RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 GOLGA8OA6NCC3 632 aa16.69■□□□□ 0.26
SMN1-211ENST00000625245 ZNF716A6NP11 495 aa16.69■□□□□ 0.26
SMN1-211ENST00000625245 GOLGA8NF8WBI6 632 aa16.69■□□□□ 0.26
SMN1-211ENST00000625245 MRPL33O75394 65 aaKnown RBP16.69■□□□□ 0.26
SMN1-211ENST00000625245 OR12D1P0DN82 309 aa16.69■□□□□ 0.26
SMN1-211ENST00000625245 PTAFRP25105 342 aa16.69■□□□□ 0.26
SMN1-211ENST00000625245 APOBEC1P41238 236 aaKnown RBP16.69■□□□□ 0.26
SMN1-211ENST00000625245 CLDN8P56748 225 aa16.69■□□□□ 0.26
SMN1-211ENST00000625245 OR2B6P58173 313 aa16.69■□□□□ 0.26
SMN1-211ENST00000625245 DSCR9P59020 149 aa16.69■□□□□ 0.26
SMN1-211ENST00000625245 PDK3Q15120 406 aa16.69■□□□□ 0.26
SMN1-211ENST00000625245 TMEM249Q2WGJ8 235 aa16.69■□□□□ 0.26
SMN1-211ENST00000625245 ATAD3BQ5T9A4 648 aa16.69■□□□□ 0.26
SMN1-211ENST00000625245 C11orf71Q6IPW1 123 aa16.69■□□□□ 0.26
SMN1-211ENST00000625245 CCDC103Q8IW40 242 aa16.69■□□□□ 0.26
SMN1-211ENST00000625245 EIF1ADQ8N9N8 165 aaKnown RBP16.69■□□□□ 0.26
SMN1-211ENST00000625245 OR4A15Q8NGL6 344 aa16.69■□□□□ 0.26
SMN1-211ENST00000625245 PIGXQ8TBF5 258 aa16.69■□□□□ 0.26
SMN1-211ENST00000625245 TCP10LQ8TDR4 215 aa16.69■□□□□ 0.26
SMN1-211ENST00000625245 RAB8BQ92930 207 aa16.69■□□□□ 0.26
SMN1-211ENST00000625245 ARL5BQ96KC2 179 aa16.69■□□□□ 0.26
SMN1-211ENST00000625245 TNFRSF13CQ96RJ3 184 aa16.69■□□□□ 0.26
SMN1-211ENST00000625245 KCNK17Q96T54 332 aa16.69■□□□□ 0.26
SMN1-211ENST00000625245 ZNF350Q9GZX5 532 aa16.69■□□□□ 0.26
SMN1-211ENST00000625245 TAS2R16Q9NYV7 291 aa16.69■□□□□ 0.26
SMN1-211ENST00000625245 WDR45Q9Y484 360 aa16.69■□□□□ 0.26
SMN1-211ENST00000625245 CUBNO60494 3623 aa16.68■□□□□ 0.26
SMN1-211ENST00000625245 GPR171O14626 319 aa16.68■□□□□ 0.26
SMN1-211ENST00000625245 ANKRD28O15084 1053 aa16.68■□□□□ 0.26
SMN1-211ENST00000625245 BCAS1O75363 584 aaPredicted RBP16.68■□□□□ 0.26
SMN1-211ENST00000625245 CPSF4O95639 269 aaKnown RBP16.68■□□□□ 0.26
SMN1-211ENST00000625245 NTF4P34130 210 aa16.68■□□□□ 0.26
SMN1-211ENST00000625245 PGM1P36871 562 aa16.68■□□□□ 0.26
SMN1-211ENST00000625245 FOXG1P55316 489 aaPredicted RBP16.68■□□□□ 0.26
SMN1-211ENST00000625245 EMX2Q04743 252 aa16.68■□□□□ 0.26
SMN1-211ENST00000625245 MAD2L1Q13257 205 aaPredicted RBP16.68■□□□□ 0.26
SMN1-211ENST00000625245 C6orf52Q5T4I8 152 aa16.68■□□□□ 0.26
SMN1-211ENST00000625245 C9orf135Q5VTT2 229 aa16.68■□□□□ 0.26
SMN1-211ENST00000625245 TNFAIP8L2Q6P589 184 aaPredicted RBP16.68■□□□□ 0.26
SMN1-211ENST00000625245 B3GLCTQ6Y288 498 aa16.68■□□□□ 0.26
SMN1-211ENST00000625245 HMGN2P46Q86SG4 172 aa16.68■□□□□ 0.26
SMN1-211ENST00000625245 ZNF525Q8N782 197 aa16.68■□□□□ 0.26
SMN1-211ENST00000625245 PPP1R36Q96LQ0 422 aa16.68■□□□□ 0.26
SMN1-211ENST00000625245 CCDC106Q9BWC9 280 aa16.68■□□□□ 0.26
SMN1-211ENST00000625245 OR11A1Q9GZK7 315 aa16.68■□□□□ 0.26
SMN1-211ENST00000625245 MANSC1Q9H8J5 431 aa16.68■□□□□ 0.26
SMN1-211ENST00000625245 SLC35A3Q9Y2D2 325 aa16.68■□□□□ 0.26
SMN1-211ENST00000625245 ATP23Q9Y6H3 246 aa16.68■□□□□ 0.26
SMN1-211ENST00000625245 A0A096LNT2 108 aa16.67■□□□□ 0.26
SMN1-211ENST00000625245 PMS2P2O95744 297 aa16.67■□□□□ 0.26
SMN1-211ENST00000625245 FAM157CP0CG43 387 aa16.67■□□□□ 0.26
SMN1-211ENST00000625245 SERPINB5P36952 375 aa16.67■□□□□ 0.26
SMN1-211ENST00000625245 MAGEA8P43361 318 aa16.67■□□□□ 0.26
SMN1-211ENST00000625245 GABRA6Q16445 453 aa16.67■□□□□ 0.26
SMN1-211ENST00000625245 OR7E24Q6IFN5 339 aa16.67■□□□□ 0.26
SMN1-211ENST00000625245 TYW3Q6IPR3 259 aaKnown RBP16.67■□□□□ 0.26
SMN1-211ENST00000625245 GRINAQ7Z429 371 aa16.67■□□□□ 0.26
SMN1-211ENST00000625245 ANKRD46Q86W74 232 aa16.67■□□□□ 0.26
SMN1-211ENST00000625245 OR52E4Q8NGH9 312 aa16.67■□□□□ 0.26
SMN1-211ENST00000625245 FAM168AQ92567 244 aa16.67■□□□□ 0.26
SMN1-211ENST00000625245 NOP53Q9NZM5 478 aaKnown RBP16.67■□□□□ 0.26
SMN1-211ENST00000625245 UPB1Q9UBR1 384 aa16.67■□□□□ 0.26
SMN1-211ENST00000625245 CDC42EP3Q9UKI2 254 aa16.67■□□□□ 0.26
SMN1-211ENST00000625245 HDGFL3Q9Y3E1 203 aa16.67■□□□□ 0.26
SMN1-211ENST00000625245 RNASET2O00584 256 aaKnown RBP16.66■□□□□ 0.26
SMN1-211ENST00000625245 PHF1O43189 567 aaPredicted RBP16.66■□□□□ 0.26
SMN1-211ENST00000625245 KIAA0513O60268 411 aa16.66■□□□□ 0.26
SMN1-211ENST00000625245 AGR2O95994 175 aa16.66■□□□□ 0.26
SMN1-211ENST00000625245 LOXL1Q08397 574 aaPredicted RBP16.66■□□□□ 0.26
SMN1-211ENST00000625245 GPAT3Q53EU6 434 aa16.66■□□□□ 0.26
SMN1-211ENST00000625245 CASP12Q6UXS9 341 aa16.66■□□□□ 0.26
SMN1-211ENST00000625245 ADGRG3Q86Y34 549 aa16.66■□□□□ 0.26
SMN1-211ENST00000625245 RIBC1Q8N443 379 aaPredicted RBP16.66■□□□□ 0.26
SMN1-211ENST00000625245 ARFGAP2Q8N6H7 521 aa16.66■□□□□ 0.26
SMN1-211ENST00000625245 FAM71CQ8NEG0 241 aa16.66■□□□□ 0.26
SMN1-211ENST00000625245 NANOS1Q8WY41 292 aaKnown RBP16.66■□□□□ 0.26
SMN1-211ENST00000625245 ROPN1LQ96C74 230 aa16.66■□□□□ 0.26
SMN1-211ENST00000625245 ZG16BQ96DA0 208 aa16.66■□□□□ 0.26
SMN1-211ENST00000625245 MUS81Q96NY9 551 aa16.66■□□□□ 0.26
SMN1-211ENST00000625245 INPP5KQ9BT40 448 aa16.66■□□□□ 0.26
SMN1-211ENST00000625245 BEX2Q9BXY8 128 aa16.66■□□□□ 0.26
SMN1-211ENST00000625245 DPY30Q9C005 99 aa16.66■□□□□ 0.26
SMN1-211ENST00000625245 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.66■□□□□ 0.26
SMN1-211ENST00000625245 ELOA3DA6NLF2 546 aaPredicted RBP16.65■□□□□ 0.26
SMN1-211ENST00000625245 DNPH1O43598 174 aa16.65■□□□□ 0.26
SMN1-211ENST00000625245 ITGA5P08648 1049 aa16.65■□□□□ 0.26
SMN1-211ENST00000625245 SLC25A16P16260 332 aa16.65■□□□□ 0.26
SMN1-211ENST00000625245 UQCRC2P22695 453 aa16.65■□□□□ 0.26
SMN1-211ENST00000625245 IDH2P48735 452 aaKnown RBP16.65■□□□□ 0.26
SMN1-211ENST00000625245 CLK1P49759 484 aaKnown RBP16.65■□□□□ 0.26
SMN1-211ENST00000625245 SLC16A1P53985 500 aa16.65■□□□□ 0.26
SMN1-211ENST00000625245 PDCD2Q16342 344 aaPredicted RBP16.65■□□□□ 0.26
SMN1-211ENST00000625245 ELOA3BQ3SY89 546 aa16.65■□□□□ 0.26
SMN1-211ENST00000625245 CYB5R2Q6BCY4 276 aa16.65■□□□□ 0.26
SMN1-211ENST00000625245 EMBQ6PCB8 327 aa16.65■□□□□ 0.26
SMN1-211ENST00000625245 LSRQ86X29 649 aaPredicted RBP16.65■□□□□ 0.26
SMN1-211ENST00000625245 ELOA3Q8NG57 546 aa16.65■□□□□ 0.26
SMN1-211ENST00000625245 MIPOL1Q8TD10 442 aa16.65■□□□□ 0.26
SMN1-211ENST00000625245 FKRPQ9H9S5 495 aa16.65■□□□□ 0.26
SMN1-211ENST00000625245 POLE3Q9NRF9 147 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms