-222ENST00000639501 IGF2P01344 180 aa18.93■□□□□ 0.62
PMS1-222ENST00000639501 TYRP1P17643 537 aa18.93■□□□□ 0.62
PMS1-222ENST00000639501 NRSN1Q8IZ57 195 aa18.93■□□□□ 0.62
PMS1-222ENST00000639501 NUS1Q96E22 293 aa18.93■□□□□ 0.62
PMS1-222ENST00000639501 ELP4Q96EB1 424 aa18.93■□□□□ 0.62
PMS1-222ENST00000639501 POT1Q9NUX5 634 aa18.93■□□□□ 0.62
PMS1-222ENST00000639501 WSB2Q9NYS7 404 aaPredicted RBP18.93■□□□□ 0.62
PMS1-222ENST00000639501 TAS2R5Q9NYW4 299 aa18.93■□□□□ 0.62
PMS1-222ENST00000639501 TP53BP1Q12888 1972 aaPredicted RBP18.92■□□□□ 0.62
PMS1-222ENST00000639501 FXYD6-FXYD2A0A087WZ82 144 aa18.92■□□□□ 0.62
PMS1-222ENST00000639501 GABARAPH6UMI1 98 aa18.92■□□□□ 0.62
PMS1-222ENST00000639501 EMC8O43402 210 aa18.92■□□□□ 0.62
PMS1-222ENST00000639501 ERI3O43414 337 aaKnown RBP18.92■□□□□ 0.62
PMS1-222ENST00000639501 KRT33AO76009 404 aa18.92■□□□□ 0.62
PMS1-222ENST00000639501 KDM4BO94953 1096 aa18.92■□□□□ 0.62
PMS1-222ENST00000639501 HIST1H2ABP04908 130 aa18.92■□□□□ 0.62
PMS1-222ENST00000639501 BMP7P18075 431 aa18.92■□□□□ 0.62
PMS1-222ENST00000639501 ERVFC1P60507 584 aa18.92■□□□□ 0.62
PMS1-222ENST00000639501 PRR5P85299 388 aa18.92■□□□□ 0.62
PMS1-222ENST00000639501 CDK5R1Q15078 307 aa18.92■□□□□ 0.62
PMS1-222ENST00000639501 RPE65Q16518 533 aa18.92■□□□□ 0.62
PMS1-222ENST00000639501 HIST3H2AQ7L7L0 130 aa18.92■□□□□ 0.62
PMS1-222ENST00000639501 TTLQ8NG68 377 aa18.92■□□□□ 0.62
PMS1-222ENST00000639501 CDS1Q92903 461 aa18.92■□□□□ 0.62
PMS1-222ENST00000639501 HIST1H2ACQ93077 130 aa18.92■□□□□ 0.62
PMS1-222ENST00000639501 SMIM19Q96E16 107 aa18.92■□□□□ 0.62
PMS1-222ENST00000639501 TOX2Q96NM4 488 aa18.92■□□□□ 0.62
PMS1-222ENST00000639501 SEMA4CQ9C0C4 833 aa18.92■□□□□ 0.62
PMS1-222ENST00000639501 FXYD6Q9H0Q3 95 aa18.92■□□□□ 0.62
PMS1-222ENST00000639501 EVA1AQ9H8M9 152 aa18.92■□□□□ 0.62
PMS1-222ENST00000639501 C17orf113A0A1B0GUU1 675 aa18.92■□□□□ 0.62
PMS1-222ENST00000639501 STX11O75558 287 aa18.92■□□□□ 0.62
PMS1-222ENST00000639501 CLTBP09497 229 aa18.92■□□□□ 0.62
PMS1-222ENST00000639501 VSIG10L2P0DP72 767 aa18.92■□□□□ 0.62
PMS1-222ENST00000639501 CALCRP30988 508 aa18.92■□□□□ 0.62
PMS1-222ENST00000639501 PTH2RP49190 550 aa18.92■□□□□ 0.62
PMS1-222ENST00000639501 TRA2BP62995 288 aaKnown RBP18.92■□□□□ 0.62
PMS1-222ENST00000639501 ZNF169Q14929 603 aaPredicted RBP18.92■□□□□ 0.62
PMS1-222ENST00000639501 SLC9A5Q14940 896 aa18.92■□□□□ 0.62
PMS1-222ENST00000639501 B3GNTL1Q67FW5 361 aaPredicted RBP18.92■□□□□ 0.62
PMS1-222ENST00000639501 OR7E24Q6IFN5 339 aa18.92■□□□□ 0.62
PMS1-222ENST00000639501 HSD17B13Q7Z5P4 300 aaPredicted RBP18.92■□□□□ 0.62
PMS1-222ENST00000639501 SYNPO2LQ9H987 977 aa18.92■□□□□ 0.62
PMS1-222ENST00000639501 KLHL9Q9P2J3 617 aa18.92■□□□□ 0.62
PMS1-222ENST00000639501 OPN4Q9UHM6 478 aa18.92■□□□□ 0.62
PMS1-222ENST00000639501 DNAH14Q0VDD8 3507 aa18.91■□□□□ 0.62
PMS1-222ENST00000639501 COL4A6Q14031 1691 aa18.91■□□□□ 0.62
PMS1-222ENST00000639501 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.91■□□□□ 0.62
PMS1-222ENST00000639501 PIN1P1O15428 100 aa18.91■□□□□ 0.62
PMS1-222ENST00000639501 CERS1P27544 350 aa18.91■□□□□ 0.62
PMS1-222ENST00000639501 ARHGDIBP52566 201 aa18.91■□□□□ 0.62
PMS1-222ENST00000639501 GK2Q14410 553 aaPredicted RBP18.91■□□□□ 0.62
PMS1-222ENST00000639501 ZNF660Q6AZW8 331 aaPredicted RBP18.91■□□□□ 0.62
PMS1-222ENST00000639501 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.91■□□□□ 0.62
PMS1-222ENST00000639501 FCRLAQ7L513 359 aa18.91■□□□□ 0.62
PMS1-222ENST00000639501 DEFB128Q7Z7B8 93 aa18.91■□□□□ 0.62
PMS1-222ENST00000639501 RELL2Q8NC24 303 aaPredicted RBP18.91■□□□□ 0.62
PMS1-222ENST00000639501 GINS4Q9BRT9 223 aa18.91■□□□□ 0.62
PMS1-222ENST00000639501 FKRPQ9H9S5 495 aa18.91■□□□□ 0.62
PMS1-222ENST00000639501 FBXL3Q9UKT7 428 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms