RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 TMEM72A0PK05 275 aa12.28□□□□□ -0.44
VMP1-210ENST00000589823 SEC14L5O43304 696 aa12.28□□□□□ -0.44
VMP1-210ENST00000589823 ZNF208O43345 1280 aa12.28□□□□□ -0.44
VMP1-210ENST00000589823 EFNA2O43921 213 aa12.28□□□□□ -0.44
VMP1-210ENST00000589823 C1QL1O75973 258 aa12.28□□□□□ -0.44
VMP1-210ENST00000589823 WISP1O95388 367 aa12.28□□□□□ -0.44
VMP1-210ENST00000589823 CPN1P15169 458 aa12.28□□□□□ -0.44
VMP1-210ENST00000589823 IL11P20809 199 aa12.28□□□□□ -0.44
VMP1-210ENST00000589823 SLC7A1P30825 629 aa12.28□□□□□ -0.44
VMP1-210ENST00000589823 SFTPDP35247 375 aa12.28□□□□□ -0.44
VMP1-210ENST00000589823 LHX2P50458 406 aa12.28□□□□□ -0.44
VMP1-210ENST00000589823 SMIM11AP58511 58 aa12.28□□□□□ -0.44
VMP1-210ENST00000589823 ACTR3P61158 418 aa12.28□□□□□ -0.44
VMP1-210ENST00000589823 TLE1Q04724 770 aa12.28□□□□□ -0.44
VMP1-210ENST00000589823 SRYQ05066 204 aa12.28□□□□□ -0.44
VMP1-210ENST00000589823 FOXD4Q12950 439 aaPredicted RBP12.28□□□□□ -0.44
VMP1-210ENST00000589823 TRAM2Q15035 370 aa12.28□□□□□ -0.44
VMP1-210ENST00000589823 TMEM176BQ3YBM2 270 aaPredicted RBP12.28□□□□□ -0.44
VMP1-210ENST00000589823 SYT14P1Q58G82 188 aa12.28□□□□□ -0.44
VMP1-210ENST00000589823 DCST1Q5T197 706 aa12.28□□□□□ -0.44
VMP1-210ENST00000589823 PDSS1Q5T2R2 415 aa12.28□□□□□ -0.44
VMP1-210ENST00000589823 TTC33Q6PID6 262 aaPredicted RBP12.28□□□□□ -0.44
VMP1-210ENST00000589823 CHMP1BQ7LBR1 199 aa12.28□□□□□ -0.44
VMP1-210ENST00000589823 PIWIL3Q7Z3Z3 882 aaKnown RBP12.28□□□□□ -0.44
VMP1-210ENST00000589823 TSPYL5Q86VY4 417 aaPredicted RBP12.28□□□□□ -0.44
VMP1-210ENST00000589823 OFCC1Q8IZS5 231 aa12.28□□□□□ -0.44
VMP1-210ENST00000589823 KLHL15Q96M94 604 aa12.28□□□□□ -0.44
VMP1-210ENST00000589823 PIP5K1AQ99755 562 aa12.28□□□□□ -0.44
VMP1-210ENST00000589823 CHID1Q9BWS9 393 aa12.28□□□□□ -0.44
VMP1-210ENST00000589823 RHCGQ9UBD6 479 aa12.28□□□□□ -0.44
VMP1-210ENST00000589823 CAMK2AQ9UQM7 478 aa12.28□□□□□ -0.44
VMP1-210ENST00000589823 A0A087WUJ7 227 aa12.27□□□□□ -0.45
VMP1-210ENST00000589823 A8MVM7 634 aa12.27□□□□□ -0.45
VMP1-210ENST00000589823 H0Y3Z8 333 aa12.27□□□□□ -0.45
VMP1-210ENST00000589823 EIF1AYO14602 144 aaKnown RBP12.27□□□□□ -0.45
VMP1-210ENST00000589823 PRRG2O14669 202 aa12.27□□□□□ -0.45
VMP1-210ENST00000589823 FFAR1O14842 300 aa12.27□□□□□ -0.45
VMP1-210ENST00000589823 SEMA7AO75326 666 aa12.27□□□□□ -0.45
VMP1-210ENST00000589823 DIRAS1O95057 198 aa12.27□□□□□ -0.45
VMP1-210ENST00000589823 MT-ND1P03886 318 aa12.27□□□□□ -0.45
VMP1-210ENST00000589823 OPN1LWP04000 364 aa12.27□□□□□ -0.45
VMP1-210ENST00000589823 THY1P04216 161 aa12.27□□□□□ -0.45
VMP1-210ENST00000589823 TPOP07202 933 aa12.27□□□□□ -0.45
VMP1-210ENST00000589823 H1F0P07305 194 aaKnown RBP12.27□□□□□ -0.45
VMP1-210ENST00000589823 ZNF708P17019 499 aa12.27□□□□□ -0.45
VMP1-210ENST00000589823 MAGEA2P43356 314 aa12.27□□□□□ -0.45
VMP1-210ENST00000589823 CLK1P49759 484 aaKnown RBP12.27□□□□□ -0.45
VMP1-210ENST00000589823 CLDN20P56880 219 aa12.27□□□□□ -0.45
VMP1-210ENST00000589823 RPS3AP61247 264 aaKnown RBP12.27□□□□□ -0.45
VMP1-210ENST00000589823 SPIBQ01892 262 aa12.27□□□□□ -0.45
VMP1-210ENST00000589823 C19orf57Q0VDD7 668 aa12.27□□□□□ -0.45
VMP1-210ENST00000589823 IQCCQ4KMZ1 466 aa12.27□□□□□ -0.45
VMP1-210ENST00000589823 C5orf46Q6UWT4 87 aa12.27□□□□□ -0.45
VMP1-210ENST00000589823 ESPNLQ6ZVH7 1005 aa12.27□□□□□ -0.45
VMP1-210ENST00000589823 FGD2Q7Z6J4 655 aa12.27□□□□□ -0.45
VMP1-210ENST00000589823 TSEN54Q7Z6J9 526 aaKnown RBP12.27□□□□□ -0.45
VMP1-210ENST00000589823 CHERPQ8IWX8 916 aaKnown RBP12.27□□□□□ -0.45
VMP1-210ENST00000589823 OR5M9Q8NGP3 310 aa12.27□□□□□ -0.45
VMP1-210ENST00000589823 FAM57AQ8TBR7 257 aa12.27□□□□□ -0.45
VMP1-210ENST00000589823 STK35Q8TDR2 534 aa12.27□□□□□ -0.45
VMP1-210ENST00000589823 MIB2Q96AX9 1013 aa12.27□□□□□ -0.45
VMP1-210ENST00000589823 WDYHV1Q96HA8 205 aa12.27□□□□□ -0.45
VMP1-210ENST00000589823 OR5B2Q96R09 309 aa12.27□□□□□ -0.45
VMP1-210ENST00000589823 PRDM14Q9GZV8 571 aa12.27□□□□□ -0.45
VMP1-210ENST00000589823 DENND2DQ9H6A0 471 aaPredicted RBP12.27□□□□□ -0.45
VMP1-210ENST00000589823 CCM2LQ9NUG4 571 aaPredicted RBP12.27□□□□□ -0.45
VMP1-210ENST00000589823 RALYQ9UKM9 306 aaKnown RBP12.27□□□□□ -0.45
VMP1-210ENST00000589823 HDGFL3Q9Y3E1 203 aa12.27□□□□□ -0.45
VMP1-210ENST00000589823 TESMINQ9Y4I5 508 aa12.27□□□□□ -0.45
VMP1-210ENST00000589823 SMG1Q96Q15 3661 aaKnown RBP12.26□□□□□ -0.45
VMP1-210ENST00000589823 COL6A6A6NMZ7 2263 aa12.26□□□□□ -0.45
VMP1-210ENST00000589823 ADAMDEC1O15204 470 aa12.26□□□□□ -0.45
VMP1-210ENST00000589823 ZNHIT1O43257 154 aa12.26□□□□□ -0.45
VMP1-210ENST00000589823 SLC19A2O60779 497 aa12.26□□□□□ -0.45
VMP1-210ENST00000589823 FKBP6O75344 327 aa12.26□□□□□ -0.45
VMP1-210ENST00000589823 PRSS23O95084 383 aa12.26□□□□□ -0.45
VMP1-210ENST00000589823 GADD45GO95257 159 aa12.26□□□□□ -0.45
VMP1-210ENST00000589823 LYPD3O95274 346 aa12.26□□□□□ -0.45
VMP1-210ENST00000589823 CST1P01037 141 aa12.26□□□□□ -0.45
VMP1-210ENST00000589823 SHC1P29353 583 aa12.26□□□□□ -0.45
VMP1-210ENST00000589823 RRM2P31350 389 aa12.26□□□□□ -0.45
VMP1-210ENST00000589823 RBM34P42696 430 aaKnown RBP12.26□□□□□ -0.45
VMP1-210ENST00000589823 CASP6P55212 293 aa12.26□□□□□ -0.45
VMP1-210ENST00000589823 CLDN18P56856 261 aa12.26□□□□□ -0.45
VMP1-210ENST00000589823 SF3B4Q15427 424 aaKnown RBP eCLIP12.26□□□□□ -0.45
VMP1-210ENST00000589823 C3AR1Q16581 482 aa12.26□□□□□ -0.45
VMP1-210ENST00000589823 GXYLT1Q4G148 440 aa12.26□□□□□ -0.45
VMP1-210ENST00000589823 FGD3Q5JSP0 725 aa12.26□□□□□ -0.45
VMP1-210ENST00000589823 HBMQ6B0K9 141 aa12.26□□□□□ -0.45
VMP1-210ENST00000589823 ZNF585AQ6P3V2 769 aa12.26□□□□□ -0.45
VMP1-210ENST00000589823 GGNQ86UU5 652 aa12.26□□□□□ -0.45
VMP1-210ENST00000589823 CD163Q86VB7 1156 aa12.26□□□□□ -0.45
VMP1-210ENST00000589823 ATCAYQ86WG3 371 aa12.26□□□□□ -0.45
VMP1-210ENST00000589823 NKAIN4Q8IVV8 208 aa12.26□□□□□ -0.45
VMP1-210ENST00000589823 GALNT11Q8NCW6 608 aa12.26□□□□□ -0.45
VMP1-210ENST00000589823 PAPD5Q8NDF8 572 aaKnown RBP12.26□□□□□ -0.45
VMP1-210ENST00000589823 PIK3C3Q8NEB9 887 aa12.26□□□□□ -0.45
VMP1-210ENST00000589823 OR2V1Q8NHB1 315 aa12.26□□□□□ -0.45
VMP1-210ENST00000589823 RELTQ969Z4 430 aa12.26□□□□□ -0.45
VMP1-210ENST00000589823 DUS3LQ96G46 650 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms