RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 ZNF232Q9UNY5 417 aa10.3□□□□□ -0.76
VMP1-211ENST00000591315 CORO2BQ9UQ03 480 aa10.3□□□□□ -0.76
VMP1-211ENST00000591315 PDZD2O15018 2839 aa10.3□□□□□ -0.76
VMP1-211ENST00000591315 ROS1P08922 2347 aa10.3□□□□□ -0.76
VMP1-211ENST00000591315 CREBBPQ92793 2442 aa10.29□□□□□ -0.76
VMP1-211ENST00000591315 CCDC168Q8NDH2 2452 aa10.29□□□□□ -0.76
VMP1-211ENST00000591315 ZNF814B7Z6K7 855 aa10.29□□□□□ -0.76
VMP1-211ENST00000591315 M0QX08 132 aa10.29□□□□□ -0.76
VMP1-211ENST00000591315 SYT5O00445 386 aa10.29□□□□□ -0.76
VMP1-211ENST00000591315 SMAD9O15198 467 aaKnown RBP10.29□□□□□ -0.76
VMP1-211ENST00000591315 TPST2O60704 377 aa10.29□□□□□ -0.76
VMP1-211ENST00000591315 CCDC22O60826 627 aa10.29□□□□□ -0.76
VMP1-211ENST00000591315 RAMP1O60894 148 aa10.29□□□□□ -0.76
VMP1-211ENST00000591315 SMNDC1O75940 238 aaKnown RBP eCLIP10.29□□□□□ -0.76
VMP1-211ENST00000591315 MFN2O95140 757 aa10.29□□□□□ -0.76
VMP1-211ENST00000591315 SYNGR4O95473 234 aa10.29□□□□□ -0.76
VMP1-211ENST00000591315 CGAP01215 116 aa10.29□□□□□ -0.76
VMP1-211ENST00000591315 ADSLP30566 484 aaPredicted RBP10.29□□□□□ -0.76
VMP1-211ENST00000591315 SLC7A1P30825 629 aa10.29□□□□□ -0.76
VMP1-211ENST00000591315 SLC1A3P43003 542 aa10.29□□□□□ -0.76
VMP1-211ENST00000591315 KRTAP10-9P60411 292 aa10.29□□□□□ -0.76
VMP1-211ENST00000591315 MYBPHQ13203 477 aa10.29□□□□□ -0.76
VMP1-211ENST00000591315 MAPRE2Q15555 327 aa10.29□□□□□ -0.76
VMP1-211ENST00000591315 SYT14P1Q58G82 188 aa10.29□□□□□ -0.76
VMP1-211ENST00000591315 COQ5Q5HYK3 327 aa10.29□□□□□ -0.76
VMP1-211ENST00000591315 C3orf33Q6P1S2 294 aa10.29□□□□□ -0.76
VMP1-211ENST00000591315 ZNF474Q6S9Z5 364 aaPredicted RBP10.29□□□□□ -0.76
VMP1-211ENST00000591315 RBM45Q8IUH3 476 aaKnown RBP10.29□□□□□ -0.76
VMP1-211ENST00000591315 MCEMP1Q8IX19 187 aa10.29□□□□□ -0.76
VMP1-211ENST00000591315 DMRTC2Q8IXT2 367 aaPredicted RBP10.29□□□□□ -0.76
VMP1-211ENST00000591315 ZNF610Q8N9Z0 462 aa10.29□□□□□ -0.76
VMP1-211ENST00000591315 HIPK4Q8NE63 616 aa10.29□□□□□ -0.76
VMP1-211ENST00000591315 OR4D11Q8NGI4 311 aa10.29□□□□□ -0.76
VMP1-211ENST00000591315 TAMM41Q96BW9 452 aa10.29□□□□□ -0.76
VMP1-211ENST00000591315 ZNF583Q96ND8 569 aa10.29□□□□□ -0.76
VMP1-211ENST00000591315 ZFP3Q96NJ6 502 aa10.29□□□□□ -0.76
VMP1-211ENST00000591315 SPOCK3Q9BQ16 436 aa10.29□□□□□ -0.76
VMP1-211ENST00000591315 SFXN3Q9BWM7 321 aa10.29□□□□□ -0.76
VMP1-211ENST00000591315 ADAM19Q9H013 955 aa10.29□□□□□ -0.76
VMP1-211ENST00000591315 CMTM6Q9NX76 183 aa10.29□□□□□ -0.76
VMP1-211ENST00000591315 FAM53CQ9NYF3 392 aa10.29□□□□□ -0.76
VMP1-211ENST00000591315 STOML1Q9UBI4 398 aa10.29□□□□□ -0.76
VMP1-211ENST00000591315 CHRNA9Q9UGM1 479 aa10.29□□□□□ -0.76
VMP1-211ENST00000591315 ING1Q9UK53 422 aaPredicted RBP10.29□□□□□ -0.76
VMP1-211ENST00000591315 IFT52Q9Y366 437 aa10.29□□□□□ -0.76
VMP1-211ENST00000591315 BBIP1A8MTZ0 92 aa10.28□□□□□ -0.76
VMP1-211ENST00000591315 M0R3H8 397 aa10.28□□□□□ -0.76
VMP1-211ENST00000591315 FAAHO00519 579 aa10.28□□□□□ -0.76
VMP1-211ENST00000591315 SLC22A2O15244 555 aa10.28□□□□□ -0.76
VMP1-211ENST00000591315 FESP07332 822 aa10.28□□□□□ -0.76
VMP1-211ENST00000591315 IMPDH2P12268 514 aa10.28□□□□□ -0.76
VMP1-211ENST00000591315 PTNP21246 168 aa10.28□□□□□ -0.76
VMP1-211ENST00000591315 EDNRAP25101 427 aa10.28□□□□□ -0.76
VMP1-211ENST00000591315 PRKAR1BP31321 381 aa10.28□□□□□ -0.76
VMP1-211ENST00000591315 PCGF2P35227 344 aa10.28□□□□□ -0.76
VMP1-211ENST00000591315 APOBEC1P41238 236 aaKnown RBP10.28□□□□□ -0.76
VMP1-211ENST00000591315 CPA2P48052 419 aa10.28□□□□□ -0.76
VMP1-211ENST00000591315 DIO1P49895 249 aa10.28□□□□□ -0.76
VMP1-211ENST00000591315 POLR2HP52434 150 aaKnown RBP10.28□□□□□ -0.76
VMP1-211ENST00000591315 FAM27E3Q08E93 113 aa10.28□□□□□ -0.76
VMP1-211ENST00000591315 DUSP7Q16829 419 aa10.28□□□□□ -0.76
VMP1-211ENST00000591315 VMACQ2NL98 169 aa10.28□□□□□ -0.76
VMP1-211ENST00000591315 FBXL19-AS1Q494R0 122 aa10.28□□□□□ -0.76
VMP1-211ENST00000591315 OR2A2Q6IF42 318 aa10.28□□□□□ -0.76
VMP1-211ENST00000591315 DHRS4L2Q6PKH6 230 aa10.28□□□□□ -0.76
VMP1-211ENST00000591315 TMPPEQ6ZT21 453 aa10.28□□□□□ -0.76
VMP1-211ENST00000591315 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.28□□□□□ -0.76
VMP1-211ENST00000591315 NUFIP2Q7Z417 695 aaKnown RBP10.28□□□□□ -0.76
VMP1-211ENST00000591315 PIGWQ7Z7B1 504 aa10.28□□□□□ -0.76
VMP1-211ENST00000591315 ARMC8Q8IUR7 673 aa10.28□□□□□ -0.76
VMP1-211ENST00000591315 P3H2Q8IVL5 708 aa10.28□□□□□ -0.76
VMP1-211ENST00000591315 TUSC5Q8IXB3 177 aa10.28□□□□□ -0.76
VMP1-211ENST00000591315 ZNF440Q8IYI8 595 aa10.28□□□□□ -0.76
VMP1-211ENST00000591315 OR8J3Q8NGG0 315 aa10.28□□□□□ -0.76
VMP1-211ENST00000591315 LINC01560Q8TB33 94 aa10.28□□□□□ -0.76
VMP1-211ENST00000591315 RNF128Q8TEB7 428 aa10.28□□□□□ -0.76
VMP1-211ENST00000591315 RNASE6Q93091 150 aaKnown RBP10.28□□□□□ -0.76
VMP1-211ENST00000591315 C3orf49Q96BT1 292 aa10.28□□□□□ -0.76
VMP1-211ENST00000591315 GPATCH1Q9BRR8 931 aaKnown RBP10.28□□□□□ -0.76
VMP1-211ENST00000591315 RBM24Q9BX46 236 aaKnown RBP10.28□□□□□ -0.76
VMP1-211ENST00000591315 C12orf49Q9H741 205 aa10.28□□□□□ -0.76
VMP1-211ENST00000591315 SERINC1Q9NRX5 453 aa10.28□□□□□ -0.76
VMP1-211ENST00000591315 GALNT8Q9NY28 637 aa10.28□□□□□ -0.76
VMP1-211ENST00000591315 PACSIN3Q9UKS6 424 aa10.28□□□□□ -0.76
VMP1-211ENST00000591315 MCTS1Q9ULC4 181 aaKnown RBP10.28□□□□□ -0.76
VMP1-211ENST00000591315 ANGPT4Q9Y264 503 aa10.28□□□□□ -0.76
VMP1-211ENST00000591315 A0A1B0GWA3 101 aa10.27□□□□□ -0.77
VMP1-211ENST00000591315 GJE1A6NN92 205 aa10.27□□□□□ -0.77
VMP1-211ENST00000591315 A8MXE2 369 aa10.27□□□□□ -0.77
VMP1-211ENST00000591315 TMEM229AB2RXF0 380 aa10.27□□□□□ -0.77
VMP1-211ENST00000591315 SULT2B1O00204 365 aa10.27□□□□□ -0.77
VMP1-211ENST00000591315 SS18L1O75177 396 aaPredicted RBP10.27□□□□□ -0.77
VMP1-211ENST00000591315 TNFRSF1BP20333 461 aa10.27□□□□□ -0.77
VMP1-211ENST00000591315 CD247P20963 164 aa10.27□□□□□ -0.77
VMP1-211ENST00000591315 AGTR1P30556 359 aa10.27□□□□□ -0.77
VMP1-211ENST00000591315 CPOXP36551 454 aa10.27□□□□□ -0.77
VMP1-211ENST00000591315 OR2B6P58173 313 aa10.27□□□□□ -0.77
VMP1-211ENST00000591315 RAC3P60763 192 aa10.27□□□□□ -0.77
VMP1-211ENST00000591315 RBBP4Q09028 425 aa10.27□□□□□ -0.77
VMP1-211ENST00000591315 NPTX1Q15818 432 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms