RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 ENO4A6NNW6 628 aa20.48■□□□□ 0.87
IRF3-228ENST00000601291 H3BN98 237 aa20.48■□□□□ 0.87
IRF3-228ENST00000601291 BCKDKO14874 412 aa20.48■□□□□ 0.87
IRF3-228ENST00000601291 SUSD5O60279 629 aa20.48■□□□□ 0.87
IRF3-228ENST00000601291 CEACAM4O75871 244 aa20.48■□□□□ 0.87
IRF3-228ENST00000601291 POLR2IP36954 125 aaKnown RBP20.48■□□□□ 0.87
IRF3-228ENST00000601291 EIF1P41567 113 aaKnown RBP20.48■□□□□ 0.87
IRF3-228ENST00000601291 TPD52P55327 224 aaPredicted RBP20.48■□□□□ 0.87
IRF3-228ENST00000601291 DSCR4P56555 118 aaPredicted RBP20.48■□□□□ 0.87
IRF3-228ENST00000601291 GPR85P60893 370 aa20.48■□□□□ 0.87
IRF3-228ENST00000601291 KEAP1Q14145 624 aa20.48■□□□□ 0.87
IRF3-228ENST00000601291 RASSF6Q6ZTQ3 369 aa20.48■□□□□ 0.87
IRF3-228ENST00000601291 MEX3DQ86XN8 651 aaKnown RBP20.48■□□□□ 0.87
IRF3-228ENST00000601291 P3H2Q8IVL5 708 aa20.48■□□□□ 0.87
IRF3-228ENST00000601291 CHERPQ8IWX8 916 aaKnown RBP20.48■□□□□ 0.87
IRF3-228ENST00000601291 MDS2Q8NDY4 140 aa20.48■□□□□ 0.87
IRF3-228ENST00000601291 SGTBQ96EQ0 304 aa20.48■□□□□ 0.87
IRF3-228ENST00000601291 C5orf34Q96MH7 638 aa20.48■□□□□ 0.87
IRF3-228ENST00000601291 DCBLD2Q96PD2 775 aa20.48■□□□□ 0.87
IRF3-228ENST00000601291 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.48■□□□□ 0.873e-7■■■□□ 17.6
IRF3-228ENST00000601291 KLF13Q9Y2Y9 288 aaPredicted RBP20.48■□□□□ 0.87
IRF3-228ENST00000601291 A0A0G2JMM0 328 aa20.47■□□□□ 0.87
IRF3-228ENST00000601291 A0A1W2PPB8 328 aa20.47■□□□□ 0.87
IRF3-228ENST00000601291 A0A1W2PRS3 328 aa20.47■□□□□ 0.87
IRF3-228ENST00000601291 UNC119BA6NIH7 251 aa20.47■□□□□ 0.87
IRF3-228ENST00000601291 KIR3DP1A8MWS1 328 aa20.47■□□□□ 0.87
IRF3-228ENST00000601291 EFCAB9A8MZ26 197 aa20.47■□□□□ 0.87
IRF3-228ENST00000601291 SAGP10523 405 aaPredicted RBP20.47■□□□□ 0.87
IRF3-228ENST00000601291 CD46P15529 392 aa20.47■□□□□ 0.87
IRF3-228ENST00000601291 CCNA2P20248 432 aa20.47■□□□□ 0.87
IRF3-228ENST00000601291 DPP4P27487 766 aa20.47■□□□□ 0.87
IRF3-228ENST00000601291 MAP2K6P52564 334 aa20.47■□□□□ 0.87
IRF3-228ENST00000601291 CRISP1P54107 249 aa20.47■□□□□ 0.87
IRF3-228ENST00000601291 IL18R1Q13478 541 aa20.47■□□□□ 0.87
IRF3-228ENST00000601291 ADGRG3Q86Y34 549 aa20.47■□□□□ 0.87
IRF3-228ENST00000601291 GATA6Q92908 595 aa20.47■□□□□ 0.87
IRF3-228ENST00000601291 GNRHR2Q96P88 292 aa20.47■□□□□ 0.87
IRF3-228ENST00000601291 DEPPQ9NTK1 212 aa20.47■□□□□ 0.87
IRF3-228ENST00000601291 GMPPBQ9Y5P6 360 aa20.47■□□□□ 0.87
IRF3-228ENST00000601291 DCHS1Q96JQ0 3298 aa20.47■□□□□ 0.87
IRF3-228ENST00000601291 SOX14O95416 240 aa20.46■□□□□ 0.87
IRF3-228ENST00000601291 MAKP20794 623 aa20.46■□□□□ 0.87
IRF3-228ENST00000601291 MYF6P23409 242 aa20.46■□□□□ 0.87
IRF3-228ENST00000601291 CHMP24386 653 aa20.46■□□□□ 0.87
IRF3-228ENST00000601291 POU1F1P28069 291 aa20.46■□□□□ 0.87
IRF3-228ENST00000601291 RPS6KA3P51812 740 aa20.46■□□□□ 0.87
IRF3-228ENST00000601291 KRT80Q6KB66 452 aa20.46■□□□□ 0.87
IRF3-228ENST00000601291 SLC25A25Q6KCM7 469 aa20.46■□□□□ 0.87
IRF3-228ENST00000601291 C5orf46Q6UWT4 87 aa20.46■□□□□ 0.87
IRF3-228ENST00000601291 LRRC69Q6ZNQ3 347 aa20.46■□□□□ 0.87
IRF3-228ENST00000601291 USP51Q70EK9 711 aa20.46■□□□□ 0.87
IRF3-228ENST00000601291 MARVELD2Q8N4S9 558 aa20.46■□□□□ 0.87
IRF3-228ENST00000601291 SERINC1Q9NRX5 453 aa20.46■□□□□ 0.87
IRF3-228ENST00000601291 CHRNA9Q9UGM1 479 aa20.46■□□□□ 0.87
IRF3-228ENST00000601291 TMEM72A0PK05 275 aa20.46■□□□□ 0.87
IRF3-228ENST00000601291 A8MVM7 634 aa20.46■□□□□ 0.87
IRF3-228ENST00000601291 CDC42EP2O14613 210 aa20.46■□□□□ 0.87
IRF3-228ENST00000601291 NME2P1O60361 137 aa20.46■□□□□ 0.87
IRF3-228ENST00000601291 SP1P08047 785 aa20.46■□□□□ 0.87
IRF3-228ENST00000601291 GNAO1P09471 354 aa20.46■□□□□ 0.87
IRF3-228ENST00000601291 HK1P19367 917 aa20.46■□□□□ 0.87
IRF3-228ENST00000601291 NME2P22392 152 aa20.46■□□□□ 0.87
IRF3-228ENST00000601291 ADH6P28332 368 aa20.46■□□□□ 0.87
IRF3-228ENST00000601291 IGFL2Q6UWQ7 119 aa20.46■□□□□ 0.87
IRF3-228ENST00000601291 C8orf59Q8N0T1 100 aaPredicted RBP20.46■□□□□ 0.87
IRF3-228ENST00000601291 OR2M7Q8NG81 312 aa20.46■□□□□ 0.87
IRF3-228ENST00000601291 TEX47Q8TBZ9 253 aa20.46■□□□□ 0.87
IRF3-228ENST00000601291 STK35Q8TDR2 534 aa20.46■□□□□ 0.87
IRF3-228ENST00000601291 HRASLS5Q96KN8 279 aa20.46■□□□□ 0.87
IRF3-228ENST00000601291 PITX2Q99697 317 aa20.46■□□□□ 0.87
IRF3-228ENST00000601291 APOL4Q9BPW4 351 aa20.46■□□□□ 0.87
IRF3-228ENST00000601291 ZFP64Q9NPA5 681 aa20.46■□□□□ 0.87
IRF3-228ENST00000601291 TUBA8Q9NY65 449 aaPredicted RBP20.46■□□□□ 0.87
IRF3-228ENST00000601291 NDRG4Q9ULP0 352 aaKnown RBP20.46■□□□□ 0.87
IRF3-228ENST00000601291 SPIN1Q9Y657 262 aaPredicted RBP20.46■□□□□ 0.87
IRF3-228ENST00000601291 LRRC3CA6NJW4 275 aa20.45■□□□□ 0.86
IRF3-228ENST00000601291 CLIC3O95833 236 aa20.45■□□□□ 0.86
IRF3-228ENST00000601291 EPHA2P29317 976 aa20.45■□□□□ 0.86
IRF3-228ENST00000601291 EGR4Q05215 589 aa20.45■□□□□ 0.86
IRF3-228ENST00000601291 PDK3Q15120 406 aa20.45■□□□□ 0.86
IRF3-228ENST00000601291 PTGES3Q15185 160 aaKnown RBP20.45■□□□□ 0.86
IRF3-228ENST00000601291 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.45■□□□□ 0.86
IRF3-228ENST00000601291 RPL13AP3Q6NVV1 102 aa20.45■□□□□ 0.86
IRF3-228ENST00000601291 C10orf53Q8N6V4 93 aa20.45■□□□□ 0.86
IRF3-228ENST00000601291 CLDN22Q8N7P3 220 aa20.45■□□□□ 0.86
IRF3-228ENST00000601291 SETD9Q8NE22 299 aa20.45■□□□□ 0.86
IRF3-228ENST00000601291 ZNF570Q96NI8 536 aa20.45■□□□□ 0.86
IRF3-228ENST00000601291 MUS81Q96NY9 551 aa20.45■□□□□ 0.86
IRF3-228ENST00000601291 KLHL1Q9NR64 748 aa20.45■□□□□ 0.86
IRF3-228ENST00000601291 B4GALT7Q9UBV7 327 aa20.45■□□□□ 0.86
IRF3-228ENST00000601291 CDH10Q9Y6N8 788 aa20.45■□□□□ 0.86
IRF3-228ENST00000601291 TRAV36DV7A0A075B6V5 113 aa20.44■□□□□ 0.86
IRF3-228ENST00000601291 KLRC4-KLRK1H3BQV0 150 aa20.44■□□□□ 0.86
IRF3-228ENST00000601291 ZNF208O43345 1280 aa20.44■□□□□ 0.86
IRF3-228ENST00000601291 CH25HO95992 272 aa20.44■□□□□ 0.86
IRF3-228ENST00000601291 TP53P04637 393 aaPredicted RBP20.44■□□□□ 0.86
IRF3-228ENST00000601291 SRD5A2P31213 254 aa20.44■□□□□ 0.86
IRF3-228ENST00000601291 SLC9A3P48764 834 aa20.44■□□□□ 0.86
IRF3-228ENST00000601291 TLE3Q04726 772 aa20.44■□□□□ 0.86
IRF3-228ENST00000601291 ZNF691Q5VV52 312 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms