RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 PCED1AQ9H1Q7 454 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 EQTNQ9NQ60 294 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 ZSCAN32Q9NX65 697 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 P2RX2Q9UBL9 471 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 REV1Q9UBZ9 1251 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 FBXL2Q9UKC9 423 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 EDARQ9UNE0 448 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 TRABD2BA6NFA1 517 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 M0R129 80 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 HCRTR1O43613 425 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 SMIM6P0DI80 62 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 NR2F6P10588 404 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 LCN1P31025 176 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 BTCP35070 178 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 PRKAG1P54619 331 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 VSX2P58304 361 aaPredicted RBP14.23□□□□□ -0.13
PNKP-204ENST00000594661 CDC42P60953 191 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 DSG2Q14126 1118 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 ELOCQ15369 112 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 SYPL1Q16563 259 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 C5orf46Q6UWT4 87 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 RAB11FIP2Q7L804 512 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 SHFQ7M4L6 423 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 IQCHQ86VS3 1027 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 SHISA5Q8N114 240 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 DEFB123Q8N688 67 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 NANOGP1Q8N7R0 232 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 CAMKVQ8NCB2 501 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 APOBEC4Q8WW27 367 aaKnown RBP14.23□□□□□ -0.13
PNKP-204ENST00000594661 ZNF607Q96SK3 696 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 TREX2Q9BQ50 279 aaPredicted RBP14.23□□□□□ -0.13
PNKP-204ENST00000594661 ZNF251Q9BRH9 671 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 POLR2J2Q9GZM3 115 aaKnown RBP14.23□□□□□ -0.13
PNKP-204ENST00000594661 COMMD3Q9UBI1 195 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 CLEC2DQ9UHP7 191 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 GPN3Q9UHW5 284 aaPredicted RBP14.23□□□□□ -0.13
PNKP-204ENST00000594661 SLC6A14Q9UN76 642 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 ENTPD4Q9Y227 616 aa14.23□□□□□ -0.13
PNKP-204ENST00000594661 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.22□□□□□ -0.13
PNKP-204ENST00000594661 FFAR1O14842 300 aa14.22□□□□□ -0.13
PNKP-204ENST00000594661 APOC3P02656 99 aa14.22□□□□□ -0.13
PNKP-204ENST00000594661 NR2F1P10589 423 aa14.22□□□□□ -0.13
PNKP-204ENST00000594661 KCNJ5P48544 419 aa14.22□□□□□ -0.13
PNKP-204ENST00000594661 MAP4K2Q12851 820 aa14.22□□□□□ -0.13
PNKP-204ENST00000594661 RUNX2Q13950 521 aa14.22□□□□□ -0.13
PNKP-204ENST00000594661 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.22□□□□□ -0.13
PNKP-204ENST00000594661 FAM198BQ6UWH4 519 aa14.22□□□□□ -0.13
PNKP-204ENST00000594661 PRSS41Q7RTY9 318 aa14.22□□□□□ -0.13
PNKP-204ENST00000594661 TMEFF1Q8IYR6 380 aa14.22□□□□□ -0.13
PNKP-204ENST00000594661 PIAS4Q8N2W9 510 aaPredicted RBP14.22□□□□□ -0.13
PNKP-204ENST00000594661 ARL14Q8N4G2 192 aa14.22□□□□□ -0.13
PNKP-204ENST00000594661 AQP11Q8NBQ7 271 aa14.22□□□□□ -0.13
PNKP-204ENST00000594661 PROKR2Q8NFJ6 384 aa14.22□□□□□ -0.13
PNKP-204ENST00000594661 OR1M1Q8NGA1 313 aa14.22□□□□□ -0.13
PNKP-204ENST00000594661 C1orf216Q8TAB5 229 aa14.22□□□□□ -0.13
PNKP-204ENST00000594661 RERGQ96A58 199 aaPredicted RBP14.22□□□□□ -0.13
PNKP-204ENST00000594661 MRPS24Q96EL2 167 aaKnown RBP14.22□□□□□ -0.13
PNKP-204ENST00000594661 ZNF681Q96N22 645 aa14.22□□□□□ -0.13
PNKP-204ENST00000594661 SLC38A3Q99624 504 aa14.22□□□□□ -0.13
PNKP-204ENST00000594661 RSPO3Q9BXY4 272 aaPredicted RBP14.22□□□□□ -0.13
PNKP-204ENST00000594661 SEC14L3Q9UDX4 400 aa14.22□□□□□ -0.13
PNKP-204ENST00000594661 EML5Q05BV3 1969 aa14.22□□□□□ -0.13
PNKP-204ENST00000594661 CEP192Q8TEP8 1941 aa14.22□□□□□ -0.13
PNKP-204ENST00000594661 PRAMEF27A3QJZ7 478 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 PMS2P1A4D2B8 440 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 ZNF860A6NHJ4 632 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 K7ESF4 209 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 SNAPC5O75971 98 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 SELLP14151 372 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 ST6GAL1P15907 406 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 SMSP52788 366 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 TNFRSF17Q02223 184 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 DMWDQ09019 674 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 NCF4Q15080 339 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 ZNF528Q3MIS6 628 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 LIPKQ5VXJ0 399 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 SERINC2Q96SA4 455 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 GAREM1Q9H706 876 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 FAM60AQ9NP50 221 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 SEMA3GQ9NS98 782 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 KCND3Q9UK17 655 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 SLC6A5Q9Y345 797 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 NUBP2Q9Y5Y2 271 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 TMEM82A0PJX8 343 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 FAM227AF5H4B4 570 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 CTSBP07858 339 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 CPEP16870 476 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 CSNK2A2P19784 350 aaPredicted RBP14.21□□□□□ -0.13
PNKP-204ENST00000594661 PPP2R1BP30154 601 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 KHKP50053 298 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 CEBPEQ15744 281 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 DEFB110Q30KQ9 67 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 ARMC6Q6NXE6 501 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 DEF8Q6ZN54 512 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 FGD2Q7Z6J4 655 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 ZER1Q7Z7L7 766 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 GKN2Q86XP6 184 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 OR9A2Q8NGT5 310 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 OR52P1PQ8NH57 321 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 SCARB1Q8WTV0 552 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms