RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 C10orf107Q8IVU9 208 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 CCDC103Q8IW40 242 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 DDIASQ8IXT1 998 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 DEPDC4Q8N2C3 294 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 NATD1Q8N6N6 113 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 CCDC63Q8NA47 563 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 FAM71CQ8NEG0 241 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 C1orf162Q8NEQ5 155 aaPredicted RBP8.73□□□□□ -1.01
LIG1-209ENST00000596104 OR52E4Q8NGH9 312 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 OR5AK3PQ8NH89 298 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 PIGXQ8TBF5 258 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 MOAP1Q96BY2 351 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 ZNF350Q9GZX5 532 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 CHODLQ9H9P2 273 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 SLC17A5Q9NRA2 495 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 CTPS2Q9NRF8 586 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 HDGFL3Q9Y3E1 203 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 ATP23Q9Y6H3 246 aa8.73□□□□□ -1.01
LIG1-209ENST00000596104 LOC100289279A0A1B0GTE1 492 aa8.72□□□□□ -1.01
LIG1-209ENST00000596104 ATP6V1G2-DDX39BF2Z307 99 aa8.72□□□□□ -1.01
LIG1-209ENST00000596104 NDUFS8O00217 210 aa8.72□□□□□ -1.01
LIG1-209ENST00000596104 TRIM13O60858 407 aa8.72□□□□□ -1.01
LIG1-209ENST00000596104 PEX11AO75192 247 aa8.72□□□□□ -1.01
LIG1-209ENST00000596104 MRPL33O75394 65 aaKnown RBP8.72□□□□□ -1.01
LIG1-209ENST00000596104 STX11O75558 287 aa8.72□□□□□ -1.01
LIG1-209ENST00000596104 LYPLA1O75608 230 aaPredicted RBP8.72□□□□□ -1.01
LIG1-209ENST00000596104 AK1P00568 194 aa8.72□□□□□ -1.01
LIG1-209ENST00000596104 TFPIP10646 304 aa8.72□□□□□ -1.01
LIG1-209ENST00000596104 BMP4P12644 408 aa8.72□□□□□ -1.01
LIG1-209ENST00000596104 MAPK1P28482 360 aa8.72□□□□□ -1.01
LIG1-209ENST00000596104 PGM1P36871 562 aa8.72□□□□□ -1.01
LIG1-209ENST00000596104 APOBEC1P41238 236 aaKnown RBP8.72□□□□□ -1.01
LIG1-209ENST00000596104 PDLIM4P50479 330 aa8.72□□□□□ -1.01
LIG1-209ENST00000596104 PHC1P78364 1004 aa8.72□□□□□ -1.01
LIG1-209ENST00000596104 H3F3AP84243 136 aa8.72□□□□□ -1.01
LIG1-209ENST00000596104 GGTLC2Q14390 218 aa8.72□□□□□ -1.01
LIG1-209ENST00000596104 MAPK14Q16539 360 aa8.72□□□□□ -1.01
LIG1-209ENST00000596104 ARHGAP11BQ3KRB8 267 aa8.72□□□□□ -1.01
LIG1-209ENST00000596104 AP1ARQ63HQ0 302 aa8.72□□□□□ -1.01
LIG1-209ENST00000596104 RIMKLAQ8IXN7 391 aa8.72□□□□□ -1.01
LIG1-209ENST00000596104 C17orf78Q8N4C9 275 aa8.72□□□□□ -1.01
LIG1-209ENST00000596104 KRTCAP2Q8N6L1 136 aa8.72□□□□□ -1.01
LIG1-209ENST00000596104 MNS1Q8NEH6 495 aa8.72□□□□□ -1.01
LIG1-209ENST00000596104 ANP32BQ92688 251 aaKnown RBP8.72□□□□□ -1.01
LIG1-209ENST00000596104 ZHX1-C8orf76Q96EF9 292 aa8.72□□□□□ -1.01
LIG1-209ENST00000596104 DNAJA3Q96EY1 480 aa8.72□□□□□ -1.01
LIG1-209ENST00000596104 PPP3R2Q96LZ3 170 aa8.72□□□□□ -1.01
LIG1-209ENST00000596104 C3orf30Q96M34 536 aa8.72□□□□□ -1.01
LIG1-209ENST00000596104 C16orf45Q96MC5 204 aaPredicted RBP8.72□□□□□ -1.01
LIG1-209ENST00000596104 SORCS2Q96PQ0 1159 aa8.72□□□□□ -1.01
LIG1-209ENST00000596104 BHLHE41Q9C0J9 482 aaPredicted RBP8.72□□□□□ -1.01
LIG1-209ENST00000596104 OR11A1Q9GZK7 315 aa8.72□□□□□ -1.01
LIG1-209ENST00000596104 FKRPQ9H9S5 495 aa8.72□□□□□ -1.01
LIG1-209ENST00000596104 EML4Q9HC35 981 aaKnown RBP8.72□□□□□ -1.01
LIG1-209ENST00000596104 SLC7A10Q9NS82 523 aa8.72□□□□□ -1.01
LIG1-209ENST00000596104 ATAD3AQ9NVI7 634 aa8.72□□□□□ -1.01
LIG1-209ENST00000596104 CHRNA9Q9UGM1 479 aa8.72□□□□□ -1.01
LIG1-209ENST00000596104 DCTN4Q9UJW0 460 aa8.72□□□□□ -1.01
LIG1-209ENST00000596104 MKLN1Q9UL63 735 aa8.72□□□□□ -1.01
LIG1-209ENST00000596104 AMDHD2Q9Y303 409 aa8.72□□□□□ -1.01
LIG1-209ENST00000596104 SPIN1Q9Y657 262 aaPredicted RBP8.72□□□□□ -1.01
LIG1-209ENST00000596104 PMF1-BGLAPU3KQ54 211 aa8.72□□□□□ -1.01
LIG1-209ENST00000596104 DUXAA6NLW8 204 aa8.71□□□□□ -1.02
LIG1-209ENST00000596104 COPEO14579 308 aa8.71□□□□□ -1.02
LIG1-209ENST00000596104 ANKRD28O15084 1053 aa8.71□□□□□ -1.02
LIG1-209ENST00000596104 KIAA0513O60268 411 aa8.71□□□□□ -1.02
LIG1-209ENST00000596104 SHBGP04278 402 aa8.71□□□□□ -1.02
LIG1-209ENST00000596104 GUSBP08236 651 aa8.71□□□□□ -1.02
LIG1-209ENST00000596104 APEHP13798 732 aaKnown RBP8.71□□□□□ -1.02
LIG1-209ENST00000596104 PRPS1L1P21108 318 aa8.71□□□□□ -1.02
LIG1-209ENST00000596104 MATN1P21941 496 aa8.71□□□□□ -1.02
LIG1-209ENST00000596104 CLK1P49759 484 aaKnown RBP8.71□□□□□ -1.02
LIG1-209ENST00000596104 C6orf136Q5SQH8 315 aa8.71□□□□□ -1.02
LIG1-209ENST00000596104 C1QTNF12Q5T7M4 302 aa8.71□□□□□ -1.02
LIG1-209ENST00000596104 TSPO2Q5TGU0 170 aa8.71□□□□□ -1.02
LIG1-209ENST00000596104 C9orf135Q5VTT2 229 aa8.71□□□□□ -1.02
LIG1-209ENST00000596104 EMBQ6PCB8 327 aa8.71□□□□□ -1.02
LIG1-209ENST00000596104 BHLHB9Q6PI77 547 aa8.71□□□□□ -1.02
LIG1-209ENST00000596104 CASP12Q6UXS9 341 aa8.71□□□□□ -1.02
LIG1-209ENST00000596104 EIF3MQ7L2H7 374 aaKnown RBP8.71□□□□□ -1.02
LIG1-209ENST00000596104 GRINAQ7Z429 371 aa8.71□□□□□ -1.02
LIG1-209ENST00000596104 C6orf120Q7Z4R8 191 aa8.71□□□□□ -1.02
LIG1-209ENST00000596104 LSRQ86X29 649 aaPredicted RBP8.71□□□□□ -1.02
LIG1-209ENST00000596104 ADGRG3Q86Y34 549 aa8.71□□□□□ -1.02
LIG1-209ENST00000596104 HOMEZQ8IX15 550 aa8.71□□□□□ -1.02
LIG1-209ENST00000596104 CLEC4FQ8N1N0 589 aa8.71□□□□□ -1.02
LIG1-209ENST00000596104 OIT3Q8WWZ8 545 aa8.71□□□□□ -1.02
LIG1-209ENST00000596104 FBXO17Q96EF6 278 aa8.71□□□□□ -1.02
LIG1-209ENST00000596104 FOXN4Q96NZ1 517 aa8.71□□□□□ -1.02
LIG1-209ENST00000596104 PIMREGQ9BSJ6 248 aa8.71□□□□□ -1.02
LIG1-209ENST00000596104 C1orf50Q9BV19 199 aa8.71□□□□□ -1.02
LIG1-209ENST00000596104 MID2Q9UJV3 735 aa8.71□□□□□ -1.02
LIG1-209ENST00000596104 MOKQ9UQ07 419 aa8.71□□□□□ -1.02
LIG1-209ENST00000596104 FLVCR1Q9Y5Y0 555 aa8.71□□□□□ -1.02
LIG1-209ENST00000596104 FKBP7Q9Y680 259 aa8.71□□□□□ -1.02
LIG1-209ENST00000596104 RNF103-CHMP3A0A140T963 221 aa8.7□□□□□ -1.02
LIG1-209ENST00000596104 CFLARO15519 480 aa8.7□□□□□ -1.02
LIG1-209ENST00000596104 NPHS1O60500 1241 aa8.7□□□□□ -1.02
LIG1-209ENST00000596104 PGRP06401 933 aa8.7□□□□□ -1.02
LIG1-209ENST00000596104 IMPDH2P12268 514 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms