RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 KISS1RQ969F8 398 aaPredicted RBP20.28■□□□□ 0.84
CCDC61-207ENST00000599044 ARL5BQ96KC2 179 aa20.28■□□□□ 0.84
CCDC61-207ENST00000599044 CCDC134Q9H6E4 229 aa20.28■□□□□ 0.84
CCDC61-207ENST00000599044 SERINC1Q9NRX5 453 aa20.28■□□□□ 0.84
CCDC61-207ENST00000599044 SLC35A3Q9Y2D2 325 aa20.28■□□□□ 0.84
CCDC61-207ENST00000599044 CSPG4Q6UVK1 2322 aa20.27■□□□□ 0.84
CCDC61-207ENST00000599044 SULT2B1O00204 365 aa20.27■□□□□ 0.84
CCDC61-207ENST00000599044 AP3D1O14617 1153 aa20.27■□□□□ 0.84
CCDC61-207ENST00000599044 SMAD7O15105 426 aaKnown RBP20.27■□□□□ 0.84
CCDC61-207ENST00000599044 LYZL6O75951 148 aa20.27■□□□□ 0.84
CCDC61-207ENST00000599044 CHRM4P08173 479 aa20.27■□□□□ 0.84
CCDC61-207ENST00000599044 NTF4P34130 210 aa20.27■□□□□ 0.84
CCDC61-207ENST00000599044 ITGADQ13349 1161 aa20.27■□□□□ 0.84
CCDC61-207ENST00000599044 P2RY6Q15077 328 aa20.27■□□□□ 0.84
CCDC61-207ENST00000599044 COX20Q5RI15 118 aa20.27■□□□□ 0.84
CCDC61-207ENST00000599044 NCMAPQ5T1S8 102 aa20.27■□□□□ 0.84
CCDC61-207ENST00000599044 Q6ZT83 130 aa20.27■□□□□ 0.84
CCDC61-207ENST00000599044 ADGRG3Q86Y34 549 aa20.27■□□□□ 0.84
CCDC61-207ENST00000599044 ZNF611Q8N823 705 aa20.27■□□□□ 0.84
CCDC61-207ENST00000599044 ZNF563Q8TA94 476 aa20.27■□□□□ 0.84
CCDC61-207ENST00000599044 PANX1Q96RD7 426 aa20.27■□□□□ 0.84
CCDC61-207ENST00000599044 TACO1Q9BSH4 297 aaKnown RBP20.27■□□□□ 0.84
CCDC61-207ENST00000599044 OR11A1Q9GZK7 315 aa20.27■□□□□ 0.84
CCDC61-207ENST00000599044 SLC38A1Q9H2H9 487 aa20.27■□□□□ 0.84
CCDC61-207ENST00000599044 SLC6A13Q9NSD5 602 aa20.27■□□□□ 0.84
CCDC61-207ENST00000599044 USH1CQ9Y6N9 552 aa20.27■□□□□ 0.84
CCDC61-207ENST00000599044 FREM1Q5H8C1 2179 aa20.27■□□□□ 0.83
CCDC61-207ENST00000599044 SLCO1B7G3V0H7 640 aa20.26■□□□□ 0.83
CCDC61-207ENST00000599044 PGRP06401 933 aa20.26■□□□□ 0.83
CCDC61-207ENST00000599044 TFPIP10646 304 aa20.26■□□□□ 0.83
CCDC61-207ENST00000599044 CCNA2P20248 432 aa20.26■□□□□ 0.83
CCDC61-207ENST00000599044 APOBEC1P41238 236 aaKnown RBP20.26■□□□□ 0.83
CCDC61-207ENST00000599044 ZNF621Q6ZSS3 439 aa20.26■□□□□ 0.83
CCDC61-207ENST00000599044 BHLHA15Q7RTS1 189 aaPredicted RBP20.26■□□□□ 0.83
CCDC61-207ENST00000599044 SPATA19Q7Z5L4 167 aa20.26■□□□□ 0.83
CCDC61-207ENST00000599044 PNPT1Q8TCS8 783 aaKnown RBP20.26■□□□□ 0.83
CCDC61-207ENST00000599044 HSD17B8Q92506 261 aa20.26■□□□□ 0.83
CCDC61-207ENST00000599044 OR52E6Q96RD3 313 aa20.26■□□□□ 0.83
CCDC61-207ENST00000599044 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.26■□□□□ 0.83
CCDC61-207ENST00000599044 ZNF701Q9NV72 531 aaPredicted RBP20.26■□□□□ 0.83
CCDC61-207ENST00000599044 DPRXA6NFQ7 191 aa20.25■□□□□ 0.83
CCDC61-207ENST00000599044 ZNF724A8MTY0 619 aa20.25■□□□□ 0.83
CCDC61-207ENST00000599044 POLR3GO15318 223 aaPredicted RBP20.25■□□□□ 0.83
CCDC61-207ENST00000599044 CLOCKO15516 846 aa20.25■□□□□ 0.83
CCDC61-207ENST00000599044 RAMP1O60894 148 aa20.25■□□□□ 0.83
CCDC61-207ENST00000599044 PAX1P15863 534 aa20.25■□□□□ 0.83
CCDC61-207ENST00000599044 IGHV1-2P23083 117 aa20.25■□□□□ 0.83
CCDC61-207ENST00000599044 IDH2P48735 452 aaKnown RBP20.25■□□□□ 0.83
CCDC61-207ENST00000599044 CAPRIN1Q14444 709 aaKnown RBP20.25■□□□□ 0.83
CCDC61-207ENST00000599044 MAPK11Q15759 364 aa20.25■□□□□ 0.83
CCDC61-207ENST00000599044 SLC9B1Q4ZJI4 515 aa20.25■□□□□ 0.83
CCDC61-207ENST00000599044 ABLIM2Q6H8Q1 611 aa20.25■□□□□ 0.83
CCDC61-207ENST00000599044 MTDHQ86UE4 582 aaKnown RBP20.25■□□□□ 0.83
CCDC61-207ENST00000599044 TMEM171Q8WVE6 324 aa20.25■□□□□ 0.83
CCDC61-207ENST00000599044 OIT3Q8WWZ8 545 aa20.25■□□□□ 0.83
CCDC61-207ENST00000599044 THOC1Q96FV9 657 aaKnown RBP20.25■□□□□ 0.83
CCDC61-207ENST00000599044 CHRNA9Q9UGM1 479 aa20.25■□□□□ 0.83
CCDC61-207ENST00000599044 LAMP3Q9UQV4 416 aa20.25■□□□□ 0.83
CCDC61-207ENST00000599044 ZNF716A6NP11 495 aa20.24■□□□□ 0.83
CCDC61-207ENST00000599044 IGHV3-9P01782 118 aa20.24■□□□□ 0.83
CCDC61-207ENST00000599044 HEXAP06865 529 aa20.24■□□□□ 0.83
CCDC61-207ENST00000599044 ADAM5Q6NVV9 412 aa20.24■□□□□ 0.83
CCDC61-207ENST00000599044 GRINAQ7Z429 371 aa20.24■□□□□ 0.83
CCDC61-207ENST00000599044 CCDC103Q8IW40 242 aa20.24■□□□□ 0.83
CCDC61-207ENST00000599044 SLC25A43Q8WUT9 341 aaPredicted RBP20.24■□□□□ 0.83
CCDC61-207ENST00000599044 TRNT1Q96Q11 434 aaKnown RBP20.24■□□□□ 0.83
CCDC61-207ENST00000599044 EXOSC3Q9NQT5 275 aaKnown RBP20.24■□□□□ 0.83
CCDC61-207ENST00000599044 FGFR1OP2Q9NVK5 253 aa20.24■□□□□ 0.83
CCDC61-207ENST00000599044 RNF115Q9Y4L5 304 aa20.24■□□□□ 0.83
CCDC61-207ENST00000599044 IGKV3D-15A0A087WSY6 115 aa20.23■□□□□ 0.83
CCDC61-207ENST00000599044 AGAP5A6NIR3 686 aa20.23■□□□□ 0.83
CCDC61-207ENST00000599044 TRPC5OSA6NMA1 111 aa20.23■□□□□ 0.83
CCDC61-207ENST00000599044 CNOT4O95628 575 aaKnown RBP20.23■□□□□ 0.83
CCDC61-207ENST00000599044 SOD3P08294 240 aa20.23■□□□□ 0.83
CCDC61-207ENST00000599044 VIMP08670 466 aaKnown RBP20.23■□□□□ 0.83
CCDC61-207ENST00000599044 CSNK2A1P68400 391 aaPredicted RBP20.23■□□□□ 0.83
CCDC61-207ENST00000599044 BSPH1Q075Z2 132 aa20.23■□□□□ 0.83
CCDC61-207ENST00000599044 STK11Q15831 433 aa20.23■□□□□ 0.83
CCDC61-207ENST00000599044 GALNT5Q7Z7M9 940 aa20.23■□□□□ 0.83
CCDC61-207ENST00000599044 MAELQ96JY0 434 aaKnown RBP20.23■□□□□ 0.83
CCDC61-207ENST00000599044 ZNF317Q96PQ6 595 aaPredicted RBP20.23■□□□□ 0.83
CCDC61-207ENST00000599044 BDH2Q9BUT1 245 aa20.23■□□□□ 0.83
CCDC61-207ENST00000599044 POTEKPQ9BYX7 375 aa20.23■□□□□ 0.83
CCDC61-207ENST00000599044 USF3Q68DE3 2245 aa20.22■□□□□ 0.83
CCDC61-207ENST00000599044 HIVEP2P31629 2446 aa20.22■□□□□ 0.83
CCDC61-207ENST00000599044 PMS2P2O95744 297 aa20.22■□□□□ 0.83
CCDC61-207ENST00000599044 CD3EP07766 207 aa20.22■□□□□ 0.83
CCDC61-207ENST00000599044 DANCRP0C864 163 aa20.22■□□□□ 0.83
CCDC61-207ENST00000599044 COX5AP20674 150 aa20.22■□□□□ 0.83
CCDC61-207ENST00000599044 RPS4Y1P22090 263 aaKnown RBP20.22■□□□□ 0.83
CCDC61-207ENST00000599044 MVDP53602 400 aa20.22■□□□□ 0.83
CCDC61-207ENST00000599044 HPCAP84074 193 aa20.22■□□□□ 0.83
CCDC61-207ENST00000599044 CGB2Q6NT52 195 aa20.22■□□□□ 0.83
CCDC61-207ENST00000599044 EPGNQ6UW88 154 aa20.22■□□□□ 0.83
CCDC61-207ENST00000599044 LRRC74BQ6ZQY2 392 aa20.22■□□□□ 0.83
CCDC61-207ENST00000599044 ZNF100Q8IYN0 542 aa20.22■□□□□ 0.83
CCDC61-207ENST00000599044 KBTBD8Q8NFY9 601 aa20.22■□□□□ 0.83
CCDC61-207ENST00000599044 OR52B2Q96RD2 323 aa20.22■□□□□ 0.83
CCDC61-207ENST00000599044 CXorf56Q9H5V9 222 aa20.22■□□□□ 0.83
CCDC61-207ENST00000599044 ESRP2Q9H6T0 727 aaKnown RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms