RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 ARSKQ6UWY0 536 aa14.02□□□□□ -0.17
UPF1-206ENST00000598471 ZADH2Q8N4Q0 377 aa14.02□□□□□ -0.17
UPF1-206ENST00000598471 FAM98AQ8NCA5 519 aaKnown RBP14.02□□□□□ -0.17
UPF1-206ENST00000598471 SCMH1Q96GD3 660 aa14.02□□□□□ -0.17
UPF1-206ENST00000598471 CRELD1Q96HD1 420 aa14.02□□□□□ -0.17
UPF1-206ENST00000598471 GNRHR2Q96P88 292 aa14.02□□□□□ -0.17
UPF1-206ENST00000598471 KLHDC3Q9BQ90 382 aa14.02□□□□□ -0.17
UPF1-206ENST00000598471 UCK2Q9BZX2 261 aa14.02□□□□□ -0.17
UPF1-206ENST00000598471 KLHL1Q9NR64 748 aa14.02□□□□□ -0.17
UPF1-206ENST00000598471 TUBA8Q9NY65 449 aaPredicted RBP14.02□□□□□ -0.17
UPF1-206ENST00000598471 TMEFF2Q9UIK5 374 aaPredicted RBP14.02□□□□□ -0.17
UPF1-206ENST00000598471 TMED7Q9Y3B3 224 aa14.02□□□□□ -0.17
UPF1-206ENST00000598471 HRH3Q9Y5N1 445 aa14.02□□□□□ -0.17
UPF1-206ENST00000598471 CEP295Q9C0D2 2601 aa14.02□□□□□ -0.17
UPF1-206ENST00000598471 C7orf72A4D263 438 aa14.01□□□□□ -0.17
UPF1-206ENST00000598471 LRRC3CA6NJW4 275 aa14.01□□□□□ -0.17
UPF1-206ENST00000598471 SUSD5O60279 629 aa14.01□□□□□ -0.17
UPF1-206ENST00000598471 PIP5K1CO60331 668 aa14.01□□□□□ -0.17
UPF1-206ENST00000598471 IGF2P01344 180 aa14.01□□□□□ -0.17
UPF1-206ENST00000598471 POU2F1P14859 743 aa14.01□□□□□ -0.17
UPF1-206ENST00000598471 FPR3P25089 353 aa14.01□□□□□ -0.17
UPF1-206ENST00000598471 FKBP2P26885 142 aaKnown RBP14.01□□□□□ -0.17
UPF1-206ENST00000598471 OMPP47874 163 aa14.01□□□□□ -0.17
UPF1-206ENST00000598471 CTBP2P56545 445 aa14.01□□□□□ -0.17
UPF1-206ENST00000598471 PLGLB1Q02325 96 aa14.01□□□□□ -0.17
UPF1-206ENST00000598471 CRYZQ08257 329 aaKnown RBP14.01□□□□□ -0.17
UPF1-206ENST00000598471 TSPAN31Q12999 210 aa14.01□□□□□ -0.17
UPF1-206ENST00000598471 TOMM20Q15388 145 aa14.01□□□□□ -0.17
UPF1-206ENST00000598471 GLYR1Q49A26 553 aaPredicted RBP14.01□□□□□ -0.17
UPF1-206ENST00000598471 CD300LDQ6UXZ3 194 aa14.01□□□□□ -0.17
UPF1-206ENST00000598471 PRICKLE2Q7Z3G6 844 aa14.01□□□□□ -0.17
UPF1-206ENST00000598471 GALNTL5Q7Z4T8 443 aa14.01□□□□□ -0.17
UPF1-206ENST00000598471 ZER1Q7Z7L7 766 aa14.01□□□□□ -0.17
UPF1-206ENST00000598471 GALNT5Q7Z7M9 940 aa14.01□□□□□ -0.17
UPF1-206ENST00000598471 SULF2Q8IWU5 870 aa14.01□□□□□ -0.17
UPF1-206ENST00000598471 PARP8Q8N3A8 854 aa14.01□□□□□ -0.17
UPF1-206ENST00000598471 DHRSXQ8N5I4 330 aa14.01□□□□□ -0.17
UPF1-206ENST00000598471 ZNF555Q8NEP9 628 aa14.01□□□□□ -0.17
UPF1-206ENST00000598471 FAM46AQ96IP4 442 aaKnown RBP14.01□□□□□ -0.17
UPF1-206ENST00000598471 NIPSNAP1Q9BPW8 284 aa14.01□□□□□ -0.17
UPF1-206ENST00000598471 DEPPQ9NTK1 212 aa14.01□□□□□ -0.17
UPF1-206ENST00000598471 RAB26Q9ULW5 256 aa14.01□□□□□ -0.17
UPF1-206ENST00000598471 FREM2Q5SZK8 3169 aa14.01□□□□□ -0.17
UPF1-206ENST00000598471 MED13Q9UHV7 2174 aa14□□□□□ -0.17
UPF1-206ENST00000598471 ACACBO00763 2458 aa14□□□□□ -0.17
UPF1-206ENST00000598471 ENO4A6NNW6 628 aa14□□□□□ -0.17
UPF1-206ENST00000598471 A8MVM7 634 aa14□□□□□ -0.17
UPF1-206ENST00000598471 B4DXG7 233 aa14□□□□□ -0.17
UPF1-206ENST00000598471 ACOT7O00154 380 aa14□□□□□ -0.17
UPF1-206ENST00000598471 NTN1O95631 604 aa14□□□□□ -0.17
UPF1-206ENST00000598471 SNAP29O95721 258 aa14□□□□□ -0.17
UPF1-206ENST00000598471 ZNF17P17021 662 aa14□□□□□ -0.17
UPF1-206ENST00000598471 CCNA2P20248 432 aa14□□□□□ -0.17
UPF1-206ENST00000598471 PTNP21246 168 aa14□□□□□ -0.17
UPF1-206ENST00000598471 GDF1P27539 372 aa14□□□□□ -0.17
UPF1-206ENST00000598471 ELK4P28324 431 aa14□□□□□ -0.17
UPF1-206ENST00000598471 GPR4P46093 362 aa14□□□□□ -0.17
UPF1-206ENST00000598471 GSSP48637 474 aa14□□□□□ -0.17
UPF1-206ENST00000598471 MEOX1P50221 254 aa14□□□□□ -0.17
UPF1-206ENST00000598471 SELENBP1Q13228 472 aa14□□□□□ -0.17
UPF1-206ENST00000598471 TAF11Q15544 211 aa14□□□□□ -0.17
UPF1-206ENST00000598471 RAET1LQ5VY80 246 aa14□□□□□ -0.17
UPF1-206ENST00000598471 ANKRD34AQ69YU3 496 aa14□□□□□ -0.17
UPF1-206ENST00000598471 IGFL3Q6UXB1 125 aa14□□□□□ -0.17
UPF1-206ENST00000598471 GTPBP8Q8N3Z3 284 aaPredicted RBP14□□□□□ -0.17
UPF1-206ENST00000598471 PFN4Q8NHR9 129 aa14□□□□□ -0.17
UPF1-206ENST00000598471 STK35Q8TDR2 534 aa14□□□□□ -0.17
UPF1-206ENST00000598471 DDIT4LQ96D03 193 aa14□□□□□ -0.17
UPF1-206ENST00000598471 BPIFA2Q96DR5 249 aa14□□□□□ -0.17
UPF1-206ENST00000598471 SGTBQ96EQ0 304 aa14□□□□□ -0.17
UPF1-206ENST00000598471 PIGQQ9BRB3 760 aa14□□□□□ -0.17
UPF1-206ENST00000598471 ADI1Q9BV57 179 aa14□□□□□ -0.17
UPF1-206ENST00000598471 HES7Q9BYE0 225 aa14□□□□□ -0.17
UPF1-206ENST00000598471 TOR3AQ9H497 397 aa14□□□□□ -0.17
UPF1-206ENST00000598471 RIBC2Q9H4K1 309 aa14□□□□□ -0.17
UPF1-206ENST00000598471 CHRNA9Q9UGM1 479 aa14□□□□□ -0.17
UPF1-206ENST00000598471 MRPS18CQ9Y3D5 142 aaKnown RBP14□□□□□ -0.17
UPF1-206ENST00000598471 CHD8Q9HCK8 2581 aa13.99□□□□□ -0.17
UPF1-206ENST00000598471 HEATR5AQ86XA9 2040 aa13.99□□□□□ -0.17
UPF1-206ENST00000598471 IGKV1D-42A0A075B6H8 117 aa13.99□□□□□ -0.17
UPF1-206ENST00000598471 TRAV36DV7A0A075B6V5 113 aa13.99□□□□□ -0.17
UPF1-206ENST00000598471 TMEM72A0PK05 275 aa13.99□□□□□ -0.17
UPF1-206ENST00000598471 EFCAB9A8MZ26 197 aa13.99□□□□□ -0.17
UPF1-206ENST00000598471 ZNF208O43345 1280 aa13.99□□□□□ -0.17
UPF1-206ENST00000598471 MITFO75030 526 aaPredicted RBP13.99□□□□□ -0.17
UPF1-206ENST00000598471 AHSA1O95433 338 aa13.99□□□□□ -0.17
UPF1-206ENST00000598471 ITGB2P05107 769 aa13.99□□□□□ -0.17
UPF1-206ENST00000598471 SAGP10523 405 aaPredicted RBP13.99□□□□□ -0.17
UPF1-206ENST00000598471 OSMP13725 252 aa13.99□□□□□ -0.17
UPF1-206ENST00000598471 CAPGP40121 348 aa13.99□□□□□ -0.17
UPF1-206ENST00000598471 ESRRGP62508 458 aa13.99□□□□□ -0.17
UPF1-206ENST00000598471 CXADRP78310 365 aa13.99□□□□□ -0.17
UPF1-206ENST00000598471 FOXO1Q12778 655 aa13.99□□□□□ -0.17
UPF1-206ENST00000598471 TBR1Q16650 682 aa13.99□□□□□ -0.17
UPF1-206ENST00000598471 ZIK1Q3SY52 487 aaPredicted RBP13.99□□□□□ -0.17
UPF1-206ENST00000598471 TTC23Q5W5X9 447 aa13.99□□□□□ -0.17
UPF1-206ENST00000598471 C3orf33Q6P1S2 294 aa13.99□□□□□ -0.17
UPF1-206ENST00000598471 KLHL17Q6TDP4 642 aa13.99□□□□□ -0.17
UPF1-206ENST00000598471 TMPRSS11FQ6ZWK6 438 aa13.99□□□□□ -0.17
UPF1-206ENST00000598471 ADGRG3Q86Y34 549 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms