RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 TMED7-TICAM2A0A0A6YYA0 188 aa24.25■■□□□ 1.47
SMARCD2-210ENST00000584400 A6NNC1 897 aa24.25■■□□□ 1.47
SMARCD2-210ENST00000584400 DNPH1O43598 174 aa24.25■■□□□ 1.47
SMARCD2-210ENST00000584400 CTAG2O75638 210 aa24.25■■□□□ 1.47
SMARCD2-210ENST00000584400 YES1P07947 543 aa24.25■■□□□ 1.47
SMARCD2-210ENST00000584400 ADSLP30566 484 aaPredicted RBP24.25■■□□□ 1.47
SMARCD2-210ENST00000584400 FAM27E3Q08E93 113 aa24.25■■□□□ 1.47
SMARCD2-210ENST00000584400 WBP2NLQ6ICG8 309 aa24.25■■□□□ 1.47
SMARCD2-210ENST00000584400 ZNF607Q96SK3 696 aa24.25■■□□□ 1.47
SMARCD2-210ENST00000584400 CPPED1Q9BRF8 314 aaPredicted RBP24.25■■□□□ 1.47
SMARCD2-210ENST00000584400 OSGIN1Q9UJX0 560 aa24.25■■□□□ 1.47
SMARCD2-210ENST00000584400 TMED7Q9Y3B3 224 aa24.25■■□□□ 1.47
SMARCD2-210ENST00000584400 INTS1Q8N201 2190 aaKnown RBP24.25■■□□□ 1.47
SMARCD2-210ENST00000584400 SH3D21A4FU49 640 aa24.24■■□□□ 1.47
SMARCD2-210ENST00000584400 PRORSD1PA6NEY8 169 aa24.24■■□□□ 1.47
SMARCD2-210ENST00000584400 C16orf97H3BN30 126 aa24.24■■□□□ 1.47
SMARCD2-210ENST00000584400 SERPINB7O75635 380 aa24.24■■□□□ 1.47
SMARCD2-210ENST00000584400 PMS2P2O95744 297 aa24.24■■□□□ 1.47
SMARCD2-210ENST00000584400 GKN3PP0CG01 181 aa24.24■■□□□ 1.47
SMARCD2-210ENST00000584400 CD1EP15812 388 aa24.24■■□□□ 1.47
SMARCD2-210ENST00000584400 PRKAR1BP31321 381 aa24.24■■□□□ 1.47
SMARCD2-210ENST00000584400 RBBP4Q09028 425 aa24.24■■□□□ 1.47
SMARCD2-210ENST00000584400 SCARB2Q14108 478 aa24.24■■□□□ 1.47
SMARCD2-210ENST00000584400 MMEL1Q495T6 779 aa24.24■■□□□ 1.47
SMARCD2-210ENST00000584400 FBXW10Q5XX13 1052 aa24.24■■□□□ 1.47
SMARCD2-210ENST00000584400 CLIP4Q8N3C7 705 aa24.24■■□□□ 1.47
SMARCD2-210ENST00000584400 HIPK4Q8NE63 616 aa24.24■■□□□ 1.47
SMARCD2-210ENST00000584400 BHLHE22Q8NFJ8 381 aaPredicted RBP24.24■■□□□ 1.47
SMARCD2-210ENST00000584400 BCO1Q9HAY6 547 aa24.24■■□□□ 1.47
SMARCD2-210ENST00000584400 RASSF1Q9NS23 344 aa24.24■■□□□ 1.47
SMARCD2-210ENST00000584400 ANGPT4Q9Y264 503 aa24.24■■□□□ 1.47
SMARCD2-210ENST00000584400 TRAPPC4Q9Y296 219 aa24.24■■□□□ 1.47
SMARCD2-210ENST00000584400 NOTCH2Q04721 2471 aa24.24■■□□□ 1.47
SMARCD2-210ENST00000584400 CYTIPO60759 359 aa24.23■■□□□ 1.47
SMARCD2-210ENST00000584400 CCNA2P20248 432 aa24.23■■□□□ 1.47
SMARCD2-210ENST00000584400 CXCR1P25024 350 aa24.23■■□□□ 1.47
SMARCD2-210ENST00000584400 UGT2B10P36537 528 aa24.23■■□□□ 1.47
SMARCD2-210ENST00000584400 ACAA2P42765 397 aaKnown RBP24.23■■□□□ 1.47
SMARCD2-210ENST00000584400 KRTAP10-9P60411 292 aa24.23■■□□□ 1.47
SMARCD2-210ENST00000584400 CYLC2Q14093 348 aaPredicted RBP24.23■■□□□ 1.47
SMARCD2-210ENST00000584400 COQ5Q5HYK3 327 aa24.23■■□□□ 1.47
SMARCD2-210ENST00000584400 CGB2Q6NT52 195 aa24.23■■□□□ 1.47
SMARCD2-210ENST00000584400 MTDHQ86UE4 582 aaKnown RBP24.23■■□□□ 1.47
SMARCD2-210ENST00000584400 RETREG3Q86VR2 466 aa24.23■■□□□ 1.47
SMARCD2-210ENST00000584400 TUSC5Q8IXB3 177 aa24.23■■□□□ 1.47
SMARCD2-210ENST00000584400 CADM2Q8N3J6 435 aa24.23■■□□□ 1.47
SMARCD2-210ENST00000584400 C11orf65Q8NCR3 313 aa24.23■■□□□ 1.47
SMARCD2-210ENST00000584400 SH3GL1Q99961 368 aa24.23■■□□□ 1.47
SMARCD2-210ENST00000584400 POLDIP3Q9BY77 421 aaKnown RBP24.23■■□□□ 1.47
SMARCD2-210ENST00000584400 ADAM19Q9H013 955 aa24.23■■□□□ 1.47
SMARCD2-210ENST00000584400 CLEC4MQ9H2X3 399 aaPredicted RBP24.23■■□□□ 1.47
SMARCD2-210ENST00000584400 IKZF5Q9H5V7 419 aa24.23■■□□□ 1.47
SMARCD2-210ENST00000584400 ZNF226Q9NYT6 803 aa24.23■■□□□ 1.47
SMARCD2-210ENST00000584400 TMEM181Q9P2C4 612 aa24.23■■□□□ 1.47
SMARCD2-210ENST00000584400 EDARQ9UNE0 448 aa24.23■■□□□ 1.47
SMARCD2-210ENST00000584400 NAV2Q8IVL1 2488 aa24.23■■□□□ 1.47
SMARCD2-210ENST00000584400 FAM221AA4D161 298 aa24.22■■□□□ 1.47
SMARCD2-210ENST00000584400 BBIP1A8MTZ0 92 aa24.22■■□□□ 1.47
SMARCD2-210ENST00000584400 NPPAP01160 153 aa24.22■■□□□ 1.47
SMARCD2-210ENST00000584400 RASGEF1BQ0VAM2 473 aa24.22■■□□□ 1.47
SMARCD2-210ENST00000584400 CYP51A1Q16850 503 aa24.22■■□□□ 1.47
SMARCD2-210ENST00000584400 EXOC3L2Q2M3D2 409 aa24.22■■□□□ 1.47
SMARCD2-210ENST00000584400 C12orf49Q9H741 205 aa24.22■■□□□ 1.47
SMARCD2-210ENST00000584400 SAR1AQ9NR31 198 aa24.22■■□□□ 1.47
SMARCD2-210ENST00000584400 SLC13A4Q9UKG4 626 aa24.22■■□□□ 1.47
SMARCD2-210ENST00000584400 CENPEQ02224 2701 aa24.22■■□□□ 1.47
SMARCD2-210ENST00000584400 IGHV3-15A0A0B4J1V0 119 aa24.21■■□□□ 1.47
SMARCD2-210ENST00000584400 ENO4A6NNW6 628 aa24.21■■□□□ 1.47
SMARCD2-210ENST00000584400 SMAD9O15198 467 aaKnown RBP24.21■■□□□ 1.47
SMARCD2-210ENST00000584400 EIF1BO60739 113 aaKnown RBP24.21■■□□□ 1.47
SMARCD2-210ENST00000584400 FESP07332 822 aa24.21■■□□□ 1.47
SMARCD2-210ENST00000584400 SF3A3Q12874 501 aaKnown RBP eCLIP24.21■■□□□ 1.476e-6■□□□□ 10.9
SMARCD2-210ENST00000584400 KLF10Q13118 480 aa24.21■■□□□ 1.47
SMARCD2-210ENST00000584400 TRMT5Q32P41 509 aaKnown RBP24.21■■□□□ 1.47
SMARCD2-210ENST00000584400 MED12LQ86YW9 2145 aa24.21■■□□□ 1.47
SMARCD2-210ENST00000584400 SLC30A8Q8IWU4 369 aa24.21■■□□□ 1.47
SMARCD2-210ENST00000584400 C10orf111Q8N326 155 aa24.21■■□□□ 1.47
SMARCD2-210ENST00000584400 ARL5BQ96KC2 179 aa24.21■■□□□ 1.47
SMARCD2-210ENST00000584400 PSD2Q9BQI7 771 aa24.21■■□□□ 1.47
SMARCD2-210ENST00000584400 GPATCH1Q9BRR8 931 aaKnown RBP24.21■■□□□ 1.47
SMARCD2-210ENST00000584400 MED18Q9BUE0 208 aa24.21■■□□□ 1.47
SMARCD2-210ENST00000584400 OR11A1Q9GZK7 315 aa24.21■■□□□ 1.47
SMARCD2-210ENST00000584400 EVA1AQ9H8M9 152 aa24.21■■□□□ 1.47
SMARCD2-210ENST00000584400 KLHL28Q9NXS3 571 aa24.21■■□□□ 1.47
SMARCD2-210ENST00000584400 EMC3Q9P0I2 261 aa24.21■■□□□ 1.47
SMARCD2-210ENST00000584400 TMEM72A0PK05 275 aa24.2■■□□□ 1.46
SMARCD2-210ENST00000584400 ZNF724A8MTY0 619 aa24.2■■□□□ 1.46
SMARCD2-210ENST00000584400 SLC22A2O15244 555 aa24.2■■□□□ 1.46
SMARCD2-210ENST00000584400 PPP3CBP16298 524 aa24.2■■□□□ 1.46
SMARCD2-210ENST00000584400 OR2B6P58173 313 aa24.2■■□□□ 1.46
SMARCD2-210ENST00000584400 MTPNP58546 118 aa24.2■■□□□ 1.46
SMARCD2-210ENST00000584400 SLC35A1P78382 337 aa24.2■■□□□ 1.46
SMARCD2-210ENST00000584400 PDK3Q15120 406 aa24.2■■□□□ 1.46
SMARCD2-210ENST00000584400 DHRS4L2Q6PKH6 230 aa24.2■■□□□ 1.46
SMARCD2-210ENST00000584400 SERPINA11Q86U17 422 aa24.2■■□□□ 1.46
SMARCD2-210ENST00000584400 PIGXQ8TBF5 258 aa24.2■■□□□ 1.46
SMARCD2-210ENST00000584400 ZNF317Q96PQ6 595 aaPredicted RBP24.2■■□□□ 1.46
SMARCD2-210ENST00000584400 POTEKPQ9BYX7 375 aa24.2■■□□□ 1.46
SMARCD2-210ENST00000584400 KLHL4Q9C0H6 718 aa24.2■■□□□ 1.46
SMARCD2-210ENST00000584400 CHST2Q9Y4C5 530 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms