RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 EEF2KO00418 725 aaKnown RBP2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 CCSO14618 274 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 P2RX6O15547 441 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 KDELR3O43731 214 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 SMPD2O60906 423 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 NOL3O60936 208 aaKnown RBP2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 GMNNO75496 209 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 KHDRBS3O75525 346 aaKnown RBP2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 SORBS2O94875 1100 aaKnown RBP2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 AP2A2O94973 939 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 PTBP3O95758 552 aaKnown RBP2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 GNA14O95837 355 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 GUCA1CO95843 209 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 RPLP0P05388 317 aaKnown RBP2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 UGT2B4P06133 528 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 HEXBP07686 556 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 APRTP07741 180 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 ALPIP09923 528 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 ERVK-10P10266 1014 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 PRKAR1AP10644 381 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 CCL4P13236 92 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 CYP11B1P15538 503 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 RPL35AP18077 110 aaKnown RBP2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 AADACP22760 399 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 ACKR3P25106 362 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 CTNNA2P26232 953 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 CD1CP29017 333 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 UGT1A3P35503 534 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 CSNK1DP48730 415 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 PITPNBP48739 271 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 SULT1E1P49888 294 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 LIMK2P53671 638 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 AIF1P55008 147 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 KCNK10P57789 538 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 KCNJ10P78508 379 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 OGDHQ02218 1023 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 CDC20Q12834 499 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 NME3Q13232 169 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 C1orf61Q13536 156 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 MEF2DQ14814 521 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 KRT31Q15323 416 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 EXOC3L4Q17RC7 722 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 KLHL40Q2TBA0 621 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 PARP15Q460N3 678 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 CCDC14Q49A88 953 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 LRRC37A5PQ49AS3 106 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 FASTKD1Q53R41 847 aaKnown RBP2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 C2CD6Q53TS8 623 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 HSP90AA5PQ58FG0 334 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 LCE1CQ5T751 118 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 LCE1BQ5T7P3 118 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 NKAIN2Q5VXU1 208 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 SPECC1LQ69YQ0 1117 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 RAET1GQ6H3X3 334 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 ISLR2Q6UXK2 745 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 UNC5DQ6UXZ4 953 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 CEACAM20Q6UY09 585 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 C17orf107Q6ZR85 190 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 CDHR3Q6ZTQ4 885 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 RFPL4BQ6ZWI9 263 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 APTXQ7Z2E3 356 aaKnown RBP2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 VPS36Q86VN1 386 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 FAM131BQ86XD5 332 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 ZFAND4Q86XD8 727 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 LMNTD2Q8IXW0 634 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 SLC43A2Q8N370 569 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 NPWQ8N729 165 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 TCEANCQ8N8B7 351 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 FAM71CQ8NEG0 241 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 TRIM58Q8NG06 486 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 OR6C4Q8NGE1 309 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 OR4D9Q8NGE8 314 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 OR56A4Q8NGH8 313 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 OR10G8Q8NGN5 311 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 OR13C5Q8NGS8 318 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 OR2T11Q8NH01 316 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 CCL4L1Q8NHW4 92 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 JOSD2Q8TAC2 188 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 LMX1AQ8TE12 382 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 GATAD1Q8WUU5 269 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 ZNRF4Q8WWF5 429 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 NELFBQ8WX92 580 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 GLYATL1Q969I3 302 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 ANKRD9Q96BM1 317 aaPredicted RBP2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 COX14Q96I36 57 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 SLC45A3Q96JT2 553 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 ZNF641Q96N77 438 aaPredicted RBP2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 NEDD4LQ96PU5 975 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 TAAR6Q96RI8 345 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 PEBP4Q96S96 227 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 PCDHB18PQ96TA0 734 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 S1PR3Q99500 378 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 COQ7Q99807 217 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 TSG101Q99816 390 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 ASCL2Q99929 193 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 CRACR2AQ9BSW2 395 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 APOOQ9BUR5 198 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 RAB17Q9H0T7 212 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 MMP28Q9H239 520 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms