RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 GGNQ86UU5 652 aa5.73□□□□□ -1.49
TCF4-249ENST00000625716 STK32CQ86UX6 486 aa5.73□□□□□ -1.49
TCF4-249ENST00000625716 ZNF619Q8N2I2 560 aa5.73□□□□□ -1.49
TCF4-249ENST00000625716 ARFGAP2Q8N6H7 521 aa5.73□□□□□ -1.49
TCF4-249ENST00000625716 LINC01560Q8TB33 94 aa5.73□□□□□ -1.49
TCF4-249ENST00000625716 POC1BQ8TC44 478 aa5.73□□□□□ -1.49
TCF4-249ENST00000625716 PNPT1Q8TCS8 783 aaKnown RBP5.73□□□□□ -1.49
TCF4-249ENST00000625716 ST8SIA1Q92185 356 aa5.73□□□□□ -1.49
TCF4-249ENST00000625716 PMM1Q92871 262 aa5.73□□□□□ -1.49
TCF4-249ENST00000625716 CPNE4Q96A23 557 aaPredicted RBP5.73□□□□□ -1.49
TCF4-249ENST00000625716 STARD4Q96DR4 205 aa5.73□□□□□ -1.49
TCF4-249ENST00000625716 ARSGQ96EG1 525 aa5.73□□□□□ -1.49
TCF4-249ENST00000625716 GMPPAQ96IJ6 420 aaPredicted RBP5.73□□□□□ -1.49
TCF4-249ENST00000625716 TRNT1Q96Q11 434 aaKnown RBP5.73□□□□□ -1.49
TCF4-249ENST00000625716 OR52B2Q96RD2 323 aa5.73□□□□□ -1.49
TCF4-249ENST00000625716 INPP5KQ9BT40 448 aa5.73□□□□□ -1.49
TCF4-249ENST00000625716 CCDC28BQ9BUN5 200 aa5.73□□□□□ -1.49
TCF4-249ENST00000625716 KRTAP4-11Q9BYQ6 195 aa5.73□□□□□ -1.49
TCF4-249ENST00000625716 RAD21L1Q9H4I0 556 aa5.73□□□□□ -1.49
TCF4-249ENST00000625716 SERHL2Q9H4I8 314 aa5.73□□□□□ -1.49
TCF4-249ENST00000625716 ARMC7Q9H6L4 198 aa5.73□□□□□ -1.49
TCF4-249ENST00000625716 MTHFD2LQ9H903 347 aaPredicted RBP5.73□□□□□ -1.49
TCF4-249ENST00000625716 RNF122Q9H9V4 155 aa5.73□□□□□ -1.49
TCF4-249ENST00000625716 SDR39U1Q9NRG7 319 aaPredicted RBP5.73□□□□□ -1.49
TCF4-249ENST00000625716 THUMPD1Q9NXG2 353 aaKnown RBP5.73□□□□□ -1.49
TCF4-249ENST00000625716 GALNT8Q9NY28 637 aa5.73□□□□□ -1.49
TCF4-249ENST00000625716 ELOVL5Q9NYP7 299 aa5.73□□□□□ -1.49
TCF4-249ENST00000625716 CALML5Q9NZT1 146 aa5.73□□□□□ -1.49
TCF4-249ENST00000625716 SPIN1Q9Y657 262 aaPredicted RBP5.73□□□□□ -1.49
TCF4-249ENST00000625716 PHF3Q92576 2039 aaKnown RBP5.73□□□□□ -1.49
TCF4-249ENST00000625716 UTP20O75691 2785 aaKnown RBP5.73□□□□□ -1.49
TCF4-249ENST00000625716 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 A0A0J9YW62 118 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 SH3D21A4FU49 640 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 A6NNC1 897 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 C5orf58C9J3I9 102 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 CTAG2O75638 210 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 TNFSF13O75888 250 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 PRKD3O94806 890 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 GOSR1O95249 250 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 DBIP07108 87 aaKnown RBP5.72□□□□□ -1.49
TCF4-249ENST00000625716 ZCCHC18P0CG32 403 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 TFPIP10646 304 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 H2AFXP16104 143 aaPredicted RBP5.72□□□□□ -1.49
TCF4-249ENST00000625716 NCF2P19878 526 aaPredicted RBP5.72□□□□□ -1.49
TCF4-249ENST00000625716 PSMA4P25789 261 aaKnown RBP5.72□□□□□ -1.49
TCF4-249ENST00000625716 FKBP2P26885 142 aaKnown RBP5.72□□□□□ -1.49
TCF4-249ENST00000625716 RYKP34925 604 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 CD79BP40259 229 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 APOBEC1P41238 236 aaKnown RBP5.72□□□□□ -1.49
TCF4-249ENST00000625716 CDKN2CP42773 168 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 KIR2DL2P43627 348 aaPredicted RBP5.72□□□□□ -1.49
TCF4-249ENST00000625716 HTR3AP46098 478 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 SLC6A8P48029 635 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 SESN3P58005 492 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 KRTAP10-9P60411 292 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 CSNK2A1P68400 391 aaPredicted RBP5.72□□□□□ -1.49
TCF4-249ENST00000625716 IRX1P78414 480 aaPredicted RBP5.72□□□□□ -1.49
TCF4-249ENST00000625716 KCNJ10P78508 379 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 CHRNEQ04844 493 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 SKP2Q13309 424 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 DAZAP2Q15038 168 aaPredicted RBP5.72□□□□□ -1.49
TCF4-249ENST00000625716 RNPS1Q15287 305 aaKnown RBP5.72□□□□□ -1.49
TCF4-249ENST00000625716 TOMM34Q15785 309 aaPredicted RBP5.72□□□□□ -1.49
TCF4-249ENST00000625716 SYPL1Q16563 259 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 EXOC3L2Q2M3D2 409 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 NDUFAF6Q330K2 333 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 TIGD2Q4W5G0 525 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 TYW3Q6IPR3 259 aaKnown RBP5.72□□□□□ -1.49
TCF4-249ENST00000625716 C3orf33Q6P1S2 294 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 FRRS1Q6ZNA5 592 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 LRRC74BQ6ZQY2 392 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 FCRLAQ7L513 359 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 OLIG3Q7RTU3 272 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 MAVSQ7Z434 540 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 CMIPQ8IY22 773 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 PEX5LQ8IYB4 626 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 ANKFN1Q8N957 763 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 OR6K3Q8NGY3 331 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 ZFP90Q8TF47 636 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 WDR60Q8WVS4 1066 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 ROBO4Q8WZ75 1007 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 VPS33AQ96AX1 596 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 MAGEB18Q96M61 343 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 DACH2Q96NX9 599 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 GPATCH1Q9BRR8 931 aaKnown RBP5.72□□□□□ -1.49
TCF4-249ENST00000625716 TACO1Q9BSH4 297 aaKnown RBP5.72□□□□□ -1.49
TCF4-249ENST00000625716 MED18Q9BUE0 208 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 KLHL4Q9C0H6 718 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 OPN3Q9H1Y3 402 aaPredicted RBP5.72□□□□□ -1.49
TCF4-249ENST00000625716 RABEP2Q9H5N1 569 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 TPT1P8Q9HAU6 139 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 SLCO1B3Q9NPD5 702 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 RASSF1Q9NS23 344 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 ZNF226Q9NYT6 803 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 P2RX2Q9UBL9 471 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 CLEC4AQ9UMR7 237 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 DNAJC13O75165 2243 aa5.72□□□□□ -1.49
TCF4-249ENST00000625716 A0A0G2JPF8 293 aa5.71□□□□□ -1.5
TCF4-249ENST00000625716 AGAP5A6NIR3 686 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms