RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 TBL1XO60907 577 aa3.62□□□□□ -1.83
CPNE3-213ENST00000622183 SRSF10O75494 262 aaKnown RBP3.62□□□□□ -1.83
CPNE3-213ENST00000622183 CLDN9O95484 217 aa3.62□□□□□ -1.83
CPNE3-213ENST00000622183 TSPAN12O95859 305 aa3.62□□□□□ -1.83
CPNE3-213ENST00000622183 IGHV3-23P01764 117 aa3.62□□□□□ -1.83
CPNE3-213ENST00000622183 CCDC166P0CW27 439 aa3.62□□□□□ -1.83
CPNE3-213ENST00000622183 HMGB2P26583 209 aaKnown RBP3.62□□□□□ -1.83
CPNE3-213ENST00000622183 GNA11P29992 359 aa3.62□□□□□ -1.83
CPNE3-213ENST00000622183 QARSP47897 775 aaKnown RBP3.62□□□□□ -1.83
CPNE3-213ENST00000622183 P2RY4P51582 365 aa3.62□□□□□ -1.83
CPNE3-213ENST00000622183 ATP1B3P54709 279 aa3.62□□□□□ -1.83
CPNE3-213ENST00000622183 CDH4P55283 916 aa3.62□□□□□ -1.83
CPNE3-213ENST00000622183 ACTR3P61158 418 aa3.62□□□□□ -1.83
CPNE3-213ENST00000622183 KIAA0040Q15053 153 aa3.62□□□□□ -1.83
CPNE3-213ENST00000622183 KLHL38Q2WGJ6 581 aa3.62□□□□□ -1.83
CPNE3-213ENST00000622183 CFAP221Q4G0U5 840 aa3.62□□□□□ -1.83
CPNE3-213ENST00000622183 TFAP2EQ6VUC0 442 aa3.62□□□□□ -1.83
CPNE3-213ENST00000622183 DHDDSQ86SQ9 333 aa3.62□□□□□ -1.83
CPNE3-213ENST00000622183 PPP1R27Q86WC6 154 aa3.62□□□□□ -1.83
CPNE3-213ENST00000622183 NBPF5PQ86XG9 351 aaPredicted RBP3.62□□□□□ -1.83
CPNE3-213ENST00000622183 NRMQ8IXM6 262 aa3.62□□□□□ -1.83
CPNE3-213ENST00000622183 OR56B4Q8NH76 319 aa3.62□□□□□ -1.83
CPNE3-213ENST00000622183 UBE2E3Q969T4 207 aa3.62□□□□□ -1.83
CPNE3-213ENST00000622183 C10orf35Q96D05 121 aa3.62□□□□□ -1.83
CPNE3-213ENST00000622183 TBX15Q96SF7 602 aa3.62□□□□□ -1.83
CPNE3-213ENST00000622183 POLE4Q9NR33 117 aa3.62□□□□□ -1.83
CPNE3-213ENST00000622183 SLC7A10Q9NS82 523 aa3.62□□□□□ -1.83
CPNE3-213ENST00000622183 SEC14L3Q9UDX4 400 aa3.62□□□□□ -1.83
CPNE3-213ENST00000622183 CLSPNQ9HAW4 1339 aa3.62□□□□□ -1.83
CPNE3-213ENST00000622183 A0A1B0GVL5 298 aa3.61□□□□□ -1.83
CPNE3-213ENST00000622183 XKRY2A2RUG3 117 aa3.61□□□□□ -1.83
CPNE3-213ENST00000622183 HELTA6NFD8 242 aa3.61□□□□□ -1.83
CPNE3-213ENST00000622183 TUBAL3A6NHL2 446 aa3.61□□□□□ -1.83
CPNE3-213ENST00000622183 OR52A4PA6NMU1 304 aa3.61□□□□□ -1.83
CPNE3-213ENST00000622183 CCDC169A6NNP5 214 aa3.61□□□□□ -1.83
CPNE3-213ENST00000622183 RGS16O15492 202 aaPredicted RBP3.61□□□□□ -1.83
CPNE3-213ENST00000622183 ZNF264O43296 627 aa3.61□□□□□ -1.83
CPNE3-213ENST00000622183 MED7O43513 233 aa3.61□□□□□ -1.83
CPNE3-213ENST00000622183 HMMRO75330 724 aa3.61□□□□□ -1.83
CPNE3-213ENST00000622183 SERPINA3P01011 423 aa3.61□□□□□ -1.83
CPNE3-213ENST00000622183 OR8U8P0C7N1 319 aa3.61□□□□□ -1.83
CPNE3-213ENST00000622183 MX1P20591 662 aa3.61□□□□□ -1.83
CPNE3-213ENST00000622183 NTSP30990 170 aa3.61□□□□□ -1.83
CPNE3-213ENST00000622183 CCR1P32246 355 aa3.61□□□□□ -1.83
CPNE3-213ENST00000622183 SSR1P43307 286 aaKnown RBP3.61□□□□□ -1.83
CPNE3-213ENST00000622183 ATP5IP56385 69 aaPredicted RBP3.61□□□□□ -1.83
CPNE3-213ENST00000622183 CCDC173Q0VFZ6 552 aa3.61□□□□□ -1.83
CPNE3-213ENST00000622183 GRB7Q14451 532 aa3.61□□□□□ -1.83
CPNE3-213ENST00000622183 ARL6IP1Q15041 203 aa3.61□□□□□ -1.83
CPNE3-213ENST00000622183 PRR30Q53SZ7 412 aaPredicted RBP3.61□□□□□ -1.83
CPNE3-213ENST00000622183 WDR74Q6RFH5 385 aaPredicted RBP3.61□□□□□ -1.83
CPNE3-213ENST00000622183 RUFY3Q7L099 469 aa3.61□□□□□ -1.83
CPNE3-213ENST00000622183 ARCQ7LC44 396 aa3.61□□□□□ -1.83
CPNE3-213ENST00000622183 TRIM69Q86WT6 500 aa3.61□□□□□ -1.83
CPNE3-213ENST00000622183 RAPGEF5Q92565 580 aa3.61□□□□□ -1.83
CPNE3-213ENST00000622183 TUBGCP3Q96CW5 907 aa3.61□□□□□ -1.83
CPNE3-213ENST00000622183 TPD52L3Q96J77 140 aa3.61□□□□□ -1.83
CPNE3-213ENST00000622183 CNDP1Q96KN2 507 aa3.61□□□□□ -1.83
CPNE3-213ENST00000622183 ZNF184Q99676 751 aaPredicted RBP3.61□□□□□ -1.83
CPNE3-213ENST00000622183 KLHDC3Q9BQ90 382 aa3.61□□□□□ -1.83
CPNE3-213ENST00000622183 ROPN1BQ9BZX4 212 aaPredicted RBP3.61□□□□□ -1.83
CPNE3-213ENST00000622183 NHEJ1Q9H9Q4 299 aaPredicted RBP3.61□□□□□ -1.83
CPNE3-213ENST00000622183 DCAF16Q9NXF7 216 aa3.61□□□□□ -1.83
CPNE3-213ENST00000622183 DCDC2Q9UHG0 476 aa3.61□□□□□ -1.83
CPNE3-213ENST00000622183 UBQLN1Q9UMX0 589 aaKnown RBP3.61□□□□□ -1.83
CPNE3-213ENST00000622183 COPS3Q9UNS2 423 aa3.61□□□□□ -1.83
CPNE3-213ENST00000622183 KLF18A0A0U1RQI7 1052 aa3.6□□□□□ -1.83
CPNE3-213ENST00000622183 TMEM110-MUSTN1A8MSY1 372 aa3.6□□□□□ -1.83
CPNE3-213ENST00000622183 AP3B1O00203 1094 aa3.6□□□□□ -1.83
CPNE3-213ENST00000622183 FOXE1O00358 373 aaPredicted RBP3.6□□□□□ -1.83
CPNE3-213ENST00000622183 ATP5LO75964 103 aa3.6□□□□□ -1.83
CPNE3-213ENST00000622183 P0C879 139 aa3.6□□□□□ -1.83
CPNE3-213ENST00000622183 NCF2P19878 526 aaPredicted RBP3.6□□□□□ -1.83
CPNE3-213ENST00000622183 ANXA13P27216 316 aa3.6□□□□□ -1.83
CPNE3-213ENST00000622183 EPS15P42566 896 aa3.6□□□□□ -1.83
CPNE3-213ENST00000622183 SLC26A2P50443 739 aa3.6□□□□□ -1.83
CPNE3-213ENST00000622183 HLCSP50747 726 aa3.6□□□□□ -1.83
CPNE3-213ENST00000622183 RIPPLY3P57055 190 aa3.6□□□□□ -1.83
CPNE3-213ENST00000622183 OGDHQ02218 1023 aa3.6□□□□□ -1.83
CPNE3-213ENST00000622183 EGFEM1PQ0D2K5 195 aa3.6□□□□□ -1.83
CPNE3-213ENST00000622183 KCTD21Q4G0X4 260 aa3.6□□□□□ -1.83
CPNE3-213ENST00000622183 DMRTC1Q5HYR2 192 aa3.6□□□□□ -1.83
CPNE3-213ENST00000622183 CTSL3PQ5NE16 218 aa3.6□□□□□ -1.83
CPNE3-213ENST00000622183 CCDC183Q5T5S1 534 aa3.6□□□□□ -1.83
CPNE3-213ENST00000622183 SPINK14Q6IE38 97 aa3.6□□□□□ -1.83
CPNE3-213ENST00000622183 OR2A2Q6IF42 318 aa3.6□□□□□ -1.83
CPNE3-213ENST00000622183 FBXL22Q6P050 247 aa3.6□□□□□ -1.83
CPNE3-213ENST00000622183 ZYG11AQ6WRX3 759 aa3.6□□□□□ -1.83
CPNE3-213ENST00000622183 ACOT7LQ6ZUV0 252 aa3.6□□□□□ -1.83
CPNE3-213ENST00000622183 TAS2R42Q7RTR8 314 aa3.6□□□□□ -1.83
CPNE3-213ENST00000622183 TGIF2LXQ8IUE1 241 aa3.6□□□□□ -1.83
CPNE3-213ENST00000622183 FBXO16Q8IX29 292 aaPredicted RBP3.6□□□□□ -1.83
CPNE3-213ENST00000622183 CDH26Q8IXH8 852 aa3.6□□□□□ -1.83
CPNE3-213ENST00000622183 LINC00612Q8N6U2 182 aa3.6□□□□□ -1.83
CPNE3-213ENST00000622183 OR1L4Q8NGR5 311 aa3.6□□□□□ -1.83
CPNE3-213ENST00000622183 MAGEE2Q8TD90 523 aaPredicted RBP3.6□□□□□ -1.83
CPNE3-213ENST00000622183 RNF139Q8WU17 664 aa3.6□□□□□ -1.83
CPNE3-213ENST00000622183 FAM122AQ96E09 287 aa3.6□□□□□ -1.83
CPNE3-213ENST00000622183 TIMD4Q96H15 378 aa3.6□□□□□ -1.83
CPNE3-213ENST00000622183 SEC22AQ96IW7 307 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms