RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 TGM4P49221 684 aa12.96□□□□□ -0.33
NEDD4L-223ENST00000588516 TATDN3Q17R31 274 aa12.96□□□□□ -0.33
NEDD4L-223ENST00000588516 CEACAM19Q7Z692 300 aa12.96□□□□□ -0.33
NEDD4L-223ENST00000588516 MEX3DQ86XN8 651 aaKnown RBP12.96□□□□□ -0.33
NEDD4L-223ENST00000588516 CA13Q8N1Q1 262 aa12.96□□□□□ -0.33
NEDD4L-223ENST00000588516 BBS1Q8NFJ9 593 aa12.96□□□□□ -0.33
NEDD4L-223ENST00000588516 OR10G6Q8NH81 332 aa12.96□□□□□ -0.33
NEDD4L-223ENST00000588516 C15orf40Q8WUR7 153 aa12.96□□□□□ -0.33
NEDD4L-223ENST00000588516 SMPDL3BQ92485 455 aa12.96□□□□□ -0.33
NEDD4L-223ENST00000588516 SLC19A3Q9BZV2 496 aa12.96□□□□□ -0.33
NEDD4L-223ENST00000588516 RNF32Q9H0A6 362 aa12.96□□□□□ -0.33
NEDD4L-223ENST00000588516 NTNG1Q9Y2I2 539 aa12.96□□□□□ -0.33
NEDD4L-223ENST00000588516 A0A1W2PQF6 199 aa12.95□□□□□ -0.34
NEDD4L-223ENST00000588516 GXYLT2A0PJZ3 443 aa12.95□□□□□ -0.34
NEDD4L-223ENST00000588516 ZNF879B4DU55 563 aa12.95□□□□□ -0.34
NEDD4L-223ENST00000588516 INMT-MINDY4F8WBC2 141 aa12.95□□□□□ -0.34
NEDD4L-223ENST00000588516 CLDN4O14493 209 aa12.95□□□□□ -0.34
NEDD4L-223ENST00000588516 P2RX6O15547 441 aa12.95□□□□□ -0.34
NEDD4L-223ENST00000588516 SLC16A1P53985 500 aa12.95□□□□□ -0.34
NEDD4L-223ENST00000588516 PPP2CBP62714 309 aa12.95□□□□□ -0.34
NEDD4L-223ENST00000588516 PPP2CAP67775 309 aa12.95□□□□□ -0.34
NEDD4L-223ENST00000588516 IL10RAQ13651 578 aa12.95□□□□□ -0.34
NEDD4L-223ENST00000588516 GPR18Q14330 331 aa12.95□□□□□ -0.34
NEDD4L-223ENST00000588516 MAPK14Q16539 360 aa12.95□□□□□ -0.34
NEDD4L-223ENST00000588516 ARL9Q6T311 187 aa12.95□□□□□ -0.34
NEDD4L-223ENST00000588516 TRILQ7L0X0 811 aa12.95□□□□□ -0.34
NEDD4L-223ENST00000588516 OR4N5Q8IXE1 308 aa12.95□□□□□ -0.34
NEDD4L-223ENST00000588516 KDF1Q8NAX2 398 aaPredicted RBP12.95□□□□□ -0.34
NEDD4L-223ENST00000588516 ZFAND1Q8TCF1 268 aa12.95□□□□□ -0.34
NEDD4L-223ENST00000588516 GPBAR1Q8TDU6 330 aa12.95□□□□□ -0.34
NEDD4L-223ENST00000588516 JPH3Q8WXH2 748 aaPredicted RBP12.95□□□□□ -0.34
NEDD4L-223ENST00000588516 AKAP1Q92667 903 aaKnown RBP eCLIP12.95□□□□□ -0.34
NEDD4L-223ENST00000588516 TSACCQ96A04 125 aaPredicted RBP12.95□□□□□ -0.34
NEDD4L-223ENST00000588516 BMFQ96LC9 184 aa12.95□□□□□ -0.34
NEDD4L-223ENST00000588516 CNN2Q99439 309 aaKnown RBP12.95□□□□□ -0.34
NEDD4L-223ENST00000588516 GTPBP2Q9BX10 602 aaKnown RBP12.95□□□□□ -0.34
NEDD4L-223ENST00000588516 ACTR6Q9GZN1 396 aa12.95□□□□□ -0.34
NEDD4L-223ENST00000588516 TMEM168Q9H0V1 697 aa12.95□□□□□ -0.34
NEDD4L-223ENST00000588516 C6orf106Q9H6K1 298 aaPredicted RBP12.95□□□□□ -0.34
NEDD4L-223ENST00000588516 ENAMQ9NRM1 1142 aa12.95□□□□□ -0.34
NEDD4L-223ENST00000588516 HRASLS2Q9NWW9 162 aa12.95□□□□□ -0.34
NEDD4L-223ENST00000588516 EMC3Q9P0I2 261 aa12.95□□□□□ -0.34
NEDD4L-223ENST00000588516 CPNE7Q9UBL6 633 aa12.95□□□□□ -0.34
NEDD4L-223ENST00000588516 NUFIP1Q9UHK0 495 aaKnown RBP12.95□□□□□ -0.34
NEDD4L-223ENST00000588516 LHX6Q9UPM6 363 aa12.95□□□□□ -0.34
NEDD4L-223ENST00000588516 SLC6A5Q9Y345 797 aa12.95□□□□□ -0.34
NEDD4L-223ENST00000588516 RBMX2Q9Y388 322 aaKnown RBP12.95□□□□□ -0.34
NEDD4L-223ENST00000588516 NOTOA8MTQ0 251 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 PRAMEF26H0Y7S4 382 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 OGG1O15527 345 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 SCO2O43819 266 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 FGF17O60258 216 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 SRPX2O60687 465 aaPredicted RBP12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 TPPPO94811 219 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 SLC2A10O95528 541 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 CSF2P04141 144 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 TDGF1P13385 188 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 RNH1P13489 461 aaKnown RBP12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 ELK1P19419 428 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 RAB3BP20337 219 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 SLC2A5P22732 501 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 GALNSP34059 522 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 CD79BP40259 229 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 BLKP51451 505 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 CCR5P51681 352 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 NKX2-5P52952 324 aaPredicted RBP12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 RAG2P55895 527 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 CLDN2P57739 230 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 RRAS2P62070 204 aaPredicted RBP12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 MGAT2Q10469 447 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 EFR3AQ14156 821 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 GGTLC2Q14390 218 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 PON3Q15166 354 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 ZNF141Q15928 474 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 ALG11Q2TAA5 492 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 CCNJQ5T5M9 372 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 DMKNQ6E0U4 476 aaPredicted RBP12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 SFXN4Q6P4A7 337 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 RPL22L1Q6P5R6 122 aaKnown RBP12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 DPY19L2P2Q6ZN68 376 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 ZNF767PQ75MW2 155 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 OVCH1Q7RTY7 1134 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 KCTD20Q7Z5Y7 419 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 PXKQ7Z7A4 578 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 ZNF595Q8IYB9 648 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 TMEM99Q8N816 258 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 PFN4Q8NHR9 129 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 PTP4A1Q93096 173 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 SGTBQ96EQ0 304 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 RBM18Q96H35 190 aaKnown RBP12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 HYLS1Q96M11 299 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 TMEM246Q9BRR3 403 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 THAP7Q9BT49 309 aaPredicted RBP12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 ZNF426Q9BUY5 554 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 OR51V1Q9H2C8 321 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 DPAGT1Q9H3H5 408 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 SEMA6CQ9H3T2 930 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 Q9N2J8 555 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 ING4Q9UNL4 249 aa12.94□□□□□ -0.34
NEDD4L-223ENST00000588516 NUBP2Q9Y5Y2 271 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms