RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 OR12D1P0DN82 309 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 ACPPP15309 386 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 CLDN6P56747 220 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 ZNF776Q68DI1 518 aaPredicted RBP6.74□□□□□ -1.33
COLCA1-205ENST00000620864 H3F3CQ6NXT2 135 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 ZNF100Q8IYN0 542 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 ZNF610Q8N9Z0 462 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 OR9I1Q8NGQ6 314 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 OR14L1PQ8NHC6 308 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 CYB5D2Q8WUJ1 264 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 GAB3Q8WWW8 586 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 GNPNAT1Q96EK6 184 aaPredicted RBP6.74□□□□□ -1.33
COLCA1-205ENST00000620864 ZIC5Q96T25 663 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 ZDHHC11Q9H8X9 412 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 HHLA2Q9UM44 414 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 NFS1Q9Y697 457 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 MRC1P22897 1456 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 NID2Q14112 1375 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 TMEM72A0PK05 275 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 BMP4P12644 408 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 POU3F4P49335 361 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 PCBD1P61457 104 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 SLC7A9P82251 487 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 SPEM2Q0P670 501 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 PDZK1IP1Q13113 114 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 TECRLQ5HYJ1 363 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 SPATC1Q76KD6 591 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 OR52E2Q8NGJ4 325 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 APH1BQ8WW43 257 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 TFGQ92734 400 aaPredicted RBP6.74□□□□□ -1.33
COLCA1-205ENST00000620864 DHRS9Q9BPW9 319 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 METTL17Q9H7H0 456 aaPredicted RBP6.74□□□□□ -1.33
COLCA1-205ENST00000620864 ADAM29Q9UKF5 820 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 FCF1Q9Y324 198 aaKnown RBP6.74□□□□□ -1.33
COLCA1-205ENST00000620864 RNF11Q9Y3C5 154 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 GIPP09681 153 aaPredicted RBP6.74□□□□□ -1.33
COLCA1-205ENST00000620864 FOLR1P15328 257 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 FGF7P21781 194 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 KCNQ1P51787 676 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 LRIT3Q3SXY7 679 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 TCTE1Q5JU00 501 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 ABHD15Q6UXT9 468 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 COMMD1Q8N668 190 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 LMF2Q9BU23 707 aaKnown RBP6.74□□□□□ -1.33
COLCA1-205ENST00000620864 ZDHHC5Q9C0B5 715 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 BTNL2Q9UIR0 455 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 GPR160Q9UJ42 338 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 ATXN7L1Q9ULK2 861 aaPredicted RBP6.74□□□□□ -1.33
COLCA1-205ENST00000620864 ANKRD12Q6UB98 2062 aa6.74□□□□□ -1.33
COLCA1-205ENST00000620864 NUMA1Q14980 2115 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 HIDE1A8MVS5 230 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 B4GALT2O60909 372 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 GLSO94925 669 aaPredicted RBP6.73□□□□□ -1.33
COLCA1-205ENST00000620864 ADH1BP00325 375 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 C1QBP02746 253 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 HOXD11P31277 338 aaPredicted RBP6.73□□□□□ -1.33
COLCA1-205ENST00000620864 MRPS34P82930 218 aaKnown RBP6.73□□□□□ -1.33
COLCA1-205ENST00000620864 PKDCCQ504Y2 493 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 ZNF691Q5VV52 312 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 PDZD3Q86UT5 571 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 SLC24A4Q8NFF2 622 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 FAM213BQ8TBF2 198 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 CPNE4Q96A23 557 aaPredicted RBP6.73□□□□□ -1.33
COLCA1-205ENST00000620864 C12orf57Q99622 126 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 PBX4Q9BYU1 374 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 SMOC2Q9H3U7 446 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 LMAN1LQ9HAT1 526 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 RANGRFQ9HD47 186 aaPredicted RBP6.73□□□□□ -1.33
COLCA1-205ENST00000620864 HS3ST3A1Q9Y663 406 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 CCDC88AQ3V6T2 1871 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 GJB5O95377 273 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 PTHP01270 115 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 TBPP20226 339 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 CNR2P34972 360 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 BMPR1AP36894 532 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 ZNF239Q16600 458 aaKnown RBP6.73□□□□□ -1.33
COLCA1-205ENST00000620864 APOOLQ6UXV4 268 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 GLIS3Q8NEA6 775 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 WDR20Q8TBZ3 569 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 FAM3CQ92520 227 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 RAB7BQ96AH8 199 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 TPSD1Q9BZJ3 242 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 PDE7BQ9NP56 450 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 PRTFDC1Q9NRG1 225 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 WNT6Q9Y6F9 365 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 OR2T1O43869 369 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 GCSHP23434 173 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 GABRB3P28472 473 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 OR1E2P47887 323 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 TPPP2P59282 170 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 GRB2P62993 217 aaKnown RBP6.73□□□□□ -1.33
COLCA1-205ENST00000620864 ACY1Q03154 408 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 LTB4RQ15722 352 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 IL17AQ16552 155 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 ARSIQ5FYB1 569 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 C3orf38Q5JPI3 329 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 LEG1Q6P5S2 330 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 TOMM40LQ969M1 308 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 ARV1Q9H2C2 271 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 POLHQ9Y253 713 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms