RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 C20orf141Q9NUB4 165 aa20.67■□□□□ 0.9
SHANK2-220ENST00000608988 CLEC4AQ9UMR7 237 aa20.67■□□□□ 0.9
SHANK2-220ENST00000608988 CA5BQ9Y2D0 317 aa20.67■□□□□ 0.9
SHANK2-220ENST00000608988 A0A1W2PS29 197 aa20.66■□□□□ 0.9
SHANK2-220ENST00000608988 OR2M5A3KFT3 312 aa20.66■□□□□ 0.9
SHANK2-220ENST00000608988 RFXAPO00287 272 aa20.66■□□□□ 0.9
SHANK2-220ENST00000608988 RAB40ALP0C0E4 278 aa20.66■□□□□ 0.9
SHANK2-220ENST00000608988 LAMP2P13473 410 aa20.66■□□□□ 0.9
SHANK2-220ENST00000608988 VEGFCP49767 419 aa20.66■□□□□ 0.9
SHANK2-220ENST00000608988 CRMP1Q14194 572 aa20.66■□□□□ 0.9
SHANK2-220ENST00000608988 MLF2Q15773 248 aaPredicted RBP20.66■□□□□ 0.9
SHANK2-220ENST00000608988 RGS7BPQ6MZT1 257 aaPredicted RBP20.66■□□□□ 0.9
SHANK2-220ENST00000608988 FAM111BQ6SJ93 734 aa20.66■□□□□ 0.9
SHANK2-220ENST00000608988 MTSS1LQ765P7 747 aa20.66■□□□□ 0.9
SHANK2-220ENST00000608988 CHMP1BQ7LBR1 199 aa20.66■□□□□ 0.9
SHANK2-220ENST00000608988 NAXDQ8IW45 347 aa20.66■□□□□ 0.9
SHANK2-220ENST00000608988 OR13C2Q8NGS9 318 aa20.66■□□□□ 0.9
SHANK2-220ENST00000608988 RAB40AQ8WXH6 277 aa20.66■□□□□ 0.9
SHANK2-220ENST00000608988 SHARPINQ9H0F6 387 aa20.66■□□□□ 0.9
SHANK2-220ENST00000608988 TM7SF3Q9NS93 570 aa20.66■□□□□ 0.9
SHANK2-220ENST00000608988 SERTAD3Q9UJW9 196 aa20.66■□□□□ 0.9
SHANK2-220ENST00000608988 ABHD14A-ACY1A0A1B0GW23 586 aa20.65■□□□□ 0.9
SHANK2-220ENST00000608988 HMSDA8MTL9 139 aa20.65■□□□□ 0.9
SHANK2-220ENST00000608988 AIPO00170 330 aa20.65■□□□□ 0.9
SHANK2-220ENST00000608988 CREBL2O60519 120 aaPredicted RBP20.65■□□□□ 0.9
SHANK2-220ENST00000608988 CXCL14O95715 111 aa20.65■□□□□ 0.9
SHANK2-220ENST00000608988 LDOC1O95751 146 aaPredicted RBP20.65■□□□□ 0.9
SHANK2-220ENST00000608988 ALDOBP05062 364 aa20.65■□□□□ 0.9
SHANK2-220ENST00000608988 NFYAP23511 347 aaPredicted RBP20.65■□□□□ 0.9
SHANK2-220ENST00000608988 IL32P24001 234 aa20.65■□□□□ 0.9
SHANK2-220ENST00000608988 ZNF626Q68DY1 528 aa20.65■□□□□ 0.9
SHANK2-220ENST00000608988 TMEM81Q6P7N7 255 aa20.65■□□□□ 0.9
SHANK2-220ENST00000608988 PRSS45Q7RTY3 260 aa20.65■□□□□ 0.9
SHANK2-220ENST00000608988 OR13C5Q8NGS8 318 aa20.65■□□□□ 0.9
SHANK2-220ENST00000608988 MOSPD2Q8NHP6 518 aa20.65■□□□□ 0.9
SHANK2-220ENST00000608988 GAL3ST3Q96A11 431 aa20.65■□□□□ 0.9
SHANK2-220ENST00000608988 KLHL15Q96M94 604 aa20.65■□□□□ 0.9
SHANK2-220ENST00000608988 CNN2Q99439 309 aaKnown RBP20.65■□□□□ 0.9
SHANK2-220ENST00000608988 ZNF559Q9BR84 538 aa20.65■□□□□ 0.9
SHANK2-220ENST00000608988 TIMM29Q9BSF4 260 aa20.65■□□□□ 0.9
SHANK2-220ENST00000608988 NKIRAS2Q9NYR9 191 aa20.65■□□□□ 0.9
SHANK2-220ENST00000608988 APOBEC3BQ9UH17 382 aaKnown RBP20.65■□□□□ 0.9
SHANK2-220ENST00000608988 PFDN2Q9UHV9 154 aa20.65■□□□□ 0.9
SHANK2-220ENST00000608988 ICAM5Q9UMF0 924 aa20.65■□□□□ 0.9
SHANK2-220ENST00000608988 HEATR5BQ9P2D3 2071 aa20.65■□□□□ 0.9
SHANK2-220ENST00000608988 ANKRD20A5PA0PJZ0 165 aa20.64■□□□□ 0.9
SHANK2-220ENST00000608988 C1QTNF3-AMACRE9PGA6 284 aa20.64■□□□□ 0.9
SHANK2-220ENST00000608988 GMDSO60547 372 aa20.64■□□□□ 0.9
SHANK2-220ENST00000608988 FGF18O76093 207 aa20.64■□□□□ 0.9
SHANK2-220ENST00000608988 ADH1CP00326 375 aa20.64■□□□□ 0.9
SHANK2-220ENST00000608988 AK1P00568 194 aa20.64■□□□□ 0.9
SHANK2-220ENST00000608988 NOS3P29474 1203 aa20.64■□□□□ 0.9
SHANK2-220ENST00000608988 CMPK1P30085 196 aa20.64■□□□□ 0.9
SHANK2-220ENST00000608988 RPS11P62280 158 aaKnown RBP eCLIP20.64■□□□□ 0.9
SHANK2-220ENST00000608988 EXOSC6Q5RKV6 272 aaKnown RBP20.64■□□□□ 0.9
SHANK2-220ENST00000608988 SFRP4Q6FHJ7 346 aaPredicted RBP20.64■□□□□ 0.9
SHANK2-220ENST00000608988 FAM199XQ6PEV8 388 aaPredicted RBP20.64■□□□□ 0.9
SHANK2-220ENST00000608988 ARSKQ6UWY0 536 aa20.64■□□□□ 0.9
SHANK2-220ENST00000608988 MEIOBQ8N635 442 aa20.64■□□□□ 0.9
SHANK2-220ENST00000608988 OR2L3Q8NG85 312 aa20.64■□□□□ 0.9
SHANK2-220ENST00000608988 SCARB1Q8WTV0 552 aa20.64■□□□□ 0.9
SHANK2-220ENST00000608988 NSMAFQ92636 917 aa20.64■□□□□ 0.9
SHANK2-220ENST00000608988 PELI1Q96FA3 418 aa20.64■□□□□ 0.9
SHANK2-220ENST00000608988 ELMOD3Q96FG2 381 aa20.64■□□□□ 0.9
SHANK2-220ENST00000608988 OR10A4Q9H209 315 aa20.64■□□□□ 0.9
SHANK2-220ENST00000608988 A0A0B4J203 849 aa20.64■□□□□ 0.89
SHANK2-220ENST00000608988 A8MXK9 166 aa20.64■□□□□ 0.89
SHANK2-220ENST00000608988 MCRIP1C9JLW8 97 aa20.64■□□□□ 0.89
SHANK2-220ENST00000608988 GALR3O60755 368 aaPredicted RBP20.64■□□□□ 0.89
SHANK2-220ENST00000608988 KCNJ13O60928 360 aa20.64■□□□□ 0.89
SHANK2-220ENST00000608988 RGS11O94810 467 aa20.64■□□□□ 0.89
SHANK2-220ENST00000608988 TOXO94900 526 aa20.64■□□□□ 0.89
SHANK2-220ENST00000608988 WDPCPO95876 746 aa20.64■□□□□ 0.89
SHANK2-220ENST00000608988 PCCBP05166 539 aa20.64■□□□□ 0.89
SHANK2-220ENST00000608988 CALCBP10092 127 aa20.64■□□□□ 0.89
SHANK2-220ENST00000608988 CXCL2P19875 107 aa20.64■□□□□ 0.89
SHANK2-220ENST00000608988 RBM34P42696 430 aaKnown RBP20.64■□□□□ 0.89
SHANK2-220ENST00000608988 MAP2K6P52564 334 aa20.64■□□□□ 0.89
SHANK2-220ENST00000608988 PSMA6P60900 246 aaKnown RBP20.64■□□□□ 0.89
SHANK2-220ENST00000608988 NTHL1P78549 312 aa20.64■□□□□ 0.89
SHANK2-220ENST00000608988 TNFRSF17Q02223 184 aa20.64■□□□□ 0.89
SHANK2-220ENST00000608988 DUSP5Q16690 384 aa20.64■□□□□ 0.89
SHANK2-220ENST00000608988 ASB13Q8WXK3 278 aa20.64■□□□□ 0.89
SHANK2-220ENST00000608988 PEX11GQ96HA9 241 aa20.64■□□□□ 0.89
SHANK2-220ENST00000608988 TEX101Q9BY14 249 aa20.64■□□□□ 0.89
SHANK2-220ENST00000608988 NOX3Q9HBY0 568 aa20.64■□□□□ 0.89
SHANK2-220ENST00000608988 POLE3Q9NRF9 147 aa20.64■□□□□ 0.89
SHANK2-220ENST00000608988 AK6Q9Y3D8 172 aaKnown RBP20.64■□□□□ 0.89
SHANK2-220ENST00000608988 MUC22E2RYF6 1773 aaPredicted RBP20.64■□□□□ 0.89
SHANK2-220ENST00000608988 MDC1Q14676 2089 aaKnown RBP20.64■□□□□ 0.89
SHANK2-220ENST00000608988 LTBP2Q14767 1821 aa20.63■□□□□ 0.89
SHANK2-220ENST00000608988 ARPC1BO15143 372 aaKnown RBP20.63■□□□□ 0.89
SHANK2-220ENST00000608988 KHDRBS3O75525 346 aaKnown RBP20.63■□□□□ 0.89
SHANK2-220ENST00000608988 PPM1BO75688 479 aa20.63■□□□□ 0.89
SHANK2-220ENST00000608988 RHOP08100 348 aa20.63■□□□□ 0.89
SHANK2-220ENST00000608988 FUT1P19526 365 aa20.63■□□□□ 0.89
SHANK2-220ENST00000608988 LGALS3BPQ08380 585 aa20.63■□□□□ 0.89
SHANK2-220ENST00000608988 MRPL2Q5T653 305 aaKnown RBP20.63■□□□□ 0.89
SHANK2-220ENST00000608988 ZCCHC12Q6PEW1 402 aa20.63■□□□□ 0.89
SHANK2-220ENST00000608988 ESPNLQ6ZVH7 1005 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms