RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 SLC38A1Q9H2H9 487 aa9.46□□□□□ -0.9
SMG9-207ENST00000598860 CDCP1Q9H5V8 836 aa9.46□□□□□ -0.9
SMG9-207ENST00000598860 EVA1AQ9H8M9 152 aa9.46□□□□□ -0.9
SMG9-207ENST00000598860 GORASP2Q9H8Y8 452 aa9.46□□□□□ -0.9
SMG9-207ENST00000598860 SLC7A8Q9UHI5 535 aa9.46□□□□□ -0.9
SMG9-207ENST00000598860 PACSIN3Q9UKS6 424 aa9.46□□□□□ -0.9
SMG9-207ENST00000598860 IFT52Q9Y366 437 aa9.46□□□□□ -0.9
SMG9-207ENST00000598860 KCNE3Q9Y6H6 103 aa9.46□□□□□ -0.9
SMG9-207ENST00000598860 SMG1Q96Q15 3661 aaKnown RBP9.45□□□□□ -0.9
SMG9-207ENST00000598860 A8MUI8 341 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 ARPC2O15144 300 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 NME6O75414 186 aaPredicted RBP9.45□□□□□ -0.9
SMG9-207ENST00000598860 OR2J2O76002 312 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 DBIP07108 87 aaKnown RBP9.45□□□□□ -0.9
SMG9-207ENST00000598860 CHRM4P08173 479 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 HOXB6P17509 224 aaKnown RBP9.45□□□□□ -0.9
SMG9-207ENST00000598860 KDELR2P33947 212 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 KCNJ5P48544 419 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 ATP12AP54707 1039 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 MLLT10P55197 1068 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 KCNJ2P63252 427 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 FLOT2Q14254 428 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 NTRK2Q16620 822 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 CCNJQ5T5M9 372 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 LCE1DQ5T752 114 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 AGAP7PQ5VUJ5 663 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 TYW3Q6IPR3 259 aaKnown RBP9.45□□□□□ -0.9
SMG9-207ENST00000598860 ZNF529Q6P280 563 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 IGFL3Q6UXB1 125 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 ISLR2Q6UXK2 745 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 NUP54Q7Z3B4 507 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 DHFR2Q86XF0 187 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 PEX5LQ8IYB4 626 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 C10orf67Q8IYJ2 551 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 TMEM156Q8N614 296 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 SIRT6Q8N6T7 355 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 RBMXL3Q8N7X1 1067 aaKnown RBP9.45□□□□□ -0.9
SMG9-207ENST00000598860 RNF152Q8N8N0 203 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 OR4N2Q8NGD1 307 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 SPPL2AQ8TCT8 520 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 SLC26A7Q8TE54 656 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 LZICQ8WZA0 190 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 PSMF1Q92530 271 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 FIG4Q92562 907 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 TMCO6Q96DC7 493 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 COL21A1Q96P44 957 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 AGAP4Q96P64 663 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 LMF1Q96S06 567 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 WDR12Q9GZL7 423 aaKnown RBP9.45□□□□□ -0.9
SMG9-207ENST00000598860 ARMC7Q9H6L4 198 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 MTHFD2LQ9H903 347 aaPredicted RBP9.45□□□□□ -0.9
SMG9-207ENST00000598860 SACM1LQ9NTJ5 587 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 HPF1Q9NWY4 346 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 ADPRHL2Q9NX46 363 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 RPS6KA6Q9UK32 745 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 ABCG2Q9UNQ0 655 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 SAMD4AQ9UPU9 718 aaKnown RBP9.45□□□□□ -0.9
SMG9-207ENST00000598860 POMPQ9Y244 141 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 LRCH1Q9Y2L9 728 aa9.45□□□□□ -0.9
SMG9-207ENST00000598860 A0A1W2PQD3 144 aa9.44□□□□□ -0.9
SMG9-207ENST00000598860 A0A1W2PRX2 142 aa9.44□□□□□ -0.9
SMG9-207ENST00000598860 PRSS29PA6NIE9 313 aa9.44□□□□□ -0.9
SMG9-207ENST00000598860 AGAP5A6NIR3 686 aa9.44□□□□□ -0.9
SMG9-207ENST00000598860 AQP12BA6NM10 295 aa9.44□□□□□ -0.9
SMG9-207ENST00000598860 CNOT4O95628 575 aaKnown RBP9.44□□□□□ -0.9
SMG9-207ENST00000598860 HPGDP15428 266 aa9.44□□□□□ -0.9
SMG9-207ENST00000598860 RPS4Y1P22090 263 aaKnown RBP9.44□□□□□ -0.9
SMG9-207ENST00000598860 DCTP40126 519 aa9.44□□□□□ -0.9
SMG9-207ENST00000598860 RFX3P48380 749 aa9.44□□□□□ -0.9
SMG9-207ENST00000598860 CLK3P49761 638 aaKnown RBP9.44□□□□□ -0.9
SMG9-207ENST00000598860 RAC3P60763 192 aa9.44□□□□□ -0.9
SMG9-207ENST00000598860 MFAP5Q13361 173 aa9.44□□□□□ -0.9
SMG9-207ENST00000598860 LARS2Q15031 903 aaKnown RBP9.44□□□□□ -0.9
SMG9-207ENST00000598860 GPR68Q15743 365 aa9.44□□□□□ -0.9
SMG9-207ENST00000598860 MAPK11Q15759 364 aa9.44□□□□□ -0.9
SMG9-207ENST00000598860 ZNF141Q15928 474 aa9.44□□□□□ -0.9
SMG9-207ENST00000598860 ZNF791Q3KP31 576 aaPredicted RBP9.44□□□□□ -0.9
SMG9-207ENST00000598860 LIN52Q52LA3 116 aa9.44□□□□□ -0.9
SMG9-207ENST00000598860 LRRC23Q53EV4 343 aaPredicted RBP9.44□□□□□ -0.9
SMG9-207ENST00000598860 EIPR1Q53HC9 387 aa9.44□□□□□ -0.9
SMG9-207ENST00000598860 C1orf146Q5VVC0 180 aa9.44□□□□□ -0.9
SMG9-207ENST00000598860 TMEM81Q6P7N7 255 aa9.44□□□□□ -0.9
SMG9-207ENST00000598860 RTL4Q6ZR62 310 aa9.44□□□□□ -0.9
SMG9-207ENST00000598860 AQP12AQ8IXF9 295 aa9.44□□□□□ -0.9
SMG9-207ENST00000598860 WDR60Q8WVS4 1066 aa9.44□□□□□ -0.9
SMG9-207ENST00000598860 PNPLA2Q96AD5 504 aa9.44□□□□□ -0.9
SMG9-207ENST00000598860 EFHD2Q96C19 240 aaPredicted RBP9.44□□□□□ -0.9
SMG9-207ENST00000598860 PCDHAC1Q9H158 963 aa9.44□□□□□ -0.9
SMG9-207ENST00000598860 LIN28AQ9H9Z2 209 aaKnown RBP9.44□□□□□ -0.9
SMG9-207ENST00000598860 UBQLN4Q9NRR5 601 aa9.44□□□□□ -0.9
SMG9-207ENST00000598860 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.44□□□□□ -0.9
SMG9-207ENST00000598860 OLAHQ9NV23 265 aa9.44□□□□□ -0.9
SMG9-207ENST00000598860 SEC14L3Q9UDX4 400 aa9.44□□□□□ -0.9
SMG9-207ENST00000598860 BAG5Q9UL15 447 aa9.44□□□□□ -0.9
SMG9-207ENST00000598860 USP22Q9UPT9 525 aa9.44□□□□□ -0.9
SMG9-207ENST00000598860 B3GNT3Q9Y2A9 372 aa9.44□□□□□ -0.9
SMG9-207ENST00000598860 TENM4Q6N022 2769 aa9.44□□□□□ -0.9
SMG9-207ENST00000598860 PRRC2CQ9Y520 2896 aaKnown RBP9.43□□□□□ -0.9
SMG9-207ENST00000598860 NPIPB9F8W1W9 429 aa9.43□□□□□ -0.9
SMG9-207ENST00000598860 H3BNH8 94 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms