RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 SLC25A16P16260 332 aa9.67□□□□□ -0.86
DDX41-218ENST00000625286 MATN1P21941 496 aa9.67□□□□□ -0.86
DDX41-218ENST00000625286 EFNA4P52798 201 aa9.67□□□□□ -0.86
DDX41-218ENST00000625286 SLC16A1P53985 500 aa9.67□□□□□ -0.86
DDX41-218ENST00000625286 PHC1P78364 1004 aa9.67□□□□□ -0.86
DDX41-218ENST00000625286 H3F3AP84243 136 aa9.67□□□□□ -0.86
DDX41-218ENST00000625286 SWI5Q1ZZU3 235 aa9.67□□□□□ -0.86
DDX41-218ENST00000625286 ARHGAP11BQ3KRB8 267 aa9.67□□□□□ -0.86
DDX41-218ENST00000625286 SPDYE7PQ495Y7 208 aa9.67□□□□□ -0.86
DDX41-218ENST00000625286 ZCCHC23Q6ZST2 131 aa9.67□□□□□ -0.86
DDX41-218ENST00000625286 FBXL14Q8N1E6 418 aa9.67□□□□□ -0.86
DDX41-218ENST00000625286 MNS1Q8NEH6 495 aa9.67□□□□□ -0.86
DDX41-218ENST00000625286 ANP32BQ92688 251 aaKnown RBP9.67□□□□□ -0.86
DDX41-218ENST00000625286 APH1AQ96BI3 265 aa9.67□□□□□ -0.86
DDX41-218ENST00000625286 MSI2Q96DH6 328 aaKnown RBP9.67□□□□□ -0.86
DDX41-218ENST00000625286 RHOXF2Q9BQY4 288 aa9.67□□□□□ -0.86
DDX41-218ENST00000625286 INPP5KQ9BT40 448 aa9.67□□□□□ -0.86
DDX41-218ENST00000625286 TRMOQ9BU70 441 aa9.67□□□□□ -0.86
DDX41-218ENST00000625286 PRR14Q9BWN1 585 aa9.67□□□□□ -0.86
DDX41-218ENST00000625286 AMBRA1Q9C0C7 1298 aa9.67□□□□□ -0.86
DDX41-218ENST00000625286 BHLHE41Q9C0J9 482 aaPredicted RBP9.67□□□□□ -0.86
DDX41-218ENST00000625286 ZNF350Q9GZX5 532 aa9.67□□□□□ -0.86
DDX41-218ENST00000625286 SLC7A10Q9NS82 523 aa9.67□□□□□ -0.86
DDX41-218ENST00000625286 ASB6Q9NWX5 421 aa9.67□□□□□ -0.86
DDX41-218ENST00000625286 SLC17A7Q9P2U7 560 aa9.67□□□□□ -0.86
DDX41-218ENST00000625286 MALT1Q9UDY8 824 aa9.67□□□□□ -0.86
DDX41-218ENST00000625286 ZDHHC2Q9UIJ5 367 aa9.67□□□□□ -0.86
DDX41-218ENST00000625286 POU2F3Q9UKI9 436 aa9.67□□□□□ -0.86
DDX41-218ENST00000625286 MGAT4BQ9UQ53 548 aa9.67□□□□□ -0.86
DDX41-218ENST00000625286 TMEM114B3SHH9 223 aa9.66□□□□□ -0.86
DDX41-218ENST00000625286 ATP6V1G2-DDX39BF2Z307 99 aa9.66□□□□□ -0.86
DDX41-218ENST00000625286 NPHS1O60500 1241 aa9.66□□□□□ -0.86
DDX41-218ENST00000625286 LMX1BO60663 402 aa9.66□□□□□ -0.86
DDX41-218ENST00000625286 STX11O75558 287 aa9.66□□□□□ -0.86
DDX41-218ENST00000625286 PMS2P2O95744 297 aa9.66□□□□□ -0.86
DDX41-218ENST00000625286 TFPIP10646 304 aa9.66□□□□□ -0.86
DDX41-218ENST00000625286 IMPDH2P12268 514 aa9.66□□□□□ -0.86
DDX41-218ENST00000625286 DDX5P17844 614 aaKnown RBP9.66□□□□□ -0.86
DDX41-218ENST00000625286 USF1P22415 310 aaPredicted RBP9.66□□□□□ -0.86
DDX41-218ENST00000625286 RYKP34925 604 aa9.66□□□□□ -0.86
DDX41-218ENST00000625286 THBS2P35442 1172 aa9.66□□□□□ -0.86
DDX41-218ENST00000625286 CSNK2A1P68400 391 aaPredicted RBP9.66□□□□□ -0.86
DDX41-218ENST00000625286 LSM11P83369 360 aaKnown RBP eCLIP9.66□□□□□ -0.86
DDX41-218ENST00000625286 LSM12Q3MHD2 195 aaKnown RBP9.66□□□□□ -0.86
DDX41-218ENST00000625286 TYW3Q6IPR3 259 aaKnown RBP9.66□□□□□ -0.86
DDX41-218ENST00000625286 ZNF544Q6NX49 715 aa9.66□□□□□ -0.86
DDX41-218ENST00000625286 EMBQ6PCB8 327 aa9.66□□□□□ -0.86
DDX41-218ENST00000625286 ZIC4Q8N9L1 334 aa9.66□□□□□ -0.86
DDX41-218ENST00000625286 PROX1Q92786 737 aa9.66□□□□□ -0.86
DDX41-218ENST00000625286 RAB8BQ92930 207 aa9.66□□□□□ -0.86
DDX41-218ENST00000625286 PPP3R2Q96LZ3 170 aa9.66□□□□□ -0.86
DDX41-218ENST00000625286 DUSP26Q9BV47 211 aa9.66□□□□□ -0.86
DDX41-218ENST00000625286 SAP130Q9H0E3 1048 aa9.66□□□□□ -0.86
DDX41-218ENST00000625286 OR51I1Q9H343 314 aa9.66□□□□□ -0.86
DDX41-218ENST00000625286 SLC17A5Q9NRA2 495 aa9.66□□□□□ -0.86
DDX41-218ENST00000625286 TAS2R16Q9NYV7 291 aa9.66□□□□□ -0.86
DDX41-218ENST00000625286 CHRNA9Q9UGM1 479 aa9.66□□□□□ -0.86
DDX41-218ENST00000625286 ATP23Q9Y6H3 246 aa9.66□□□□□ -0.86
DDX41-218ENST00000625286 IGHV4-61A0A0C4DH41 118 aa9.65□□□□□ -0.86
DDX41-218ENST00000625286 ZC3H12DA2A288 527 aaKnown RBP9.65□□□□□ -0.86
DDX41-218ENST00000625286 AP3D1O14617 1153 aa9.65□□□□□ -0.86
DDX41-218ENST00000625286 CFLARO15519 480 aa9.65□□□□□ -0.86
DDX41-218ENST00000625286 MRPL33O75394 65 aaKnown RBP9.65□□□□□ -0.86
DDX41-218ENST00000625286 CHEK2O96017 543 aa9.65□□□□□ -0.86
DDX41-218ENST00000625286 C8BP07358 591 aa9.65□□□□□ -0.86
DDX41-218ENST00000625286 KRT16P08779 473 aa9.65□□□□□ -0.86
DDX41-218ENST00000625286 OR12D1P0DN82 309 aa9.65□□□□□ -0.86
DDX41-218ENST00000625286 PGCP20142 388 aa9.65□□□□□ -0.86
DDX41-218ENST00000625286 CCNA2P20248 432 aa9.65□□□□□ -0.86
DDX41-218ENST00000625286 PRPS1L1P21108 318 aa9.65□□□□□ -0.86
DDX41-218ENST00000625286 APOBEC3AP31941 199 aaPredicted RBP9.65□□□□□ -0.86
DDX41-218ENST00000625286 APOBEC1P41238 236 aaKnown RBP9.65□□□□□ -0.86
DDX41-218ENST00000625286 SLC17A1Q14916 467 aa9.65□□□□□ -0.86
DDX41-218ENST00000625286 PGS1Q32NB8 556 aa9.65□□□□□ -0.86
DDX41-218ENST00000625286 FAM120AOSQ5T036 256 aa9.65□□□□□ -0.86
DDX41-218ENST00000625286 TSPO2Q5TGU0 170 aa9.65□□□□□ -0.86
DDX41-218ENST00000625286 OR4F3Q6IEY1 312 aa9.65□□□□□ -0.86
DDX41-218ENST00000625286 KLHL17Q6TDP4 642 aa9.65□□□□□ -0.86
DDX41-218ENST00000625286 FRRS1Q6ZNA5 592 aa9.65□□□□□ -0.86
DDX41-218ENST00000625286 EIF3MQ7L2H7 374 aaKnown RBP9.65□□□□□ -0.86
DDX41-218ENST00000625286 SSX8Q7RTT4 187 aa9.65□□□□□ -0.86
DDX41-218ENST00000625286 FNDC5Q8NAU1 212 aa9.65□□□□□ -0.86
DDX41-218ENST00000625286 MIPOL1Q8TD10 442 aa9.65□□□□□ -0.86
DDX41-218ENST00000625286 CNOT9Q92600 299 aaKnown RBP9.65□□□□□ -0.86
DDX41-218ENST00000625286 MOAP1Q96BY2 351 aa9.65□□□□□ -0.86
DDX41-218ENST00000625286 FOXN4Q96NZ1 517 aa9.65□□□□□ -0.86
DDX41-218ENST00000625286 SORCS2Q96PQ0 1159 aa9.65□□□□□ -0.86
DDX41-218ENST00000625286 SHARPINQ9H0F6 387 aa9.65□□□□□ -0.86
DDX41-218ENST00000625286 SERINC1Q9NRX5 453 aa9.65□□□□□ -0.86
DDX41-218ENST00000625286 EMC3Q9P0I2 261 aa9.65□□□□□ -0.86
DDX41-218ENST00000625286 MOKQ9UQ07 419 aa9.65□□□□□ -0.86
DDX41-218ENST00000625286 FLVCR1Q9Y5Y0 555 aa9.65□□□□□ -0.86
DDX41-218ENST00000625286 TMEM72A0PK05 275 aa9.64□□□□□ -0.87
DDX41-218ENST00000625286 KLF11O14901 512 aa9.64□□□□□ -0.87
DDX41-218ENST00000625286 KIAA0513O60268 411 aa9.64□□□□□ -0.87
DDX41-218ENST00000625286 SKAP2O75563 359 aaPredicted RBP9.64□□□□□ -0.87
DDX41-218ENST00000625286 LYPLA1O75608 230 aaPredicted RBP9.64□□□□□ -0.87
DDX41-218ENST00000625286 CREB1P16220 341 aa9.64□□□□□ -0.87
DDX41-218ENST00000625286 MAPK1P28482 360 aa9.64□□□□□ -0.87
DDX41-218ENST00000625286 SOAT1P35610 550 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms