RNA–Protein interactions for RNA: ENST00000594552.5

CAPN12-204, Transcript of calpain 12, human

TSL 2

Gene CAPN12, Length 1,046 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN12-204	ENST00000594552	MSRB3	Q8IXL7	192 aa		11.63	□□□□□ -0.55
CAPN12-204	ENST00000594552	SLC38A5	Q8WUX1	472 aa		11.63	□□□□□ -0.55
CAPN12-204	ENST00000594552	C10orf82	Q8WW14	230 aa		11.63	□□□□□ -0.55
CAPN12-204	ENST00000594552	CPNE4	Q96A23	557 aa	Predicted RBP	11.63	□□□□□ -0.55
CAPN12-204	ENST00000594552	PERP	Q96FX8	193 aa		11.63	□□□□□ -0.55
CAPN12-204	ENST00000594552	MRGPRX4	Q96LA9	322 aa		11.63	□□□□□ -0.55
CAPN12-204	ENST00000594552	TACO1	Q9BSH4	297 aa	Known RBP	11.63	□□□□□ -0.55
CAPN12-204	ENST00000594552	NSRP1	Q9H0G5	558 aa	Known RBP	11.63	□□□□□ -0.55
CAPN12-204	ENST00000594552	MTHFD2L	Q9H903	347 aa	Predicted RBP	11.63	□□□□□ -0.55
CAPN12-204	ENST00000594552	SAR1A	Q9NR31	198 aa		11.63	□□□□□ -0.55
CAPN12-204	ENST00000594552	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	11.63	□□□□□ -0.55
CAPN12-204	ENST00000594552	VAPA	Q9P0L0	249 aa		11.63	□□□□□ -0.55
CAPN12-204	ENST00000594552	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	11.63	□□□□□ -0.55
CAPN12-204	ENST00000594552	MTOR	P42345	2549 aa		11.62	□□□□□ -0.55
CAPN12-204	ENST00000594552	HRNR	Q86YZ3	2850 aa	Predicted RBP	11.62	□□□□□ -0.55
CAPN12-204	ENST00000594552	BBIP1	A8MTZ0	92 aa		11.62	□□□□□ -0.55
CAPN12-204	ENST00000594552	DEFB108A	A8MXU0	73 aa		11.62	□□□□□ -0.55
CAPN12-204	ENST00000594552	EVPLL	A8MZ36	301 aa		11.62	□□□□□ -0.55
CAPN12-204	ENST00000594552	ETV2	O00321	342 aa	Predicted RBP	11.62	□□□□□ -0.55
CAPN12-204	ENST00000594552	NTN1	O95631	604 aa		11.62	□□□□□ -0.55
CAPN12-204	ENST00000594552	CGA	P01215	116 aa		11.62	□□□□□ -0.55
CAPN12-204	ENST00000594552	THBS1	P07996	1170 aa		11.62	□□□□□ -0.55
CAPN12-204	ENST00000594552	INHBB	P09529	407 aa		11.62	□□□□□ -0.55
CAPN12-204	ENST00000594552	NID1	P14543	1247 aa		11.62	□□□□□ -0.55
CAPN12-204	ENST00000594552	PRKCA	P17252	672 aa		11.62	□□□□□ -0.55
CAPN12-204	ENST00000594552	RNF144A	P50876	292 aa	Predicted RBP	11.62	□□□□□ -0.55
CAPN12-204	ENST00000594552	CARD18	P57730	90 aa		11.62	□□□□□ -0.55
CAPN12-204	ENST00000594552	KCNJ10	P78508	379 aa		11.62	□□□□□ -0.55
CAPN12-204	ENST00000594552	MAPK11	Q15759	364 aa		11.62	□□□□□ -0.55
CAPN12-204	ENST00000594552	ACKR1	Q16570	336 aa		11.62	□□□□□ -0.55
CAPN12-204	ENST00000594552	ZSWIM7	Q19AV6	140 aa		11.62	□□□□□ -0.55
CAPN12-204	ENST00000594552	LIN52	Q52LA3	116 aa		11.62	□□□□□ -0.55
CAPN12-204	ENST00000594552	SLC25A53	Q5H9E4	307 aa		11.62	□□□□□ -0.55
CAPN12-204	ENST00000594552	GCNT6	Q5T4J0	391 aa		11.62	□□□□□ -0.55
CAPN12-204	ENST00000594552	DLEU7	Q6UYE1	221 aa		11.62	□□□□□ -0.55
CAPN12-204	ENST00000594552	WFDC8	Q8IUA0	241 aa		11.62	□□□□□ -0.55
CAPN12-204	ENST00000594552	LILRA2	Q8N149	483 aa		11.62	□□□□□ -0.55
CAPN12-204	ENST00000594552	ATP6V1C2	Q8NEY4	427 aa		11.62	□□□□□ -0.55
CAPN12-204	ENST00000594552	GPR119	Q8TDV5	335 aa		11.62	□□□□□ -0.55
CAPN12-204	ENST00000594552	WDR60	Q8WVS4	1066 aa		11.62	□□□□□ -0.55
CAPN12-204	ENST00000594552	TMEM234	Q8WY98	164 aa		11.62	□□□□□ -0.55
CAPN12-204	ENST00000594552	ST8SIA1	Q92185	356 aa		11.62	□□□□□ -0.55
CAPN12-204	ENST00000594552	PIP5K1A	Q99755	562 aa		11.62	□□□□□ -0.55
CAPN12-204	ENST00000594552	CPPED1	Q9BRF8	314 aa	Predicted RBP	11.62	□□□□□ -0.55
CAPN12-204	ENST00000594552	QRSL1	Q9H0R6	528 aa	Known RBP	11.62	□□□□□ -0.55
CAPN12-204	ENST00000594552	GSX1	Q9H4S2	264 aa	Predicted RBP	11.62	□□□□□ -0.55
CAPN12-204	ENST00000594552	BCL2L10	Q9HD36	194 aa		11.62	□□□□□ -0.55
CAPN12-204	ENST00000594552	SLAMF8	Q9P0V8	285 aa		11.62	□□□□□ -0.55
CAPN12-204	ENST00000594552	CAPN7	Q9Y6W3	813 aa		11.62	□□□□□ -0.55
CAPN12-204	ENST00000594552		A0A0G2JPF8	293 aa		11.61	□□□□□ -0.55
CAPN12-204	ENST00000594552		A0A1W2PPR1	153 aa		11.61	□□□□□ -0.55
CAPN12-204	ENST00000594552	HNRNPCL2	B2RXH8	293 aa		11.61	□□□□□ -0.55
CAPN12-204	ENST00000594552	HNRNPCL3	B7ZW38	293 aa		11.61	□□□□□ -0.55
CAPN12-204	ENST00000594552	HNRNPCL1	O60812	293 aa	Known RBP	11.61	□□□□□ -0.55
CAPN12-204	ENST00000594552	CYP7B1	O75881	506 aa		11.61	□□□□□ -0.55
CAPN12-204	ENST00000594552	HNRNPCL4	P0DMR1	293 aa		11.61	□□□□□ -0.55
CAPN12-204	ENST00000594552	UQCRB	P14927	111 aa		11.61	□□□□□ -0.55
CAPN12-204	ENST00000594552	IL7R	P16871	459 aa		11.61	□□□□□ -0.55
CAPN12-204	ENST00000594552	GPX2	P18283	190 aa		11.61	□□□□□ -0.55
CAPN12-204	ENST00000594552	PGC	P20142	388 aa		11.61	□□□□□ -0.55
CAPN12-204	ENST00000594552	IL32	P24001	234 aa		11.61	□□□□□ -0.55
CAPN12-204	ENST00000594552	AGTR1	P30556	359 aa		11.61	□□□□□ -0.55
CAPN12-204	ENST00000594552	HOXC12	P31275	282 aa		11.61	□□□□□ -0.55
CAPN12-204	ENST00000594552	SELENBP1	Q13228	472 aa		11.61	□□□□□ -0.55
CAPN12-204	ENST00000594552	NFYC	Q13952	458 aa		11.61	□□□□□ -0.55
CAPN12-204	ENST00000594552	LARS2	Q15031	903 aa	Known RBP	11.61	□□□□□ -0.55
CAPN12-204	ENST00000594552	QPRT	Q15274	297 aa		11.61	□□□□□ -0.55
CAPN12-204	ENST00000594552	RNPS1	Q15287	305 aa	Known RBP	11.61	□□□□□ -0.55
CAPN12-204	ENST00000594552	GUSBP1	Q15486	140 aa		11.61	□□□□□ -0.55
CAPN12-204	ENST00000594552	ZNF239	Q16600	458 aa	Known RBP	11.61	□□□□□ -0.55
CAPN12-204	ENST00000594552	TRMT5	Q32P41	509 aa	Known RBP	11.61	□□□□□ -0.55
CAPN12-204	ENST00000594552	KRTAP21-3	Q3LHN1	58 aa		11.61	□□□□□ -0.55
CAPN12-204	ENST00000594552	RNF220	Q5VTB9	566 aa		11.61	□□□□□ -0.55
CAPN12-204	ENST00000594552	CLEC9A	Q6UXN8	241 aa		11.61	□□□□□ -0.55
CAPN12-204	ENST00000594552	LIAT1	Q6ZQX7	453 aa		11.61	□□□□□ -0.55
CAPN12-204	ENST00000594552	ZNF440	Q8IYI8	595 aa		11.61	□□□□□ -0.55
CAPN12-204	ENST00000594552	LRRC75A-AS1	Q8N1F1	130 aa		11.61	□□□□□ -0.55
CAPN12-204	ENST00000594552	BBS10	Q8TAM1	723 aa		11.61	□□□□□ -0.55
CAPN12-204	ENST00000594552	POC1B	Q8TC44	478 aa		11.61	□□□□□ -0.55
CAPN12-204	ENST00000594552	OSTF1	Q92882	214 aa		11.61	□□□□□ -0.55
CAPN12-204	ENST00000594552	ZG16B	Q96DA0	208 aa		11.61	□□□□□ -0.55
CAPN12-204	ENST00000594552	TMEM19	Q96HH6	336 aa		11.61	□□□□□ -0.55
CAPN12-204	ENST00000594552	KLHDC3	Q9BQ90	382 aa		11.61	□□□□□ -0.55
CAPN12-204	ENST00000594552	ACTR6	Q9GZN1	396 aa		11.61	□□□□□ -0.55
CAPN12-204	ENST00000594552	IKZF5	Q9H5V7	419 aa		11.61	□□□□□ -0.55
CAPN12-204	ENST00000594552	TMEM38A	Q9H6F2	299 aa		11.61	□□□□□ -0.55
CAPN12-204	ENST00000594552	DLL4	Q9NR61	685 aa		11.61	□□□□□ -0.55
CAPN12-204	ENST00000594552	PLSCR4	Q9NRQ2	329 aa		11.61	□□□□□ -0.55
CAPN12-204	ENST00000594552		A0A0J9YW62	118 aa		11.6	□□□□□ -0.55
CAPN12-204	ENST00000594552	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	11.6	□□□□□ -0.55
CAPN12-204	ENST00000594552	C5orf58	C9J3I9	102 aa		11.6	□□□□□ -0.55
CAPN12-204	ENST00000594552	FAAH	O00519	579 aa		11.6	□□□□□ -0.55
CAPN12-204	ENST00000594552	ADAMDEC1	O15204	470 aa		11.6	□□□□□ -0.55
CAPN12-204	ENST00000594552	SIAH2	O43255	324 aa		11.6	□□□□□ -0.55
CAPN12-204	ENST00000594552	ARAF	P10398	606 aa		11.6	□□□□□ -0.55
CAPN12-204	ENST00000594552	ETS2	P15036	469 aa		11.6	□□□□□ -0.55
CAPN12-204	ENST00000594552	LSP1	P33241	339 aa		11.6	□□□□□ -0.55
CAPN12-204	ENST00000594552	KLF10	Q13118	480 aa		11.6	□□□□□ -0.55
CAPN12-204	ENST00000594552	CTU2	Q2VPK5	515 aa	Known RBP	11.6	□□□□□ -0.55
CAPN12-204	ENST00000594552	MRPL2	Q5T653	305 aa	Known RBP	11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms