RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 OR11A1Q9GZK7 315 aa17.92■□□□□ 0.46
CIRBP-239ENST00000592467 OR10A4Q9H209 315 aa17.92■□□□□ 0.46
CIRBP-239ENST00000592467 OSGIN1Q9UJX0 560 aa17.92■□□□□ 0.46
CIRBP-239ENST00000592467 GMEB1Q9Y692 573 aa17.92■□□□□ 0.46
CIRBP-239ENST00000592467 CLIC1O00299 241 aa17.91■□□□□ 0.46
CIRBP-239ENST00000592467 PMS2P2O95744 297 aa17.91■□□□□ 0.46
CIRBP-239ENST00000592467 FESP07332 822 aa17.91■□□□□ 0.46
CIRBP-239ENST00000592467 IL7RP16871 459 aa17.91■□□□□ 0.46
CIRBP-239ENST00000592467 ATP4BP51164 291 aa17.91■□□□□ 0.46
CIRBP-239ENST00000592467 STX1BP61266 288 aa17.91■□□□□ 0.46
CIRBP-239ENST00000592467 CXorf67Q86X51 503 aaPredicted RBP17.91■□□□□ 0.46
CIRBP-239ENST00000592467 PEX5LQ8IYB4 626 aa17.91■□□□□ 0.46
CIRBP-239ENST00000592467 OR52P1PQ8NH57 321 aa17.91■□□□□ 0.46
CIRBP-239ENST00000592467 PIK3IP1Q96FE7 263 aa17.91■□□□□ 0.46
CIRBP-239ENST00000592467 ZC3HAV1LQ96H79 300 aaKnown RBP17.91■□□□□ 0.46
CIRBP-239ENST00000592467 ALPK1Q96QP1 1244 aa17.91■□□□□ 0.46
CIRBP-239ENST00000592467 ADAM19Q9H013 955 aa17.91■□□□□ 0.46
CIRBP-239ENST00000592467 ZNF385DQ9H6B1 395 aa17.91■□□□□ 0.46
CIRBP-239ENST00000592467 CCDC167Q9P0B6 97 aa17.91■□□□□ 0.46
CIRBP-239ENST00000592467 KLHL9Q9P2J3 617 aa17.91■□□□□ 0.46
CIRBP-239ENST00000592467 GPR52Q9Y2T5 361 aa17.91■□□□□ 0.46
CIRBP-239ENST00000592467 IGKV3D-15A0A087WSY6 115 aa17.9■□□□□ 0.46
CIRBP-239ENST00000592467 TMED7-TICAM2A0A0A6YYA0 188 aa17.9■□□□□ 0.46
CIRBP-239ENST00000592467 TMEM72A0PK05 275 aa17.9■□□□□ 0.46
CIRBP-239ENST00000592467 ZNF716A6NP11 495 aa17.9■□□□□ 0.46
CIRBP-239ENST00000592467 ZNF724A8MTY0 619 aa17.9■□□□□ 0.46
CIRBP-239ENST00000592467 SULT2B1O00204 365 aa17.9■□□□□ 0.46
CIRBP-239ENST00000592467 PPP3CBP16298 524 aa17.9■□□□□ 0.46
CIRBP-239ENST00000592467 SLC1A3P43003 542 aa17.9■□□□□ 0.46
CIRBP-239ENST00000592467 CLK1P49759 484 aaKnown RBP17.9■□□□□ 0.46
CIRBP-239ENST00000592467 CRISP3P54108 245 aa17.9■□□□□ 0.46
CIRBP-239ENST00000592467 RASGEF1BQ0VAM2 473 aa17.9■□□□□ 0.46
CIRBP-239ENST00000592467 RNF220Q5VTB9 566 aa17.9■□□□□ 0.46
CIRBP-239ENST00000592467 MTDHQ86UE4 582 aaKnown RBP17.9■□□□□ 0.46
CIRBP-239ENST00000592467 STK32CQ86UX6 486 aa17.9■□□□□ 0.46
CIRBP-239ENST00000592467 CLIP4Q8N3C7 705 aa17.9■□□□□ 0.46
CIRBP-239ENST00000592467 DYDC1Q8WWB3 177 aa17.9■□□□□ 0.46
CIRBP-239ENST00000592467 SPDL1Q96EA4 605 aa17.9■□□□□ 0.46
CIRBP-239ENST00000592467 TACO1Q9BSH4 297 aaKnown RBP17.9■□□□□ 0.46
CIRBP-239ENST00000592467 ACTR6Q9GZN1 396 aa17.9■□□□□ 0.46
CIRBP-239ENST00000592467 BCL2L10Q9HD36 194 aa17.9■□□□□ 0.46
CIRBP-239ENST00000592467 A4GALTQ9NPC4 353 aa17.9■□□□□ 0.46
CIRBP-239ENST00000592467 ARGLU1Q9NWB6 273 aaPredicted RBP17.9■□□□□ 0.46
CIRBP-239ENST00000592467 TMEM45AQ9NWC5 275 aa17.9■□□□□ 0.46
CIRBP-239ENST00000592467 CALML5Q9NZT1 146 aa17.9■□□□□ 0.46
CIRBP-239ENST00000592467 VAPAQ9P0L0 249 aa17.9■□□□□ 0.46
CIRBP-239ENST00000592467 ZNF443Q9Y2A4 671 aaPredicted RBP17.9■□□□□ 0.46
CIRBP-239ENST00000592467 TMED7Q9Y3B3 224 aa17.9■□□□□ 0.46
CIRBP-239ENST00000592467 HDGFL3Q9Y3E1 203 aa17.9■□□□□ 0.46
CIRBP-239ENST00000592467 A0A0G2JPF8 293 aa17.89■□□□□ 0.45
CIRBP-239ENST00000592467 CFAP73A6NFT4 308 aa17.89■□□□□ 0.45
CIRBP-239ENST00000592467 HNRNPCL2B2RXH8 293 aa17.89■□□□□ 0.45
CIRBP-239ENST00000592467 HNRNPCL3B7ZW38 293 aa17.89■□□□□ 0.45
CIRBP-239ENST00000592467 ZNF208O43345 1280 aa17.89■□□□□ 0.45
CIRBP-239ENST00000592467 HNRNPCL1O60812 293 aaKnown RBP17.89■□□□□ 0.45
CIRBP-239ENST00000592467 RAMP1O60894 148 aa17.89■□□□□ 0.45
CIRBP-239ENST00000592467 THBS1P07996 1170 aa17.89■□□□□ 0.45
CIRBP-239ENST00000592467 GKN3PP0CG01 181 aa17.89■□□□□ 0.45
CIRBP-239ENST00000592467 HNRNPCL4P0DMR1 293 aa17.89■□□□□ 0.45
CIRBP-239ENST00000592467 IMPDH2P12268 514 aa17.89■□□□□ 0.45
CIRBP-239ENST00000592467 FKBP2P26885 142 aaKnown RBP17.89■□□□□ 0.45
CIRBP-239ENST00000592467 TACR3P29371 465 aa17.89■□□□□ 0.45
CIRBP-239ENST00000592467 NTF4P34130 210 aa17.89■□□□□ 0.45
CIRBP-239ENST00000592467 HTR3AP46098 478 aa17.89■□□□□ 0.45
CIRBP-239ENST00000592467 OR3A2P47893 321 aa17.89■□□□□ 0.45
CIRBP-239ENST00000592467 CSNK2A1P68400 391 aaPredicted RBP17.89■□□□□ 0.45
CIRBP-239ENST00000592467 H3F3AP84243 136 aa17.89■□□□□ 0.45
CIRBP-239ENST00000592467 PDK3Q15120 406 aa17.89■□□□□ 0.45
CIRBP-239ENST00000592467 TSC22D1Q15714 1073 aa17.89■□□□□ 0.45
CIRBP-239ENST00000592467 DEFB113Q30KQ7 82 aa17.89■□□□□ 0.45
CIRBP-239ENST00000592467 LIN52Q52LA3 116 aa17.89■□□□□ 0.45
CIRBP-239ENST00000592467 MAL2Q969L2 176 aa17.89■□□□□ 0.45
CIRBP-239ENST00000592467 ZNF775Q96BV0 537 aaPredicted RBP17.89■□□□□ 0.45
CIRBP-239ENST00000592467 DNAJA3Q96EY1 480 aa17.89■□□□□ 0.45
CIRBP-239ENST00000592467 TMUB1Q9BVT8 246 aa17.89■□□□□ 0.45
CIRBP-239ENST00000592467 IKZF5Q9H5V7 419 aa17.89■□□□□ 0.45
CIRBP-239ENST00000592467 THUMPD1Q9NXG2 353 aaKnown RBP17.89■□□□□ 0.45
CIRBP-239ENST00000592467 PRSS50Q9UI38 385 aa17.89■□□□□ 0.45
CIRBP-239ENST00000592467 SPIN1Q9Y657 262 aaPredicted RBP17.89■□□□□ 0.45
CIRBP-239ENST00000592467 UQCRHLA0A096LP55 91 aa17.88■□□□□ 0.45
CIRBP-239ENST00000592467 ZC3H12DA2A288 527 aaKnown RBP17.88■□□□□ 0.45
CIRBP-239ENST00000592467 NR5A2O00482 541 aa17.88■□□□□ 0.45
CIRBP-239ENST00000592467 DNPH1O43598 174 aa17.88■□□□□ 0.45
CIRBP-239ENST00000592467 EDF1O60869 148 aaKnown RBP17.88■□□□□ 0.45
CIRBP-239ENST00000592467 TFPIP10646 304 aa17.88■□□□□ 0.45
CIRBP-239ENST00000592467 PRG2P13727 222 aa17.88■□□□□ 0.45
CIRBP-239ENST00000592467 CCNA2P20248 432 aa17.88■□□□□ 0.45
CIRBP-239ENST00000592467 POLR2HP52434 150 aaKnown RBP17.88■□□□□ 0.45
CIRBP-239ENST00000592467 IRX1P78414 480 aaPredicted RBP17.88■□□□□ 0.45
CIRBP-239ENST00000592467 FADDQ13158 208 aa17.88■□□□□ 0.45
CIRBP-239ENST00000592467 GNA13Q14344 377 aa17.88■□□□□ 0.45
CIRBP-239ENST00000592467 SFRP5Q5T4F7 317 aa17.88■□□□□ 0.45
CIRBP-239ENST00000592467 PRAMEF8Q5VWM4 474 aa17.88■□□□□ 0.45
CIRBP-239ENST00000592467 PRAMEF7Q5VXH5 474 aa17.88■□□□□ 0.45
CIRBP-239ENST00000592467 SEZ6L2Q6UXD5 910 aa17.88■□□□□ 0.45
CIRBP-239ENST00000592467 KRTAP1-3Q8IUG1 177 aa17.88■□□□□ 0.45
CIRBP-239ENST00000592467 GOLGA6L1Q8N7Z2 621 aa17.88■□□□□ 0.45
CIRBP-239ENST00000592467 S100PBPQ96BU1 408 aa17.88■□□□□ 0.45
CIRBP-239ENST00000592467 THOC1Q96FV9 657 aaKnown RBP17.88■□□□□ 0.45
CIRBP-239ENST00000592467 EDARQ9UNE0 448 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms