RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 BHLHA15Q7RTS1 189 aaPredicted RBP8.58□□□□□ -1.04
TARDBP-218ENST00000617172 YTHDF3Q7Z739 585 aaKnown RBP8.58□□□□□ -1.04
TARDBP-218ENST00000617172 ADGRG3Q86Y34 549 aa8.58□□□□□ -1.04
TARDBP-218ENST00000617172 PEX5LQ8IYB4 626 aa8.58□□□□□ -1.04
TARDBP-218ENST00000617172 ZNF440Q8IYI8 595 aa8.58□□□□□ -1.04
TARDBP-218ENST00000617172 PIGXQ8TBF5 258 aa8.58□□□□□ -1.04
TARDBP-218ENST00000617172 PIWIL2Q8TC59 973 aaKnown RBP8.58□□□□□ -1.04
TARDBP-218ENST00000617172 ZNF75CPQ92670 426 aaPredicted RBP8.58□□□□□ -1.04
TARDBP-218ENST00000617172 DDIT4LQ96D03 193 aa8.58□□□□□ -1.04
TARDBP-218ENST00000617172 PERPQ96FX8 193 aa8.58□□□□□ -1.04
TARDBP-218ENST00000617172 MAELQ96JY0 434 aaKnown RBP8.58□□□□□ -1.04
TARDBP-218ENST00000617172 POTEKPQ9BYX7 375 aa8.58□□□□□ -1.04
TARDBP-218ENST00000617172 SLC38A1Q9H2H9 487 aa8.58□□□□□ -1.04
TARDBP-218ENST00000617172 ARMC7Q9H6L4 198 aa8.58□□□□□ -1.04
TARDBP-218ENST00000617172 CTPS2Q9NRF8 586 aa8.58□□□□□ -1.04
TARDBP-218ENST00000617172 ZNF701Q9NV72 531 aaPredicted RBP8.58□□□□□ -1.04
TARDBP-218ENST00000617172 PARPBPQ9NWS1 579 aa8.58□□□□□ -1.04
TARDBP-218ENST00000617172 ZIM2Q9NZV7 527 aa8.58□□□□□ -1.04
TARDBP-218ENST00000617172 TMEM181Q9P2C4 612 aa8.58□□□□□ -1.04
TARDBP-218ENST00000617172 ING1Q9UK53 422 aaPredicted RBP8.58□□□□□ -1.04
TARDBP-218ENST00000617172 RNF115Q9Y4L5 304 aa8.58□□□□□ -1.04
TARDBP-218ENST00000617172 NIPBLQ6KC79 2804 aaeCLIP8.58□□□□□ -1.04
TARDBP-218ENST00000617172 NUP214P35658 2090 aaPredicted RBP8.57□□□□□ -1.04
TARDBP-218ENST00000617172 ACANP16112 2415 aa8.57□□□□□ -1.04
TARDBP-218ENST00000617172 GOLGA8QA0A0J9YX86 632 aa8.57□□□□□ -1.04
TARDBP-218ENST00000617172 PRAMEF27A3QJZ7 478 aa8.57□□□□□ -1.04
TARDBP-218ENST00000617172 GOLGA8OA6NCC3 632 aa8.57□□□□□ -1.04
TARDBP-218ENST00000617172 TMEM247A6NEH6 219 aa8.57□□□□□ -1.04
TARDBP-218ENST00000617172 CFAP73A6NFT4 308 aa8.57□□□□□ -1.04
TARDBP-218ENST00000617172 C9JVG2 144 aa8.57□□□□□ -1.04
TARDBP-218ENST00000617172 GOLGA8NF8WBI6 632 aa8.57□□□□□ -1.04
TARDBP-218ENST00000617172 UBDO15205 165 aa8.57□□□□□ -1.04
TARDBP-218ENST00000617172 PGM3O95394 542 aa8.57□□□□□ -1.04
TARDBP-218ENST00000617172 ANP32DO95626 131 aa8.57□□□□□ -1.04
TARDBP-218ENST00000617172 GGT1P19440 569 aa8.57□□□□□ -1.04
TARDBP-218ENST00000617172 IL12AP29459 219 aa8.57□□□□□ -1.04
TARDBP-218ENST00000617172 PTH2RP49190 550 aa8.57□□□□□ -1.04
TARDBP-218ENST00000617172 POLR2HP52434 150 aaKnown RBP8.57□□□□□ -1.04
TARDBP-218ENST00000617172 SLC16A1P53985 500 aa8.57□□□□□ -1.04
TARDBP-218ENST00000617172 H3F3AP84243 136 aa8.57□□□□□ -1.04
TARDBP-218ENST00000617172 PPA1Q15181 289 aa8.57□□□□□ -1.04
TARDBP-218ENST00000617172 SYPL1Q16563 259 aa8.57□□□□□ -1.04
TARDBP-218ENST00000617172 C1QTNF12Q5T7M4 302 aa8.57□□□□□ -1.04
TARDBP-218ENST00000617172 FBXW9Q5XUX1 488 aa8.57□□□□□ -1.04
TARDBP-218ENST00000617172 ALKBH2Q6NS38 261 aa8.57□□□□□ -1.04
TARDBP-218ENST00000617172 CLEC9AQ6UXN8 241 aa8.57□□□□□ -1.04
TARDBP-218ENST00000617172 OLIG3Q7RTU3 272 aa8.57□□□□□ -1.04
TARDBP-218ENST00000617172 ANKFN1Q8N957 763 aa8.57□□□□□ -1.04
TARDBP-218ENST00000617172 MGARPQ8TDB4 240 aa8.57□□□□□ -1.04
TARDBP-218ENST00000617172 WDR60Q8WVS4 1066 aa8.57□□□□□ -1.04
TARDBP-218ENST00000617172 IGFBPL1Q8WX77 278 aa8.57□□□□□ -1.04
TARDBP-218ENST00000617172 CNOT9Q92600 299 aaKnown RBP8.57□□□□□ -1.04
TARDBP-218ENST00000617172 AKAP1Q92667 903 aaKnown RBP eCLIP8.57□□□□□ -1.04
TARDBP-218ENST00000617172 FBXW5Q969U6 566 aa8.57□□□□□ -1.04
TARDBP-218ENST00000617172 APH1AQ96BI3 265 aa8.57□□□□□ -1.04
TARDBP-218ENST00000617172 ZNF775Q96BV0 537 aaPredicted RBP8.57□□□□□ -1.04
TARDBP-218ENST00000617172 TRMT61AQ96FX7 289 aaKnown RBP8.57□□□□□ -1.04
TARDBP-218ENST00000617172 ITCHQ96J02 903 aa8.57□□□□□ -1.04
TARDBP-218ENST00000617172 RADILQ96JH8 1075 aa8.57□□□□□ -1.04
TARDBP-218ENST00000617172 ARL5BQ96KC2 179 aa8.57□□□□□ -1.04
TARDBP-218ENST00000617172 Q96MF0 132 aa8.57□□□□□ -1.04
TARDBP-218ENST00000617172 NAA11Q9BSU3 229 aaPredicted RBP8.57□□□□□ -1.04
TARDBP-218ENST00000617172 INPP5KQ9BT40 448 aa8.57□□□□□ -1.04
TARDBP-218ENST00000617172 CACYBPQ9HB71 228 aaKnown RBP8.57□□□□□ -1.04
TARDBP-218ENST00000617172 TMBIM4Q9HC24 238 aa8.57□□□□□ -1.04
TARDBP-218ENST00000617172 SDR39U1Q9NRG7 319 aaPredicted RBP8.57□□□□□ -1.04
TARDBP-218ENST00000617172 P2RX2Q9UBL9 471 aa8.57□□□□□ -1.04
TARDBP-218ENST00000617172 ZNF232Q9UNY5 417 aa8.57□□□□□ -1.04
TARDBP-218ENST00000617172 NOSIPQ9Y314 301 aaKnown RBP8.57□□□□□ -1.04
TARDBP-218ENST00000617172 TMED7-TICAM2A0A0A6YYA0 188 aa8.56□□□□□ -1.04
TARDBP-218ENST00000617172 CLDN24A6NM45 220 aa8.56□□□□□ -1.04
TARDBP-218ENST00000617172 MRPL33O75394 65 aaKnown RBP8.56□□□□□ -1.04
TARDBP-218ENST00000617172 TGDSO95455 350 aa8.56□□□□□ -1.04
TARDBP-218ENST00000617172 PLAUP00749 431 aa8.56□□□□□ -1.04
TARDBP-218ENST00000617172 GSNP06396 782 aa8.56□□□□□ -1.04
TARDBP-218ENST00000617172 CHRM4P08173 479 aa8.56□□□□□ -1.04
TARDBP-218ENST00000617172 HOXB4P17483 251 aaPredicted RBP8.56□□□□□ -1.04
TARDBP-218ENST00000617172 COX5AP20674 150 aa8.56□□□□□ -1.04
TARDBP-218ENST00000617172 RPS4Y1P22090 263 aaKnown RBP8.56□□□□□ -1.04
TARDBP-218ENST00000617172 CDKN2CP42773 168 aa8.56□□□□□ -1.04
TARDBP-218ENST00000617172 CRATP43155 626 aa8.56□□□□□ -1.04
TARDBP-218ENST00000617172 CRISP3P54108 245 aa8.56□□□□□ -1.04
TARDBP-218ENST00000617172 OR2B6P58173 313 aa8.56□□□□□ -1.04
TARDBP-218ENST00000617172 COPZ1P61923 177 aa8.56□□□□□ -1.04
TARDBP-218ENST00000617172 SLC35A1P78382 337 aa8.56□□□□□ -1.04
TARDBP-218ENST00000617172 LTBQ06643 244 aa8.56□□□□□ -1.04
TARDBP-218ENST00000617172 LARS2Q15031 903 aaKnown RBP8.56□□□□□ -1.04
TARDBP-218ENST00000617172 TSC22D1Q15714 1073 aa8.56□□□□□ -1.04
TARDBP-218ENST00000617172 ETFDHQ16134 617 aa8.56□□□□□ -1.04
TARDBP-218ENST00000617172 MRPL2Q5T653 305 aaKnown RBP8.56□□□□□ -1.04
TARDBP-218ENST00000617172 ABLIM2Q6H8Q1 611 aa8.56□□□□□ -1.04
TARDBP-218ENST00000617172 OR7E24Q6IFN5 339 aa8.56□□□□□ -1.04
TARDBP-218ENST00000617172 UBE2J2Q8N2K1 259 aa8.56□□□□□ -1.04
TARDBP-218ENST00000617172 ZBTB9Q96C00 473 aa8.56□□□□□ -1.04
TARDBP-218ENST00000617172 TLCD1Q96CP7 247 aa8.56□□□□□ -1.04
TARDBP-218ENST00000617172 COX4I2Q96KJ9 171 aa8.56□□□□□ -1.04
TARDBP-218ENST00000617172 ZNF300Q96RE9 604 aaPredicted RBP8.56□□□□□ -1.04
TARDBP-218ENST00000617172 RAD21L1Q9H4I0 556 aa8.56□□□□□ -1.04
TARDBP-218ENST00000617172 TPT1P8Q9HAU6 139 aa8.56□□□□□ -1.04
TARDBP-218ENST00000617172 FAIMQ9NVQ4 179 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms