RNA–Protein interactions for RNA: ENST00000630482.2

SOX2-OT-256, SOX2 overlapping transcript, human

TSL 5

Gene SOX2-OT, Length 1,012 nt, Biotype sense overlapping.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX2-OT-256	ENST00000630482	HS6ST2	Q96MM7	605 aa		10.66	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	CCDC106	Q9BWC9	280 aa		10.66	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	REPIN1	Q9BWE0	567 aa	Known RBP	10.66	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	CACNG6	Q9BXT2	260 aa		10.66	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	C20orf27	Q9GZN8	174 aa		10.66	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	AKTIP	Q9H8T0	292 aa		10.66	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	YAE1D1	Q9NRH1	226 aa		10.66	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	ACER3	Q9NUN7	267 aa		10.66	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	NOP53	Q9NZM5	478 aa	Known RBP	10.66	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	WDR45	Q9Y484	360 aa		10.66	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	ATR	Q13535	2644 aa		10.66	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	IGKV3D-15	A0A087WSY6	115 aa		10.65	□□□□□ -0.7
SOX2-OT-256	ENST00000630482		A0A096LNT2	108 aa		10.65	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	RNASET2	O00584	256 aa	Known RBP	10.65	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	CD5L	O43866	347 aa		10.65	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	SCN2B	O60939	215 aa		10.65	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	AK1	P00568	194 aa		10.65	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	H2AFX	P16104	143 aa	Predicted RBP	10.65	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	SERPINB5	P36952	375 aa		10.65	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	CSNK2A1	P68400	391 aa	Predicted RBP	10.65	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	SLC25A3	Q00325	362 aa		10.65	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	CHRNE	Q04844	493 aa		10.65	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	C9orf135	Q5VTT2	229 aa		10.65	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	SAXO2	Q658L1	398 aa		10.65	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	C11orf71	Q6IPW1	123 aa		10.65	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	BHLHB9	Q6PI77	547 aa		10.65	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	10.65	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	CCDC103	Q8IW40	242 aa		10.65	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	OR52E4	Q8NGH9	312 aa		10.65	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	MIPOL1	Q8TD10	442 aa		10.65	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	XAGE5	Q8WWM1	108 aa		10.65	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	TMEM234	Q8WY98	164 aa		10.65	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	ROPN1L	Q96C74	230 aa		10.65	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	MUCL1	Q96DR8	90 aa		10.65	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	C1QTNF6	Q9BXI9	259 aa		10.65	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	DPY30	Q9C005	99 aa		10.65	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	KCNK9	Q9NPC2	374 aa		10.65	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	SERINC1	Q9NRX5	453 aa		10.65	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	ASIC5	Q9NY37	505 aa		10.65	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	CHRNA9	Q9UGM1	479 aa		10.65	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	NOSIP	Q9Y314	301 aa	Known RBP	10.65	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	SLC25A15	Q9Y619	301 aa		10.65	□□□□□ -0.7
SOX2-OT-256	ENST00000630482	FBN3	Q75N90	2809 aa		10.65	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	MXRA5	Q9NR99	2828 aa		10.65	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	GOLGA8Q	A0A0J9YX86	632 aa		10.64	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	CIB4	A0PJX0	185 aa		10.64	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	GOLGA8O	A6NCC3	632 aa		10.64	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	DUXA	A6NLW8	204 aa		10.64	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	GOLGA8N	F8WBI6	632 aa		10.64	□□□□□ -0.71
SOX2-OT-256	ENST00000630482		M0R1B8	84 aa		10.64	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	ANKRD28	O15084	1053 aa		10.64	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	TP53	P04637	393 aa	Predicted RBP	10.64	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	ITGA5	P08648	1049 aa		10.64	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	NUDT6	P53370	316 aa		10.64	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	MAD2L1	Q13257	205 aa	Predicted RBP	10.64	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	CHI3L2	Q15782	390 aa		10.64	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	GPAT3	Q53EU6	434 aa		10.64	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	SPANXN4	Q5MJ08	99 aa		10.64	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	FBXW9	Q5XUX1	488 aa		10.64	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	HMBOX1	Q6NT76	420 aa		10.64	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	SLC22A25	Q6T423	547 aa		10.64	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	EIF3M	Q7L2H7	374 aa	Known RBP	10.64	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	MTDH	Q86UE4	582 aa	Known RBP	10.64	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	ADGRG3	Q86Y34	549 aa		10.64	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	NUDCD3	Q8IVD9	361 aa		10.64	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	OR8J2	Q8NGG1	315 aa		10.64	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	SLC25A43	Q8WUT9	341 aa	Predicted RBP	10.64	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	CNOT9	Q92600	299 aa	Known RBP	10.64	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	APH1A	Q96BI3	265 aa		10.64	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	SORT1	Q99523	831 aa		10.64	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	VIPAS39	Q9H9C1	493 aa		10.64	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	EXD2	Q9NVH0	621 aa		10.64	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	EMC3	Q9P0I2	261 aa		10.64	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	POU2F3	Q9UKI9	436 aa		10.64	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	TMEM72	A0PK05	275 aa		10.63	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	ZC3H12D	A2A288	527 aa	Known RBP	10.63	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	CCT8L1P	A6NM43	557 aa		10.63	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	PMS2P2	O95744	297 aa		10.63	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	IMPDH2	P12268	514 aa		10.63	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	UQCRC2	P22695	453 aa		10.63	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	CD40	P25942	277 aa		10.63	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	TTK	P33981	857 aa		10.63	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	APOBEC1	P41238	236 aa	Known RBP	10.63	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	IDH2	P48735	452 aa	Known RBP	10.63	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	KHK	P50053	298 aa		10.63	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	NME5	P56597	212 aa		10.63	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	OR2B6	P58173	313 aa		10.63	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	GABRA6	Q16445	453 aa		10.63	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	SYPL1	Q16563	259 aa		10.63	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	ATAD3B	Q5T9A4	648 aa		10.63	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	AGAP6	Q5VW22	663 aa		10.63	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	CASP12	Q6UXS9	341 aa		10.63	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	GRINA	Q7Z429	371 aa		10.63	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	PHC2	Q8IXK0	858 aa		10.63	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	ZNF525	Q8N782	197 aa		10.63	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	ANKFN1	Q8N957	763 aa		10.63	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	SPATA3	Q8NHX4	192 aa		10.63	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	ARL8A	Q96BM9	186 aa		10.63	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	TEX37	Q96LM6	180 aa		10.63	□□□□□ -0.71
SOX2-OT-256	ENST00000630482	USB1	Q9BQ65	265 aa	Known RBP	10.63	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms