RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 FAM3CQ92520 227 aa4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 SLC45A3Q96JT2 553 aa4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 NAP1L5Q96NT1 182 aaPredicted RBP4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 OR4F4Q96R69 305 aa4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 OMDQ99983 421 aa4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 MCRIP2Q9BUT9 160 aaKnown RBP4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 ST6GALNAC5Q9BVH7 336 aa4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 OCR1Q9BZK8 76 aa4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 TRIM9Q9C026 710 aa4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 COMMD4Q9H0A8 199 aa4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 LIME1Q9H400 295 aa4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 HEBP1Q9NRV9 189 aa4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 ZNF346Q9UL40 294 aaKnown RBP4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 MRPS33Q9Y291 106 aaKnown RBP4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 EXOSC1Q9Y3B2 195 aaKnown RBP4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 FBXO7Q9Y3I1 522 aa4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 WDR45Q9Y484 360 aa4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 KLF2Q9Y5W3 355 aaPredicted RBP4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 UBIAD1Q9Y5Z9 338 aa4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 PDCD11Q14690 1871 aaKnown RBP4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 COL12A1Q99715 3063 aa4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 ATMQ13315 3056 aa4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 ZNF462Q96JM2 2506 aa4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 PCP4L1A6NKN8 68 aa4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 J3QKU1 62 aa4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 CDX4O14627 284 aaPredicted RBP4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 CASKO14936 926 aa4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 NUDT21O43809 227 aaKnown RBP4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 SNAP91O60641 907 aa4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 TPST2O60704 377 aa4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 ZNF821O75541 412 aaPredicted RBP4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 ANXA3P12429 323 aa4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 BCKDHAP12694 445 aa4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 SELEP16581 610 aa4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 RGS4P49798 205 aa4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 METAP1P53582 386 aa4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 NDUFV3P56181 108 aaKnown RBP4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 SP4Q02446 784 aa4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 IL24Q13007 206 aa4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 SRSF5Q13243 272 aaKnown RBP4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 SELPLGQ14242 412 aa4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 RAB35Q15286 201 aa4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 FILIP1LQ4L180 1135 aa4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 RABGAP1LQ5R372 815 aa4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 FAAP20Q6NZ36 180 aa4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 TMUB2Q71RG4 321 aa4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 ANKRD37Q7Z713 158 aa4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 ITPRIPQ8IWB1 547 aa4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 ZCCHC7Q8N3Z6 543 aaKnown RBP4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 AQP11Q8NBQ7 271 aa4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 OR2T3Q8NH03 318 aa4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 ESR2Q92731 530 aa4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 FRAT1Q92837 279 aaPredicted RBP4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 ADIPOR1Q96A54 375 aa4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 CALHM2Q9HA72 323 aa4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 IL1RL2Q9HB29 575 aa4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 ESM1Q9NQ30 184 aa4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 TMEM9BQ9NQ34 198 aa4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 TXLNGQ9NUQ3 528 aa4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 SMPD3Q9NY59 655 aaPredicted RBP4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 KLK13Q9UKR3 277 aa4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 SPATA2Q9UM82 520 aa4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 GINS2Q9Y248 185 aa4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 CNTNAP2Q9UHC6 1331 aa4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 CACNA1EQ15878 2313 aa4.12□□□□□ -1.75
TRAPPC9-216ENST00000634178 HECTD1Q9ULT8 2610 aa4.11□□□□□ -1.75
TRAPPC9-216ENST00000634178 PLXNB3Q9ULL4 1909 aa4.11□□□□□ -1.75
TRAPPC9-216ENST00000634178 PTPN13Q12923 2485 aa4.11□□□□□ -1.75
TRAPPC9-216ENST00000634178 K7EQG2 157 aa4.11□□□□□ -1.75
TRAPPC9-216ENST00000634178 DUX1O43812 170 aa4.11□□□□□ -1.75
TRAPPC9-216ENST00000634178 RAMP1O60894 148 aa4.11□□□□□ -1.75
TRAPPC9-216ENST00000634178 STX11O75558 287 aa4.11□□□□□ -1.75
TRAPPC9-216ENST00000634178 SNX4O95219 450 aa4.11□□□□□ -1.75
TRAPPC9-216ENST00000634178 DUS4LO95620 317 aaKnown RBP4.11□□□□□ -1.75
TRAPPC9-216ENST00000634178 POP4O95707 220 aaKnown RBP4.11□□□□□ -1.75
TRAPPC9-216ENST00000634178 MT-ND1P03886 318 aa4.11□□□□□ -1.75
TRAPPC9-216ENST00000634178 TPM2P07951 284 aa4.11□□□□□ -1.75
TRAPPC9-216ENST00000634178 CFC1BP0CG36 223 aa4.11□□□□□ -1.75
TRAPPC9-216ENST00000634178 CFC1P0CG37 223 aa4.11□□□□□ -1.75
TRAPPC9-216ENST00000634178 OXTRP30559 389 aa4.11□□□□□ -1.75
TRAPPC9-216ENST00000634178 PI4KAP42356 2102 aa4.11□□□□□ -1.75
TRAPPC9-216ENST00000634178 MFAP2P55001 183 aa4.11□□□□□ -1.75
TRAPPC9-216ENST00000634178 HAND2P61296 217 aa4.11□□□□□ -1.75
TRAPPC9-216ENST00000634178 NTHL1P78549 312 aa4.11□□□□□ -1.75
TRAPPC9-216ENST00000634178 UBE2V2Q15819 145 aa4.11□□□□□ -1.75
TRAPPC9-216ENST00000634178 CNPY1Q3B7I2 92 aa4.11□□□□□ -1.75
TRAPPC9-216ENST00000634178 TMEM225Q6GV28 225 aa4.11□□□□□ -1.75
TRAPPC9-216ENST00000634178 USP43Q70EL4 1123 aa4.11□□□□□ -1.75
TRAPPC9-216ENST00000634178 DPY19L4Q7Z388 723 aa4.11□□□□□ -1.75
TRAPPC9-216ENST00000634178 TMEM17Q86X19 198 aa4.11□□□□□ -1.75
TRAPPC9-216ENST00000634178 CCDC71Q8IV32 467 aaPredicted RBP4.11□□□□□ -1.75
TRAPPC9-216ENST00000634178 PHC2Q8IXK0 858 aa4.11□□□□□ -1.75
TRAPPC9-216ENST00000634178 SYT14Q8NB59 555 aa4.11□□□□□ -1.75
TRAPPC9-216ENST00000634178 ZNRF1Q8ND25 227 aa4.11□□□□□ -1.75
TRAPPC9-216ENST00000634178 CTNNBL1Q8WYA6 563 aaPredicted RBP4.11□□□□□ -1.75
TRAPPC9-216ENST00000634178 TAF15Q92804 592 aaKnown RBP eCLIP4.11□□□□□ -1.75
TRAPPC9-216ENST00000634178 WBP1Q96G27 269 aa4.11□□□□□ -1.75
TRAPPC9-216ENST00000634178 SDSLQ96GA7 329 aa4.11□□□□□ -1.75
TRAPPC9-216ENST00000634178 LINC00479Q96M42 142 aa4.11□□□□□ -1.75
TRAPPC9-216ENST00000634178 PRICKLE1Q96MT3 831 aaPredicted RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms