RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 TAS2R16Q9NYV7 291 aa18.86■□□□□ 0.61
CNTNAP3B-212ENST00000617422 MRTO4Q9UKD2 239 aaKnown RBP18.86■□□□□ 0.61
CNTNAP3B-212ENST00000617422 MED31Q9Y3C7 131 aa18.86■□□□□ 0.61
CNTNAP3B-212ENST00000617422 CDH10Q9Y6N8 788 aa18.86■□□□□ 0.61
CNTNAP3B-212ENST00000617422 MPDZO75970 2070 aa18.86■□□□□ 0.61
CNTNAP3B-212ENST00000617422 A0A1W2PNU3 283 aaPredicted RBP18.85■□□□□ 0.61
CNTNAP3B-212ENST00000617422 SYNDIG1LA6NDD5 238 aa18.85■□□□□ 0.61
CNTNAP3B-212ENST00000617422 UNC119BA6NIH7 251 aa18.85■□□□□ 0.61
CNTNAP3B-212ENST00000617422 B4E171 279 aa18.85■□□□□ 0.61
CNTNAP3B-212ENST00000617422 ZNF264O43296 627 aa18.85■□□□□ 0.61
CNTNAP3B-212ENST00000617422 WISP1O95388 367 aa18.85■□□□□ 0.61
CNTNAP3B-212ENST00000617422 S100A5P33763 92 aa18.85■□□□□ 0.61
CNTNAP3B-212ENST00000617422 TGFBR1P36897 503 aa18.85■□□□□ 0.61
CNTNAP3B-212ENST00000617422 TSPAN7P41732 249 aa18.85■□□□□ 0.61
CNTNAP3B-212ENST00000617422 ZNF117Q03924 483 aa18.85■□□□□ 0.61
CNTNAP3B-212ENST00000617422 ST3GAL4Q11206 333 aa18.85■□□□□ 0.61
CNTNAP3B-212ENST00000617422 FHL1Q13642 323 aa18.85■□□□□ 0.61
CNTNAP3B-212ENST00000617422 TMPRSS11FQ6ZWK6 438 aa18.85■□□□□ 0.61
CNTNAP3B-212ENST00000617422 LPAR4Q99677 370 aa18.85■□□□□ 0.61
CNTNAP3B-212ENST00000617422 LOXL2Q9Y4K0 774 aa18.85■□□□□ 0.61
CNTNAP3B-212ENST00000617422 TRBV11-1A0A0K0K1C0 115 aa18.85■□□□□ 0.61
CNTNAP3B-212ENST00000617422 SH3D21A4FU49 640 aa18.85■□□□□ 0.61
CNTNAP3B-212ENST00000617422 GMFGO60234 142 aa18.85■□□□□ 0.61
CNTNAP3B-212ENST00000617422 PTTG1O95997 202 aa18.85■□□□□ 0.61
CNTNAP3B-212ENST00000617422 KLK3P07288 261 aaPredicted RBP18.85■□□□□ 0.61
CNTNAP3B-212ENST00000617422 CCR4P51679 360 aa18.85■□□□□ 0.61
CNTNAP3B-212ENST00000617422 PNLIPRP2P54317 469 aa18.85■□□□□ 0.61
CNTNAP3B-212ENST00000617422 SLC26A5P58743 744 aa18.85■□□□□ 0.61
CNTNAP3B-212ENST00000617422 SYT14P1Q58G82 188 aa18.85■□□□□ 0.61
CNTNAP3B-212ENST00000617422 THSD4Q6ZMP0 1018 aa18.85■□□□□ 0.61
CNTNAP3B-212ENST00000617422 FAM26EQ8N5C1 309 aa18.85■□□□□ 0.61
CNTNAP3B-212ENST00000617422 WDR36Q8NI36 951 aaKnown RBP18.85■□□□□ 0.61
CNTNAP3B-212ENST00000617422 TXNDC15Q96J42 360 aa18.85■□□□□ 0.61
CNTNAP3B-212ENST00000617422 POLE4Q9NR33 117 aa18.85■□□□□ 0.61
CNTNAP3B-212ENST00000617422 WWP2O00308 870 aa18.84■□□□□ 0.61
CNTNAP3B-212ENST00000617422 DOC2BQ14184 412 aa18.84■□□□□ 0.61
CNTNAP3B-212ENST00000617422 SNAPC1Q16533 368 aa18.84■□□□□ 0.61
CNTNAP3B-212ENST00000617422 STX19Q8N4C7 294 aa18.84■□□□□ 0.61
CNTNAP3B-212ENST00000617422 C9orf43Q8TAL5 461 aaPredicted RBP18.84■□□□□ 0.61
CNTNAP3B-212ENST00000617422 C6orf62Q9GZU0 229 aaPredicted RBP18.84■□□□□ 0.61
CNTNAP3B-212ENST00000617422 OR52D1Q9H346 318 aa18.84■□□□□ 0.61
CNTNAP3B-212ENST00000617422 HHATLQ9HCP6 504 aa18.84■□□□□ 0.61
CNTNAP3B-212ENST00000617422 TOR4AQ9NXH8 423 aa18.84■□□□□ 0.61
CNTNAP3B-212ENST00000617422 TRAV27A0A087WT01 109 aa18.83■□□□□ 0.61
CNTNAP3B-212ENST00000617422 ALG1L2C9J202 215 aa18.83■□□□□ 0.61
CNTNAP3B-212ENST00000617422 FADS1O60427 444 aa18.83■□□□□ 0.61
CNTNAP3B-212ENST00000617422 SLC2A10O95528 541 aa18.83■□□□□ 0.61
CNTNAP3B-212ENST00000617422 BCL2A1Q16548 175 aa18.83■□□□□ 0.61
CNTNAP3B-212ENST00000617422 OIT3Q8WWZ8 545 aa18.83■□□□□ 0.61
CNTNAP3B-212ENST00000617422 OSTF1Q92882 214 aa18.83■□□□□ 0.61
CNTNAP3B-212ENST00000617422 TP53INP1Q96A56 240 aa18.83■□□□□ 0.61
CNTNAP3B-212ENST00000617422 LRR1Q96L50 414 aa18.83■□□□□ 0.61
CNTNAP3B-212ENST00000617422 HS6ST2Q96MM7 605 aa18.83■□□□□ 0.61
CNTNAP3B-212ENST00000617422 UBQLN3Q9H347 655 aa18.83■□□□□ 0.61
CNTNAP3B-212ENST00000617422 EXOSC3Q9NQT5 275 aaKnown RBP18.83■□□□□ 0.61
CNTNAP3B-212ENST00000617422 SACM1LQ9NTJ5 587 aa18.83■□□□□ 0.61
CNTNAP3B-212ENST00000617422 RPS6KB2Q9UBS0 482 aa18.83■□□□□ 0.61
CNTNAP3B-212ENST00000617422 SIGLEC7Q9Y286 467 aa18.83■□□□□ 0.61
CNTNAP3B-212ENST00000617422 PCDHGA3Q9Y5H0 932 aa18.83■□□□□ 0.61
CNTNAP3B-212ENST00000617422 NPFFR2Q9Y5X5 522 aa18.83■□□□□ 0.61
CNTNAP3B-212ENST00000617422 IGKV1D-42A0A075B6H8 117 aa18.83■□□□□ 0.6
CNTNAP3B-212ENST00000617422 A0A087WUJ7 227 aa18.83■□□□□ 0.6
CNTNAP3B-212ENST00000617422 LRRN3E7EW58 273 aa18.83■□□□□ 0.6
CNTNAP3B-212ENST00000617422 GTPBP1O00178 669 aaKnown RBP18.83■□□□□ 0.6
CNTNAP3B-212ENST00000617422 RBM34P42696 430 aaKnown RBP18.83■□□□□ 0.6
CNTNAP3B-212ENST00000617422 DBPQ10586 325 aaPredicted RBP18.83■□□□□ 0.6
CNTNAP3B-212ENST00000617422 NCF4Q15080 339 aa18.83■□□□□ 0.6
CNTNAP3B-212ENST00000617422 TOMM34Q15785 309 aaPredicted RBP18.83■□□□□ 0.6
CNTNAP3B-212ENST00000617422 OCLNQ16625 522 aa18.83■□□□□ 0.6
CNTNAP3B-212ENST00000617422 CLDN22Q8N7P3 220 aa18.83■□□□□ 0.6
CNTNAP3B-212ENST00000617422 POC5Q8NA72 575 aa18.83■□□□□ 0.6
CNTNAP3B-212ENST00000617422 OR5M3Q8NGP4 307 aa18.83■□□□□ 0.6
CNTNAP3B-212ENST00000617422 FANK1Q8TC84 345 aa18.83■□□□□ 0.6
CNTNAP3B-212ENST00000617422 BRIX1Q8TDN6 353 aaKnown RBP18.83■□□□□ 0.6
CNTNAP3B-212ENST00000617422 TMEM9BQ9NQ34 198 aa18.83■□□□□ 0.6
CNTNAP3B-212ENST00000617422 PTRH2Q9Y3E5 179 aaKnown RBP18.83■□□□□ 0.6
CNTNAP3B-212ENST00000617422 PEX16Q9Y5Y5 336 aa18.83■□□□□ 0.6
CNTNAP3B-212ENST00000617422 C4orf47A7E2U8 309 aa18.82■□□□□ 0.6
CNTNAP3B-212ENST00000617422 TBX1O43435 398 aa18.82■□□□□ 0.6
CNTNAP3B-212ENST00000617422 CELA2AP08217 269 aa18.82■□□□□ 0.6
CNTNAP3B-212ENST00000617422 DBTP11182 482 aaKnown RBP18.82■□□□□ 0.6
CNTNAP3B-212ENST00000617422 LCN1P31025 176 aa18.82■□□□□ 0.6
CNTNAP3B-212ENST00000617422 FBXW4P57775 412 aa18.82■□□□□ 0.6
CNTNAP3B-212ENST00000617422 CRYZQ08257 329 aaKnown RBP18.82■□□□□ 0.6
CNTNAP3B-212ENST00000617422 SELENBP1Q13228 472 aa18.82■□□□□ 0.6
CNTNAP3B-212ENST00000617422 PCOLCEQ15113 449 aa18.82■□□□□ 0.6
CNTNAP3B-212ENST00000617422 ISXQ2M1V0 245 aa18.82■□□□□ 0.6
CNTNAP3B-212ENST00000617422 PGGHGQ32M88 737 aa18.82■□□□□ 0.6
CNTNAP3B-212ENST00000617422 CCDC92Q53HC0 331 aaPredicted RBP18.82■□□□□ 0.6
CNTNAP3B-212ENST00000617422 SLC25A30Q5SVS4 291 aa18.82■□□□□ 0.6
CNTNAP3B-212ENST00000617422 STEAP3Q658P3 488 aa18.82■□□□□ 0.6
CNTNAP3B-212ENST00000617422 ZNF367Q7RTV3 350 aa18.82■□□□□ 0.6
CNTNAP3B-212ENST00000617422 ZNF440Q8IYI8 595 aa18.82■□□□□ 0.6
CNTNAP3B-212ENST00000617422 NUBPLQ8TB37 319 aa18.82■□□□□ 0.6
CNTNAP3B-212ENST00000617422 ZNF582Q96NG8 517 aaPredicted RBP18.82■□□□□ 0.6
CNTNAP3B-212ENST00000617422 PARD6AQ9NPB6 346 aa18.82■□□□□ 0.6
CNTNAP3B-212ENST00000617422 KRCC1Q9NPI7 259 aaPredicted RBP18.82■□□□□ 0.6
CNTNAP3B-212ENST00000617422 GPN3Q9UHW5 284 aaPredicted RBP18.82■□□□□ 0.6
CNTNAP3B-212ENST00000617422 EP300Q09472 2414 aaPredicted RBP18.82■□□□□ 0.6
CNTNAP3B-212ENST00000617422 DMXL1Q9Y485 3027 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms