RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 FBXO9Q9UK97 447 aaPredicted RBP8.57□□□□□ -1.04
GGA3-223ENST00000621870 WASF3Q9UPY6 502 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 TMED7Q9Y3B3 224 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 NOP16Q9Y3C1 178 aaKnown RBP8.57□□□□□ -1.04
GGA3-223ENST00000621870 PCDHGB6Q9Y5F9 930 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 SLC22A7Q9Y694 548 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 KIAA1217Q5T5P2 1943 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 CACNA1AO00555 2505 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 CLCA1A8K7I4 914 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 KCNK5O95279 499 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 HLCSP50747 726 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 FAM199XQ6PEV8 388 aaPredicted RBP8.57□□□□□ -1.04
GGA3-223ENST00000621870 ZNF613Q6PF04 617 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 TBPL2Q6SJ96 375 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 SLC16A14Q7RTX9 510 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 MAVSQ7Z434 540 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 ZNF554Q86TJ5 538 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 LAS2Q8IYD9 372 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 LRRC18Q8N456 261 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 CPT1CQ8TCG5 803 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 SP7Q8TDD2 431 aaPredicted RBP8.57□□□□□ -1.04
GGA3-223ENST00000621870 TRUB1Q8WWH5 349 aaKnown RBP8.57□□□□□ -1.04
GGA3-223ENST00000621870 TRIM63Q969Q1 353 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 SLC25A44Q96H78 314 aaPredicted RBP8.57□□□□□ -1.04
GGA3-223ENST00000621870 SLC30A2Q9BRI3 323 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 TRPV4Q9HBA0 871 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 DLGAP1O14490 977 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 RBBP9O75884 186 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 CARD18P57730 90 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 TMEM69Q5SWH9 247 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 OGFRL1Q5TC84 451 aaPredicted RBP8.57□□□□□ -1.04
GGA3-223ENST00000621870 GPR139Q6DWJ6 353 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 ZNF585AQ6P3V2 769 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 PGBD2Q6P3X8 592 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 BEND4Q6ZU67 534 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 SLC35D2Q76EJ3 337 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 OR5AK2Q8NH90 309 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 CCDC107Q8WV48 283 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 GATA6Q92908 595 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 ZNF578Q96N58 590 aaPredicted RBP8.57□□□□□ -1.04
GGA3-223ENST00000621870 PCED1AQ9H1Q7 454 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 EGLN3Q9H6Z9 239 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 SCP2D1Q9UJQ7 156 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 POMT2Q9UKY4 750 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 KCNS2Q9ULS6 477 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 EMC9Q9Y3B6 208 aa8.57□□□□□ -1.04
GGA3-223ENST00000621870 TRBV4-1A0A0J9YWV2 114 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 C13orf42A0A1B0GVH6 325 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 PHYHO14832 338 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 NUDT21O43809 227 aaKnown RBP8.56□□□□□ -1.04
GGA3-223ENST00000621870 KIAA0513O60268 411 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 SCGB1D2O95969 90 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 HRGP04196 525 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 CD22P20273 847 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 TPTEP56180 551 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 GAB1Q13480 694 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 TUBA3CQ13748 450 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 MLC1Q15049 377 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 RSU1Q15404 277 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 PROX2Q3B8N5 592 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 ZNF322Q6U7Q0 402 aaPredicted RBP8.56□□□□□ -1.04
GGA3-223ENST00000621870 ANKRD31Q8N7Z5 1873 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 DTWD2Q8NBA8 298 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 OR1N1Q8NGS0 311 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 RREB1Q92766 1687 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 GDF15Q99988 308 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 NT5DC2Q9H857 520 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 UCKL1Q9NWZ5 548 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 TUBA8Q9NY65 449 aaPredicted RBP8.56□□□□□ -1.04
GGA3-223ENST00000621870 TMEM9Q9P0T7 183 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 POLHQ9Y253 713 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 NOSIPQ9Y314 301 aaKnown RBP8.56□□□□□ -1.04
GGA3-223ENST00000621870 ZFHX2Q9C0A1 2572 aaPredicted RBP8.56□□□□□ -1.04
GGA3-223ENST00000621870 LOXHD1Q8IVV2 1947 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 COL11A2P13942 1736 aaPredicted RBP8.56□□□□□ -1.04
GGA3-223ENST00000621870 CCDC187A0A096LP49 1063 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 ISPDA4D126 451 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 LILRA5A6NI73 299 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 K7EQS6 105 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 L7N2F9 121 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 B4GAT1O43505 415 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 SCGNO76038 276 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 HTR3BO95264 441 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 ZGLP1P0C6A0 271 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 MAGEA2P43356 314 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 PITPNBP48739 271 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 CD97P48960 835 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 VAMP2P63027 116 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 PGGHGQ32M88 737 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 TP53I13Q8NBR0 393 aaPredicted RBP8.56□□□□□ -1.04
GGA3-223ENST00000621870 OR5M1Q8NGP8 315 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 MVB12AQ96EY5 273 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 LINC00615Q96LM1 132 aaPredicted RBP8.56□□□□□ -1.04
GGA3-223ENST00000621870 DMRTB1Q96MA1 342 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 DEFB127Q9H1M4 99 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 SIDT1Q9NXL6 827 aaKnown RBP8.56□□□□□ -1.04
GGA3-223ENST00000621870 COQ3Q9NZJ6 369 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 GSKIPQ9P0R6 139 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 PMF1-BGLAPU3KQ54 211 aa8.56□□□□□ -1.04
GGA3-223ENST00000621870 MUC6Q6W4X9 2439 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms