RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 DEPDC4Q8N2C3 294 aa9.28□□□□□ -0.92
APOC1-201ENST00000586638 NLGN4YQ8NFZ3 816 aaPredicted RBP9.28□□□□□ -0.92
APOC1-201ENST00000586638 OR13C2Q8NGS9 318 aa9.28□□□□□ -0.92
APOC1-201ENST00000586638 OR4Q3Q8NH05 313 aa9.28□□□□□ -0.92
APOC1-201ENST00000586638 M1APQ8TC57 530 aa9.28□□□□□ -0.92
APOC1-201ENST00000586638 RASL10BQ96S79 203 aa9.28□□□□□ -0.92
APOC1-201ENST00000586638 MEPEQ9NQ76 525 aaPredicted RBP9.28□□□□□ -0.92
APOC1-201ENST00000586638 PAK1IP1Q9NWT1 392 aaPredicted RBP9.28□□□□□ -0.92
APOC1-201ENST00000586638 SELENONQ9NZV5 590 aa9.28□□□□□ -0.92
APOC1-201ENST00000586638 MYOTQ9UBF9 498 aa9.28□□□□□ -0.92
APOC1-201ENST00000586638 FBXL4Q9UKA2 621 aa9.28□□□□□ -0.92
APOC1-201ENST00000586638 BLOC1S6Q9UL45 172 aa9.28□□□□□ -0.92
APOC1-201ENST00000586638 FARSAQ9Y285 508 aaKnown RBP9.28□□□□□ -0.92
APOC1-201ENST00000586638 TMEM5Q9Y2B1 443 aa9.28□□□□□ -0.92
APOC1-201ENST00000586638 CDH10Q9Y6N8 788 aa9.28□□□□□ -0.92
APOC1-201ENST00000586638 LOC101059948A0A1B0GTJ6 334 aa9.27□□□□□ -0.93
APOC1-201ENST00000586638 A0A1W2PQ72 361 aa9.27□□□□□ -0.93
APOC1-201ENST00000586638 C2orf72A6NCS6 295 aa9.27□□□□□ -0.93
APOC1-201ENST00000586638 ELOA3DA6NLF2 546 aaPredicted RBP9.27□□□□□ -0.93
APOC1-201ENST00000586638 EIF4E2O60573 245 aaKnown RBP9.27□□□□□ -0.93
APOC1-201ENST00000586638 NUDT14O95848 222 aa9.27□□□□□ -0.93
APOC1-201ENST00000586638 MT-ND2P03891 347 aa9.27□□□□□ -0.93
APOC1-201ENST00000586638 TFAP2AP05549 437 aa9.27□□□□□ -0.93
APOC1-201ENST00000586638 HTR1AP08908 422 aa9.27□□□□□ -0.93
APOC1-201ENST00000586638 FBXO45P0C2W1 286 aa9.27□□□□□ -0.93
APOC1-201ENST00000586638 SOX3P41225 446 aa9.27□□□□□ -0.93
APOC1-201ENST00000586638 RBM34P42696 430 aaKnown RBP9.27□□□□□ -0.93
APOC1-201ENST00000586638 TMED10P49755 219 aaKnown RBP9.27□□□□□ -0.93
APOC1-201ENST00000586638 FXYD6P3P58550 94 aa9.27□□□□□ -0.93
APOC1-201ENST00000586638 RPS15P62841 145 aaKnown RBP9.27□□□□□ -0.93
APOC1-201ENST00000586638 CRYZQ08257 329 aaKnown RBP9.27□□□□□ -0.93
APOC1-201ENST00000586638 COX10Q12887 443 aa9.27□□□□□ -0.93
APOC1-201ENST00000586638 GINS1Q14691 196 aa9.27□□□□□ -0.93
APOC1-201ENST00000586638 TOMM34Q15785 309 aaPredicted RBP9.27□□□□□ -0.93
APOC1-201ENST00000586638 PGGHGQ32M88 737 aa9.27□□□□□ -0.93
APOC1-201ENST00000586638 ELOA3BQ3SY89 546 aa9.27□□□□□ -0.93
APOC1-201ENST00000586638 NADK2Q4G0N4 442 aa9.27□□□□□ -0.93
APOC1-201ENST00000586638 CLEC12AQ5QGZ9 265 aa9.27□□□□□ -0.93
APOC1-201ENST00000586638 FOXB2Q5VYV0 432 aa9.27□□□□□ -0.93
APOC1-201ENST00000586638 WBP2NLQ6ICG8 309 aa9.27□□□□□ -0.93
APOC1-201ENST00000586638 ULK3Q6PHR2 472 aa9.27□□□□□ -0.93
APOC1-201ENST00000586638 NDUFAF7Q7L592 441 aa9.27□□□□□ -0.93
APOC1-201ENST00000586638 MRGPREQ86SM8 312 aa9.27□□□□□ -0.93
APOC1-201ENST00000586638 ATG4DQ86TL0 474 aaPredicted RBP9.27□□□□□ -0.93
APOC1-201ENST00000586638 RNF113BQ8IZP6 322 aaKnown RBP9.27□□□□□ -0.93
APOC1-201ENST00000586638 ELOA3Q8NG57 546 aa9.27□□□□□ -0.93
APOC1-201ENST00000586638 OR10G3Q8NGC4 313 aa9.27□□□□□ -0.93
APOC1-201ENST00000586638 ZNF563Q8TA94 476 aa9.27□□□□□ -0.93
APOC1-201ENST00000586638 DNAJA4Q8WW22 397 aaPredicted RBP9.27□□□□□ -0.93
APOC1-201ENST00000586638 SPACA9Q96E40 222 aaPredicted RBP9.27□□□□□ -0.93
APOC1-201ENST00000586638 MPP4Q96JB8 637 aa9.27□□□□□ -0.93
APOC1-201ENST00000586638 SAMD8Q96LT4 415 aa9.27□□□□□ -0.93
APOC1-201ENST00000586638 HS6ST2Q96MM7 605 aa9.27□□□□□ -0.93
APOC1-201ENST00000586638 IL4I1Q96RQ9 567 aa9.27□□□□□ -0.93
APOC1-201ENST00000586638 ZNF426Q9BUY5 554 aa9.27□□□□□ -0.93
APOC1-201ENST00000586638 TSSK6Q9BXA6 273 aa9.27□□□□□ -0.93
APOC1-201ENST00000586638 GALNT9Q9HCQ5 603 aa9.27□□□□□ -0.93
APOC1-201ENST00000586638 MMP25Q9NPA2 562 aa9.27□□□□□ -0.93
APOC1-201ENST00000586638 DNAJC27Q9NZQ0 273 aa9.27□□□□□ -0.93
APOC1-201ENST00000586638 IL20RAQ9UHF4 553 aa9.27□□□□□ -0.93
APOC1-201ENST00000586638 DOPEY1Q5JWR5 2465 aa9.26□□□□□ -0.93
APOC1-201ENST00000586638 IGKV1D-42A0A075B6H8 117 aa9.26□□□□□ -0.93
APOC1-201ENST00000586638 TRAV27A0A087WT01 109 aa9.26□□□□□ -0.93
APOC1-201ENST00000586638 A0A087WUJ7 227 aa9.26□□□□□ -0.93
APOC1-201ENST00000586638 EFCAB9A8MZ26 197 aa9.26□□□□□ -0.93
APOC1-201ENST00000586638 B4DXG7 233 aa9.26□□□□□ -0.93
APOC1-201ENST00000586638 PRKYO43930 277 aa9.26□□□□□ -0.93
APOC1-201ENST00000586638 CDC40O60508 579 aaKnown RBP eCLIP9.26□□□□□ -0.93
APOC1-201ENST00000586638 ITGA10O75578 1167 aa9.26□□□□□ -0.93
APOC1-201ENST00000586638 HPP00738 406 aa9.26□□□□□ -0.93
APOC1-201ENST00000586638 CD63P08962 238 aa9.26□□□□□ -0.93
APOC1-201ENST00000586638 CCDC159P0C7I6 412 aa9.26□□□□□ -0.93
APOC1-201ENST00000586638 SAGP10523 405 aaPredicted RBP9.26□□□□□ -0.93
APOC1-201ENST00000586638 CCNA2P20248 432 aa9.26□□□□□ -0.93
APOC1-201ENST00000586638 PTGDSP41222 190 aa9.26□□□□□ -0.93
APOC1-201ENST00000586638 RPL5P46777 297 aaKnown RBP9.26□□□□□ -0.93
APOC1-201ENST00000586638 SLC6A8P48029 635 aa9.26□□□□□ -0.93
APOC1-201ENST00000586638 ALDH3B2P48448 385 aa9.26□□□□□ -0.93
APOC1-201ENST00000586638 P2RX1P51575 399 aa9.26□□□□□ -0.93
APOC1-201ENST00000586638 GAS1P54826 345 aa9.26□□□□□ -0.93
APOC1-201ENST00000586638 CTBP2P56545 445 aa9.26□□□□□ -0.93
APOC1-201ENST00000586638 TUBA4AP68366 448 aa9.26□□□□□ -0.93
APOC1-201ENST00000586638 CDK5Q00535 292 aa9.26□□□□□ -0.93
APOC1-201ENST00000586638 Q0VFX4 171 aa9.26□□□□□ -0.93
APOC1-201ENST00000586638 ATP1A4Q13733 1029 aa9.26□□□□□ -0.93
APOC1-201ENST00000586638 QPRTQ15274 297 aa9.26□□□□□ -0.93
APOC1-201ENST00000586638 NEDD8Q15843 81 aa9.26□□□□□ -0.93
APOC1-201ENST00000586638 OR5M10Q6IEU7 315 aa9.26□□□□□ -0.93
APOC1-201ENST00000586638 ACSM5Q6NUN0 579 aa9.26□□□□□ -0.93
APOC1-201ENST00000586638 SLC30A6Q6NXT4 461 aa9.26□□□□□ -0.93
APOC1-201ENST00000586638 POMZP3Q6PJE2 187 aa9.26□□□□□ -0.93
APOC1-201ENST00000586638 CASP12Q6UXS9 341 aa9.26□□□□□ -0.93
APOC1-201ENST00000586638 LINC00114Q6XXX2 140 aa9.26□□□□□ -0.93
APOC1-201ENST00000586638 PTCHD4Q6ZW05 846 aa9.26□□□□□ -0.93
APOC1-201ENST00000586638 KCTD8Q6ZWB6 473 aa9.26□□□□□ -0.93
APOC1-201ENST00000586638 AHSA2Q719I0 299 aa9.26□□□□□ -0.93
APOC1-201ENST00000586638 BCDIN3DQ7Z5W3 292 aaKnown RBP9.26□□□□□ -0.93
APOC1-201ENST00000586638 VASH2Q86V25 355 aa9.26□□□□□ -0.93
APOC1-201ENST00000586638 CLDN22Q8N7P3 220 aa9.26□□□□□ -0.93
APOC1-201ENST00000586638 RHOXF1Q8NHV9 184 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms