RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 MPGP29372 298 aa8.81□□□□□ -1
TRIM28-210ENST00000597618 NTF4P34130 210 aa8.81□□□□□ -1
TRIM28-210ENST00000597618 MAGEA8P43361 318 aa8.81□□□□□ -1
TRIM28-210ENST00000597618 KHKP50053 298 aa8.81□□□□□ -1
TRIM28-210ENST00000597618 FOXA1P55317 472 aa8.81□□□□□ -1
TRIM28-210ENST00000597618 SESN3P58005 492 aa8.81□□□□□ -1
TRIM28-210ENST00000597618 SKP2Q13309 424 aa8.81□□□□□ -1
TRIM28-210ENST00000597618 RIN1Q13671 783 aa8.81□□□□□ -1
TRIM28-210ENST00000597618 PDE7AQ13946 482 aa8.81□□□□□ -1
TRIM28-210ENST00000597618 CCNIQ14094 377 aa8.81□□□□□ -1
TRIM28-210ENST00000597618 ZNF385BQ569K4 471 aa8.81□□□□□ -1
TRIM28-210ENST00000597618 PEG10Q86TG7 708 aaKnown RBP8.81□□□□□ -1
TRIM28-210ENST00000597618 LCA5Q86VQ0 697 aa8.81□□□□□ -1
TRIM28-210ENST00000597618 ZNF786Q8N393 782 aa8.81□□□□□ -1
TRIM28-210ENST00000597618 TEX29Q8N6K0 151 aa8.81□□□□□ -1
TRIM28-210ENST00000597618 WDR60Q8WVS4 1066 aa8.81□□□□□ -1
TRIM28-210ENST00000597618 SLC38A2Q96QD8 506 aa8.81□□□□□ -1
TRIM28-210ENST00000597618 THUMPD3Q9BV44 507 aaKnown RBP8.81□□□□□ -1
TRIM28-210ENST00000597618 FUT8Q9BYC5 575 aa8.81□□□□□ -1
TRIM28-210ENST00000597618 ACTRT3Q9BYD9 372 aa8.81□□□□□ -1
TRIM28-210ENST00000597618 LAT2Q9GZY6 243 aa8.81□□□□□ -1
TRIM28-210ENST00000597618 SLC7A10Q9NS82 523 aa8.81□□□□□ -1
TRIM28-210ENST00000597618 NINJ2Q9NZG7 142 aa8.81□□□□□ -1
TRIM28-210ENST00000597618 SH3BP4Q9P0V3 963 aa8.81□□□□□ -1
TRIM28-210ENST00000597618 ZNF180Q9UJW8 692 aa8.81□□□□□ -1
TRIM28-210ENST00000597618 HDGFL3Q9Y3E1 203 aa8.81□□□□□ -1
TRIM28-210ENST00000597618 GRIP1Q9Y3R0 1128 aa8.81□□□□□ -1
TRIM28-210ENST00000597618 SPEF1Q9Y4P9 236 aa8.81□□□□□ -1
TRIM28-210ENST00000597618 HEATR1Q9H583 2144 aaKnown RBP8.81□□□□□ -1
TRIM28-210ENST00000597618 IGHV1-18A0A0C4DH31 117 aa8.8□□□□□ -1
TRIM28-210ENST00000597618 SERINC4A6NH21 518 aa8.8□□□□□ -1
TRIM28-210ENST00000597618 H3BQF6 201 aa8.8□□□□□ -1
TRIM28-210ENST00000597618 ANKRD28O15084 1053 aa8.8□□□□□ -1
TRIM28-210ENST00000597618 TMPRSS2O15393 492 aa8.8□□□□□ -1
TRIM28-210ENST00000597618 AKAP10O43572 662 aa8.8□□□□□ -1
TRIM28-210ENST00000597618 SEC22BO75396 215 aa8.8□□□□□ -1
TRIM28-210ENST00000597618 CRCPO75575 148 aa8.8□□□□□ -1
TRIM28-210ENST00000597618 CYP7B1O75881 506 aa8.8□□□□□ -1
TRIM28-210ENST00000597618 RGS9O75916 674 aaPredicted RBP8.8□□□□□ -1
TRIM28-210ENST00000597618 PRPH2P23942 346 aa8.8□□□□□ -1
TRIM28-210ENST00000597618 FKBP2P26885 142 aaKnown RBP8.8□□□□□ -1
TRIM28-210ENST00000597618 APOBEC1P41238 236 aaKnown RBP8.8□□□□□ -1
TRIM28-210ENST00000597618 ARFIP2P53365 341 aa8.8□□□□□ -1
TRIM28-210ENST00000597618 DEFA6Q01524 100 aa8.8□□□□□ -1
TRIM28-210ENST00000597618 C2orf54Q08AI8 447 aa8.8□□□□□ -1
TRIM28-210ENST00000597618 KIAA0040Q15053 153 aa8.8□□□□□ -1
TRIM28-210ENST00000597618 TRIP10Q15642 601 aa8.8□□□□□ -1
TRIM28-210ENST00000597618 HIKESHIQ53FT3 197 aa8.8□□□□□ -1
TRIM28-210ENST00000597618 AWAT1Q58HT5 328 aa8.8□□□□□ -1
TRIM28-210ENST00000597618 PDZK1Q5T2W1 519 aa8.8□□□□□ -1
TRIM28-210ENST00000597618 VHLLQ6RSH7 139 aa8.8□□□□□ -1
TRIM28-210ENST00000597618 SHISA2Q6UWI4 295 aa8.8□□□□□ -1
TRIM28-210ENST00000597618 OR56A1Q8NGH5 318 aa8.8□□□□□ -1
TRIM28-210ENST00000597618 ADAMTS15Q8TE58 950 aa8.8□□□□□ -1
TRIM28-210ENST00000597618 DCAKDQ8WVC6 231 aa8.8□□□□□ -1
TRIM28-210ENST00000597618 TMEM186Q96B77 213 aa8.8□□□□□ -1
TRIM28-210ENST00000597618 BOD1Q96IK1 185 aa8.8□□□□□ -1
TRIM28-210ENST00000597618 NMUR2Q9GZQ4 415 aa8.8□□□□□ -1
TRIM28-210ENST00000597618 GSTO2Q9H4Y5 243 aa8.8□□□□□ -1
TRIM28-210ENST00000597618 MOV10Q9HCE1 1003 aaKnown RBP8.8□□□□□ -1
TRIM28-210ENST00000597618 ACER3Q9NUN7 267 aa8.8□□□□□ -1
TRIM28-210ENST00000597618 HIF1ANQ9NWT6 349 aa8.8□□□□□ -1
TRIM28-210ENST00000597618 C1orf109Q9NX04 203 aa8.8□□□□□ -1
TRIM28-210ENST00000597618 TMEM216Q9P0N5 145 aa8.8□□□□□ -1
TRIM28-210ENST00000597618 CHRNA9Q9UGM1 479 aa8.8□□□□□ -1
TRIM28-210ENST00000597618 FAF1Q9UNN5 650 aaPredicted RBP8.8□□□□□ -1
TRIM28-210ENST00000597618 USP22Q9UPT9 525 aa8.8□□□□□ -1
TRIM28-210ENST00000597618 FLVCR1Q9Y5Y0 555 aa8.8□□□□□ -1
TRIM28-210ENST00000597618 VSTM5A8MXK1 200 aa8.79□□□□□ -1
TRIM28-210ENST00000597618 hCG_2039718K7EN88 272 aa8.79□□□□□ -1
TRIM28-210ENST00000597618 KLF11O14901 512 aa8.79□□□□□ -1
TRIM28-210ENST00000597618 GSTA1P08263 222 aa8.79□□□□□ -1
TRIM28-210ENST00000597618 SDC1P18827 310 aa8.79□□□□□ -1
TRIM28-210ENST00000597618 EPHA1P21709 976 aa8.79□□□□□ -1
TRIM28-210ENST00000597618 CLK1P49759 484 aaKnown RBP8.79□□□□□ -1
TRIM28-210ENST00000597618 TP53BP2Q13625 1128 aa8.79□□□□□ -1
TRIM28-210ENST00000597618 C3orf36Q3SXR2 165 aa8.79□□□□□ -1
TRIM28-210ENST00000597618 TSPO2Q5TGU0 170 aa8.79□□□□□ -1
TRIM28-210ENST00000597618 ABHD12BQ7Z5M8 362 aaPredicted RBP8.79□□□□□ -1
TRIM28-210ENST00000597618 CCDC103Q8IW40 242 aa8.79□□□□□ -1
TRIM28-210ENST00000597618 SVOPLQ8N434 492 aa8.79□□□□□ -1
TRIM28-210ENST00000597618 CCNYL1Q8N7R7 359 aa8.79□□□□□ -1
TRIM28-210ENST00000597618 POMGNT2Q8NAT1 580 aa8.79□□□□□ -1
TRIM28-210ENST00000597618 NUP37Q8NFH4 326 aa8.79□□□□□ -1
TRIM28-210ENST00000597618 OR4F15Q8NGB8 312 aa8.79□□□□□ -1
TRIM28-210ENST00000597618 UBASH3BQ8TF42 649 aa8.79□□□□□ -1
TRIM28-210ENST00000597618 MTERF3Q96E29 417 aa8.79□□□□□ -1
TRIM28-210ENST00000597618 ARL5BQ96KC2 179 aa8.79□□□□□ -1
TRIM28-210ENST00000597618 TSSK3Q96PN8 268 aa8.79□□□□□ -1
TRIM28-210ENST00000597618 ZNF747Q9BV97 191 aa8.79□□□□□ -1
TRIM28-210ENST00000597618 CCDC106Q9BWC9 280 aa8.79□□□□□ -1
TRIM28-210ENST00000597618 ZNF442Q9H7R0 627 aa8.79□□□□□ -1
TRIM28-210ENST00000597618 DYNLRB1Q9NP97 96 aa8.79□□□□□ -1
TRIM28-210ENST00000597618 SIRT3Q9NTG7 399 aaPredicted RBP8.79□□□□□ -1
TRIM28-210ENST00000597618 ZDHHC18Q9NUE0 388 aa8.79□□□□□ -1
TRIM28-210ENST00000597618 CCL27Q9Y4X3 112 aa8.79□□□□□ -1
TRIM28-210ENST00000597618 VWFP04275 2813 aa8.78□□□□□ -1
TRIM28-210ENST00000597618 SLC28A1O00337 649 aa8.78□□□□□ -1
TRIM28-210ENST00000597618 EIF1BO60739 113 aaKnown RBP8.78□□□□□ -1
TRIM28-210ENST00000597618 URI1O94763 535 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms