RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 SDHCQ99643 169 aaPredicted RBP10.63□□□□□ -0.71
ARHGEF1-220ENST00000600274 ARHGAP9Q9BRR9 750 aa10.63□□□□□ -0.71
ARHGEF1-220ENST00000600274 WACQ9BTA9 647 aa10.63□□□□□ -0.71
ARHGEF1-220ENST00000600274 KDM4EB2RXH2 506 aaPredicted RBP10.63□□□□□ -0.71
ARHGEF1-220ENST00000600274 WNT1P04628 370 aa10.63□□□□□ -0.71
ARHGEF1-220ENST00000600274 NGFRP08138 427 aa10.63□□□□□ -0.71
ARHGEF1-220ENST00000600274 SLC35E2P0CK97 266 aa10.63□□□□□ -0.71
ARHGEF1-220ENST00000600274 ZNF3P17036 446 aa10.63□□□□□ -0.71
ARHGEF1-220ENST00000600274 RPS27P42677 84 aaKnown RBP10.63□□□□□ -0.71
ARHGEF1-220ENST00000600274 CTBP2P56545 445 aa10.63□□□□□ -0.71
ARHGEF1-220ENST00000600274 OR10A3P58181 314 aa10.63□□□□□ -0.71
ARHGEF1-220ENST00000600274 GAS6Q14393 721 aa10.63□□□□□ -0.71
ARHGEF1-220ENST00000600274 CEBPEQ15744 281 aa10.63□□□□□ -0.71
ARHGEF1-220ENST00000600274 ZNF322Q6U7Q0 402 aaPredicted RBP10.63□□□□□ -0.71
ARHGEF1-220ENST00000600274 MEPCEQ7L2J0 689 aaKnown RBP10.63□□□□□ -0.71
ARHGEF1-220ENST00000600274 MSLNLQ96KJ4 702 aa10.63□□□□□ -0.71
ARHGEF1-220ENST00000600274 TSSK2Q96PF2 358 aa10.63□□□□□ -0.71
ARHGEF1-220ENST00000600274 ZNF222Q9UK12 451 aa10.63□□□□□ -0.71
ARHGEF1-220ENST00000600274 NCOR1O75376 2440 aa10.63□□□□□ -0.71
ARHGEF1-220ENST00000600274 A0A0B4J203 849 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 TMEM129A0AVI4 362 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 CD38P28907 300 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 GABRA5P31644 462 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 OR1D5P58170 312 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 ZNF79Q15937 498 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 WDR45BQ5MNZ6 344 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 FHL5Q5TD97 284 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 NIPAL3Q6P499 406 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 CEACAM19Q7Z692 300 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 PTP4A1Q93096 173 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 RASD2Q96D21 266 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 NMNAT3Q96T66 252 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 MIXL1Q9H2W2 232 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 NKIRAS2Q9NYR9 191 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 PLEKHB1Q9UF11 243 aaPredicted RBP10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 GTF2A1LQ9UNN4 478 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 TMEM150CB9EJG8 249 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 HCN1O60741 890 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 F13BP05160 661 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 MAGEB1P43366 347 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 MGAT2Q10469 447 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 ELOCQ15369 112 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 OR5M10Q6IEU7 315 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 IQCF2Q8IXL9 164 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 ELMOD2Q8IZ81 293 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 Q8N402 240 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 POGLUT1Q8NBL1 392 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 SNX33Q8WV41 574 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 SMPDL3BQ92485 455 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 TEAD3Q99594 435 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 ELF4Q99607 663 aaPredicted RBP10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 OR10A5Q9H207 317 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 GNG8Q9UK08 70 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 TBC1D24Q9ULP9 559 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 SPEF1Q9Y4P9 236 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 MTCH2Q9Y6C9 303 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 IRGMA1A4Y4 181 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 FOXS1O43638 330 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 OR2B3O76000 313 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 HOXC4P09017 264 aaPredicted RBP10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 HIST1H1CP16403 213 aaKnown RBP10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 ENDOUP21128 410 aaKnown RBP10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 GAS1P54826 345 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 ZSWIM7Q19AV6 140 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 BTBD16Q32M84 506 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 VWA2Q5GFL6 755 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 LYPD8Q6UX82 237 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 NPSR1Q6W5P4 371 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 CHRDL2Q6WN34 429 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 ZNF433Q8N7K0 673 aaPredicted RBP10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 SAMD12Q8N8I0 201 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 C17orf47Q8NEP4 570 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 IL17RDQ8NFM7 739 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 SNAPC3Q92966 411 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 OR2B2Q9GZK3 357 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 PDE7BQ9NP56 450 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 FGF20Q9NP95 211 aaPredicted RBP10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 SIGLEC7Q9Y286 467 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 V9GYH0 126 aa10.62□□□□□ -0.71
ARHGEF1-220ENST00000600274 MCIDASD6RGH6 385 aa10.61□□□□□ -0.71
ARHGEF1-220ENST00000600274 THBS1P07996 1170 aa10.61□□□□□ -0.71
ARHGEF1-220ENST00000600274 HTR3AP46098 478 aa10.61□□□□□ -0.71
ARHGEF1-220ENST00000600274 ZP2Q05996 745 aa10.61□□□□□ -0.71
ARHGEF1-220ENST00000600274 FAM209AQ5JX71 171 aa10.61□□□□□ -0.71
ARHGEF1-220ENST00000600274 GDPGP1Q6ZNW5 385 aa10.61□□□□□ -0.71
ARHGEF1-220ENST00000600274 OR5W2Q8NH69 310 aa10.61□□□□□ -0.71
ARHGEF1-220ENST00000600274 ASB12Q8WXK4 309 aa10.61□□□□□ -0.71
ARHGEF1-220ENST00000600274 AP3S1Q92572 193 aa10.61□□□□□ -0.71
ARHGEF1-220ENST00000600274 SLC25A36Q96CQ1 311 aa10.61□□□□□ -0.71
ARHGEF1-220ENST00000600274 FRMD6Q96NE9 622 aa10.61□□□□□ -0.71
ARHGEF1-220ENST00000600274 ZFP3Q96NJ6 502 aa10.61□□□□□ -0.71
ARHGEF1-220ENST00000600274 NDC1Q9BTX1 674 aa10.61□□□□□ -0.71
ARHGEF1-220ENST00000600274 C11orf54Q9H0W9 315 aaPredicted RBP10.61□□□□□ -0.71
ARHGEF1-220ENST00000600274 SRA1Q9HD15 236 aaKnown RBP10.61□□□□□ -0.71
ARHGEF1-220ENST00000600274 MKKSQ9NPJ1 570 aaPredicted RBP10.61□□□□□ -0.71
ARHGEF1-220ENST00000600274 HEATR5AQ86XA9 2040 aa10.61□□□□□ -0.71
ARHGEF1-220ENST00000600274 ELOA3DA6NLF2 546 aaPredicted RBP10.61□□□□□ -0.71
ARHGEF1-220ENST00000600274 C11orf98E9PRG8 122 aa10.61□□□□□ -0.71
ARHGEF1-220ENST00000600274 AKR7A2O43488 359 aa10.61□□□□□ -0.71
ARHGEF1-220ENST00000600274 IL1AP01583 271 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms