RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 TMCO5AQ8N6Q1 288 aa17.8■□□□□ 0.44
LSM4-203ENST00000593829 OR2M3Q8NG83 312 aa17.8■□□□□ 0.44
LSM4-203ENST00000593829 TAMM41Q96BW9 452 aa17.8■□□□□ 0.44
LSM4-203ENST00000593829 ZNF583Q96ND8 569 aa17.8■□□□□ 0.44
LSM4-203ENST00000593829 AMBRA1Q9C0C7 1298 aa17.8■□□□□ 0.44
LSM4-203ENST00000593829 MAGIXQ9H6Y5 334 aa17.8■□□□□ 0.44
LSM4-203ENST00000593829 PTGES2Q9H7Z7 377 aa17.8■□□□□ 0.44
LSM4-203ENST00000593829 THUMPD1Q9NXG2 353 aaKnown RBP17.8■□□□□ 0.44
LSM4-203ENST00000593829 DKKL1Q9UK85 242 aa17.8■□□□□ 0.44
LSM4-203ENST00000593829 BAG5Q9UL15 447 aa17.8■□□□□ 0.44
LSM4-203ENST00000593829 TENM4Q6N022 2769 aa17.8■□□□□ 0.44
LSM4-203ENST00000593829 POLEQ07864 2286 aa17.8■□□□□ 0.44
LSM4-203ENST00000593829 NCKAP5O14513 1909 aa17.8■□□□□ 0.44
LSM4-203ENST00000593829 TRGV8A0A0C4DH27 118 aa17.8■□□□□ 0.44
LSM4-203ENST00000593829 PRAMEF27A3QJZ7 478 aa17.8■□□□□ 0.44
LSM4-203ENST00000593829 B4DXG7 233 aa17.8■□□□□ 0.44
LSM4-203ENST00000593829 M0QX08 132 aa17.8■□□□□ 0.44
LSM4-203ENST00000593829 PRRG2O14669 202 aa17.8■□□□□ 0.44
LSM4-203ENST00000593829 SLC22A1O15245 554 aa17.8■□□□□ 0.44
LSM4-203ENST00000593829 SLC16A6O15403 523 aa17.8■□□□□ 0.44
LSM4-203ENST00000593829 IL7RP16871 459 aa17.8■□□□□ 0.44
LSM4-203ENST00000593829 ACVR2AP27037 513 aa17.8■□□□□ 0.44
LSM4-203ENST00000593829 SRD5A2P31213 254 aa17.8■□□□□ 0.44
LSM4-203ENST00000593829 FADDQ13158 208 aa17.8■□□□□ 0.44
LSM4-203ENST00000593829 RGNQ15493 299 aa17.8■□□□□ 0.44
LSM4-203ENST00000593829 SYPL1Q16563 259 aa17.8■□□□□ 0.44
LSM4-203ENST00000593829 TYW3Q6IPR3 259 aaKnown RBP17.8■□□□□ 0.44
LSM4-203ENST00000593829 LAIR2Q6ISS4 152 aa17.8■□□□□ 0.44
LSM4-203ENST00000593829 OLIG3Q7RTU3 272 aa17.8■□□□□ 0.44
LSM4-203ENST00000593829 YRDCQ86U90 279 aaKnown RBP17.8■□□□□ 0.44
LSM4-203ENST00000593829 GATSQ8NAP1 163 aa17.8■□□□□ 0.44
LSM4-203ENST00000593829 FAM57AQ8TBR7 257 aa17.8■□□□□ 0.44
LSM4-203ENST00000593829 OR2B2Q9GZK3 357 aa17.8■□□□□ 0.44
LSM4-203ENST00000593829 SAP130Q9H0E3 1048 aa17.8■□□□□ 0.44
LSM4-203ENST00000593829 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.8■□□□□ 0.44
LSM4-203ENST00000593829 DAPK2Q9UIK4 370 aa17.8■□□□□ 0.44
LSM4-203ENST00000593829 MRPS18CQ9Y3D5 142 aaKnown RBP17.8■□□□□ 0.44
LSM4-203ENST00000593829 TRBV5-3A0A0A0MS03 114 aa17.79■□□□□ 0.44
LSM4-203ENST00000593829 NPIPA2E9PIF3 369 aa17.79■□□□□ 0.44
LSM4-203ENST00000593829 NPIPA3F8WFD2 350 aa17.79■□□□□ 0.44
LSM4-203ENST00000593829 KIAA0513O60268 411 aa17.79■□□□□ 0.44
LSM4-203ENST00000593829 ZIC2O95409 532 aaPredicted RBP17.79■□□□□ 0.44
LSM4-203ENST00000593829 NR2F1P10589 423 aa17.79■□□□□ 0.44
LSM4-203ENST00000593829 DPP4P27487 766 aa17.79■□□□□ 0.44
LSM4-203ENST00000593829 DSCR4P56555 118 aaPredicted RBP17.79■□□□□ 0.44
LSM4-203ENST00000593829 DSTNP60981 165 aa17.79■□□□□ 0.44
LSM4-203ENST00000593829 ISL1P61371 349 aa17.79■□□□□ 0.44
LSM4-203ENST00000593829 CD47Q08722 323 aa17.79■□□□□ 0.44
LSM4-203ENST00000593829 ZNF141Q15928 474 aa17.79■□□□□ 0.44
LSM4-203ENST00000593829 BCL2A1Q16548 175 aa17.79■□□□□ 0.44
LSM4-203ENST00000593829 C4orf17Q53FE4 359 aa17.79■□□□□ 0.44
LSM4-203ENST00000593829 EIPR1Q53HC9 387 aa17.79■□□□□ 0.44
LSM4-203ENST00000593829 WIPI1Q5MNZ9 446 aaPredicted RBP17.79■□□□□ 0.44
LSM4-203ENST00000593829 ZNF691Q5VV52 312 aa17.79■□□□□ 0.44
LSM4-203ENST00000593829 C1QL3Q5VWW1 255 aa17.79■□□□□ 0.44
LSM4-203ENST00000593829 FRRS1Q6ZNA5 592 aa17.79■□□□□ 0.44
LSM4-203ENST00000593829 OR14L1PQ8NHC6 308 aa17.79■□□□□ 0.44
LSM4-203ENST00000593829 SARAFQ96BY9 339 aa17.79■□□□□ 0.44
LSM4-203ENST00000593829 ARMC7Q9H6L4 198 aa17.79■□□□□ 0.44
LSM4-203ENST00000593829 TAS2R10Q9NYW0 307 aa17.79■□□□□ 0.44
LSM4-203ENST00000593829 P2RX2Q9UBL9 471 aa17.79■□□□□ 0.44
LSM4-203ENST00000593829 A0A1B0GUH1 482 aa17.78■□□□□ 0.44
LSM4-203ENST00000593829 ZNF99A8MXY4 864 aaPredicted RBP17.78■□□□□ 0.44
LSM4-203ENST00000593829 BCKDKO14874 412 aa17.78■□□□□ 0.44
LSM4-203ENST00000593829 TPOP07202 933 aa17.78■□□□□ 0.44
LSM4-203ENST00000593829 ENDOUP21128 410 aaKnown RBP17.78■□□□□ 0.44
LSM4-203ENST00000593829 MSX1P28360 303 aa17.78■□□□□ 0.44
LSM4-203ENST00000593829 CA7P43166 264 aa17.78■□□□□ 0.44
LSM4-203ENST00000593829 GP2P55259 537 aaKnown RBP17.78■□□□□ 0.44
LSM4-203ENST00000593829 SELPLGQ14242 412 aa17.78■□□□□ 0.44
LSM4-203ENST00000593829 GANABQ14697 944 aaKnown RBP17.78■□□□□ 0.44
LSM4-203ENST00000593829 CD226Q15762 336 aa17.78■□□□□ 0.44
LSM4-203ENST00000593829 C3AR1Q16581 482 aa17.78■□□□□ 0.44
LSM4-203ENST00000593829 CTU2Q2VPK5 515 aaKnown RBP17.78■□□□□ 0.44
LSM4-203ENST00000593829 PDZK1Q5T2W1 519 aa17.78■□□□□ 0.44
LSM4-203ENST00000593829 ZNF619Q8N2I2 560 aa17.78■□□□□ 0.44
LSM4-203ENST00000593829 ZNF614Q8N883 585 aa17.78■□□□□ 0.44
LSM4-203ENST00000593829 OR5K1Q8NHB7 308 aa17.78■□□□□ 0.44
LSM4-203ENST00000593829 PHOSPHO1Q8TCT1 267 aa17.78■□□□□ 0.44
LSM4-203ENST00000593829 RELTQ969Z4 430 aa17.78■□□□□ 0.44
LSM4-203ENST00000593829 TMEM165Q9HC07 324 aa17.78■□□□□ 0.44
LSM4-203ENST00000593829 SPRR3Q9UBC9 169 aa17.78■□□□□ 0.44
LSM4-203ENST00000593829 WARS2Q9UGM6 360 aaKnown RBP17.78■□□□□ 0.44
LSM4-203ENST00000593829 ACAD8Q9UKU7 415 aa17.78■□□□□ 0.44
LSM4-203ENST00000593829 CORO2BQ9UQ03 480 aa17.78■□□□□ 0.44
LSM4-203ENST00000593829 SLC5A6Q9Y289 635 aa17.78■□□□□ 0.44
LSM4-203ENST00000593829 FAM32AQ9Y421 112 aaKnown RBP17.78■□□□□ 0.44
LSM4-203ENST00000593829 HTR3EA5X5Y0 456 aa17.78■□□□□ 0.44
LSM4-203ENST00000593829 TMEM247A6NEH6 219 aa17.78■□□□□ 0.44
LSM4-203ENST00000593829 SLC1A7O00341 560 aa17.78■□□□□ 0.44
LSM4-203ENST00000593829 LRRTM2O43300 516 aa17.78■□□□□ 0.44
LSM4-203ENST00000593829 MRPS14O60783 128 aaKnown RBP17.78■□□□□ 0.44
LSM4-203ENST00000593829 UGT2B17O75795 530 aa17.78■□□□□ 0.44
LSM4-203ENST00000593829 FAM26EQ8N5C1 309 aa17.78■□□□□ 0.44
LSM4-203ENST00000593829 OIT3Q8WWZ8 545 aa17.78■□□□□ 0.44
LSM4-203ENST00000593829 TNFRSF10DQ9UBN6 386 aa17.78■□□□□ 0.44
LSM4-203ENST00000593829 KCNE5Q9UJ90 142 aa17.78■□□□□ 0.44
LSM4-203ENST00000593829 SH3BGRL2Q9UJC5 107 aa17.78■□□□□ 0.44
LSM4-203ENST00000593829 TINAGQ9UJW2 476 aa17.78■□□□□ 0.44
LSM4-203ENST00000593829 SLC6A5Q9Y345 797 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms