RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 GADD45GO95257 159 aa8.04□□□□□ -1.12
SMAD4-217ENST00000611848 MST1P26927 711 aa8.04□□□□□ -1.12
SMAD4-217ENST00000611848 LCN1P31025 176 aa8.04□□□□□ -1.12
SMAD4-217ENST00000611848 MAN2A2P49641 1150 aa8.04□□□□□ -1.12
SMAD4-217ENST00000611848 KHKP50053 298 aa8.04□□□□□ -1.12
SMAD4-217ENST00000611848 ANXA11P50995 505 aaKnown RBP8.04□□□□□ -1.12
SMAD4-217ENST00000611848 POU6F2P78424 691 aaPredicted RBP8.04□□□□□ -1.12
SMAD4-217ENST00000611848 MVKQ03426 396 aa8.04□□□□□ -1.12
SMAD4-217ENST00000611848 SMN1Q16637 294 aaKnown RBP8.04□□□□□ -1.12
SMAD4-217ENST00000611848 DUSP5Q16690 384 aa8.04□□□□□ -1.12
SMAD4-217ENST00000611848 RNFT1Q5M7Z0 435 aa8.04□□□□□ -1.12
SMAD4-217ENST00000611848 SYT6Q5T7P8 510 aaPredicted RBP8.04□□□□□ -1.12
SMAD4-217ENST00000611848 SLC16A12Q6ZSM3 486 aa8.04□□□□□ -1.12
SMAD4-217ENST00000611848 PRSS48Q7RTY5 328 aa8.04□□□□□ -1.12
SMAD4-217ENST00000611848 ANKRD13BQ86YJ7 626 aa8.04□□□□□ -1.12
SMAD4-217ENST00000611848 SIAH3Q8IW03 269 aa8.04□□□□□ -1.12
SMAD4-217ENST00000611848 SVOPQ8N4V2 548 aa8.04□□□□□ -1.12
SMAD4-217ENST00000611848 COX18Q8N8Q8 333 aa8.04□□□□□ -1.12
SMAD4-217ENST00000611848 BBS10Q8TAM1 723 aa8.04□□□□□ -1.12
SMAD4-217ENST00000611848 PROX1Q92786 737 aa8.04□□□□□ -1.12
SMAD4-217ENST00000611848 UBE2FQ969M7 185 aa8.04□□□□□ -1.12
SMAD4-217ENST00000611848 NTNG2Q96CW9 530 aa8.04□□□□□ -1.12
SMAD4-217ENST00000611848 DTNBP1Q96EV8 351 aa8.04□□□□□ -1.12
SMAD4-217ENST00000611848 TMEM41AQ96HV5 264 aa8.04□□□□□ -1.12
SMAD4-217ENST00000611848 SLC35G5Q96KT7 338 aa8.04□□□□□ -1.12
SMAD4-217ENST00000611848 GPR137Q96N19 417 aa8.04□□□□□ -1.12
SMAD4-217ENST00000611848 OR7D2Q96RA2 312 aa8.04□□□□□ -1.12
SMAD4-217ENST00000611848 ZNF607Q96SK3 696 aa8.04□□□□□ -1.12
SMAD4-217ENST00000611848 NIPSNAP1Q9BPW8 284 aa8.04□□□□□ -1.12
SMAD4-217ENST00000611848 TREX2Q9BQ50 279 aaPredicted RBP8.04□□□□□ -1.12
SMAD4-217ENST00000611848 BCL7BQ9BQE9 202 aa8.04□□□□□ -1.12
SMAD4-217ENST00000611848 YIPF4Q9BSR8 244 aa8.04□□□□□ -1.12
SMAD4-217ENST00000611848 G6PC3Q9BUM1 346 aa8.04□□□□□ -1.12
SMAD4-217ENST00000611848 OR51I1Q9H343 314 aa8.04□□□□□ -1.12
SMAD4-217ENST00000611848 FKBP14Q9NWM8 211 aa8.04□□□□□ -1.12
SMAD4-217ENST00000611848 QPCTLQ9NXS2 382 aa8.04□□□□□ -1.12
SMAD4-217ENST00000611848 KLRF1Q9NZS2 232 aa8.04□□□□□ -1.12
SMAD4-217ENST00000611848 B4GALT7Q9UBV7 327 aa8.04□□□□□ -1.12
SMAD4-217ENST00000611848 AASSQ9UDR5 926 aa8.04□□□□□ -1.12
SMAD4-217ENST00000611848 ENOPH1Q9UHY7 261 aa8.04□□□□□ -1.12
SMAD4-217ENST00000611848 ENPP5Q9UJA9 477 aa8.04□□□□□ -1.12
SMAD4-217ENST00000611848 ACAD8Q9UKU7 415 aa8.04□□□□□ -1.12
SMAD4-217ENST00000611848 PCNX3Q9H6A9 2034 aa8.04□□□□□ -1.12
SMAD4-217ENST00000611848 PCNX1Q96RV3 2341 aa8.04□□□□□ -1.12
SMAD4-217ENST00000611848 TMEM247A6NEH6 219 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 NPIPA5E9PKD4 350 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 RGS10O43665 173 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 ASNA1O43681 348 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 FAM20BO75063 409 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 ICOSLGO75144 302 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 WISP1O95388 367 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 OXSR1O95747 527 aaPredicted RBP8.03□□□□□ -1.12
SMAD4-217ENST00000611848 AGR2O95994 175 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 AK1P00568 194 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 MT-ND2P03891 347 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 OR12D1P0DN82 309 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 GABRB1P18505 474 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 FUT4P22083 530 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 ELAVL4P26378 380 aaKnown RBP8.03□□□□□ -1.12
SMAD4-217ENST00000611848 EVI2BP34910 448 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 RFC3P40938 356 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 PTGDSP41222 190 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 RFX3P48380 749 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 MASP1P48740 699 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 PPIAP62937 165 aaKnown RBP8.03□□□□□ -1.12
SMAD4-217ENST00000611848 RBPJQ06330 500 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 DCTN2Q13561 401 aaKnown RBP8.03□□□□□ -1.12
SMAD4-217ENST00000611848 SYPL1Q16563 259 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.03□□□□□ -1.12
SMAD4-217ENST00000611848 FGD3Q5JSP0 725 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 PRAMEF8Q5VWM4 474 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 PRAMEF7Q5VXH5 474 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 BICRALQ6AI39 1079 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 DESI1Q6ICB0 168 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 DEPDC4Q8N2C3 294 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 GHDCQ8N2G8 530 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 FAM109AQ8N4B1 249 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 ZNF540Q8NDQ6 660 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 OR9Q2Q8NGE9 314 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 PHF10Q8WUB8 498 aaKnown RBP8.03□□□□□ -1.12
SMAD4-217ENST00000611848 RNF138Q8WVD3 245 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 JSRP1Q96MG2 331 aaPredicted RBP8.03□□□□□ -1.12
SMAD4-217ENST00000611848 ALPK1Q96QP1 1244 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 FUZQ9BT04 418 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 DCUN1D5Q9BTE7 237 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 FUNDC2Q9BWH2 189 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 CCDC90BQ9GZT6 254 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 ZDHHC11Q9H8X9 412 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 ZNF556Q9HAH1 456 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 HHATLQ9HCP6 504 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 RASSF1Q9NS23 344 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 ZNF226Q9NYT6 803 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 SEC14L3Q9UDX4 400 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 PSORS1C1Q9UIG5 152 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 NPIPA1Q9UND3 350 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 NCKAP5O14513 1909 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 DSPPQ9NZW4 1301 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 TRBV4-1A0A0J9YWV2 114 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 LRRC3CA6NJW4 275 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 FADS1O60427 444 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms