RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 KLRB1Q12918 225 aa8.61□□□□□ -1.03
RFFL-210ENST00000582308 RCN1Q15293 331 aa8.61□□□□□ -1.03
RFFL-210ENST00000582308 SEC23BQ15437 767 aa8.61□□□□□ -1.03
RFFL-210ENST00000582308 ELOA3BQ3SY89 546 aa8.61□□□□□ -1.03
RFFL-210ENST00000582308 FGD3Q5JSP0 725 aa8.61□□□□□ -1.03
RFFL-210ENST00000582308 SWT1Q5T5J6 900 aaKnown RBP8.61□□□□□ -1.03
RFFL-210ENST00000582308 ZNF324BQ6AW86 544 aaPredicted RBP8.61□□□□□ -1.03
RFFL-210ENST00000582308 PODNL1Q6PEZ8 512 aa8.61□□□□□ -1.03
RFFL-210ENST00000582308 TRILQ7L0X0 811 aa8.61□□□□□ -1.03
RFFL-210ENST00000582308 TMEM179BQ7Z7N9 219 aa8.61□□□□□ -1.03
RFFL-210ENST00000582308 P3H2Q8IVL5 708 aa8.61□□□□□ -1.03
RFFL-210ENST00000582308 PQLC1Q8N2U9 271 aa8.61□□□□□ -1.03
RFFL-210ENST00000582308 ELOA3Q8NG57 546 aa8.61□□□□□ -1.03
RFFL-210ENST00000582308 RNF217Q8TC41 542 aa8.61□□□□□ -1.03
RFFL-210ENST00000582308 SLC7A13Q8TCU3 470 aa8.61□□□□□ -1.03
RFFL-210ENST00000582308 TMEM255BQ8WV15 326 aa8.61□□□□□ -1.03
RFFL-210ENST00000582308 DTNBP1Q96EV8 351 aa8.61□□□□□ -1.03
RFFL-210ENST00000582308 CENPNQ96H22 339 aaPredicted RBP8.61□□□□□ -1.03
RFFL-210ENST00000582308 PIGQQ9BRB3 760 aa8.61□□□□□ -1.03
RFFL-210ENST00000582308 ZNF426Q9BUY5 554 aa8.61□□□□□ -1.03
RFFL-210ENST00000582308 C12orf10Q9HB07 376 aa8.61□□□□□ -1.03
RFFL-210ENST00000582308 SELENONQ9NZV5 590 aa8.61□□□□□ -1.03
RFFL-210ENST00000582308 NKX1-2Q9UD57 310 aaPredicted RBP8.61□□□□□ -1.03
RFFL-210ENST00000582308 ZNF337Q9Y3M9 751 aa8.61□□□□□ -1.03
RFFL-210ENST00000582308 SAMHD1Q9Y3Z3 626 aaKnown RBP8.61□□□□□ -1.03
RFFL-210ENST00000582308 LYVE1Q9Y5Y7 322 aa8.61□□□□□ -1.03
RFFL-210ENST00000582308 ARHGAP21Q5T5U3 1957 aa8.61□□□□□ -1.03
RFFL-210ENST00000582308 MED12LQ86YW9 2145 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 SPENQ96T58 3664 aaKnown RBP8.6□□□□□ -1.03
RFFL-210ENST00000582308 NBASA2RRP1 2371 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 A0A087WUU8 490 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 ZC3H12DA2A288 527 aaKnown RBP8.6□□□□□ -1.03
RFFL-210ENST00000582308 NPIPA5E9PKD4 350 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 TNFRSF11BO00300 401 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 GNGT2O14610 69 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 ADAMDEC1O15204 470 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 SUSD5O60279 629 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 MGRN1O60291 552 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 GADD45GO95257 159 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 IGHG3P01860 377 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 CRYABP02511 175 aaKnown RBP8.6□□□□□ -1.03
RFFL-210ENST00000582308 OPN1LWP04000 364 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 ANPEPP15144 967 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 CHMP24386 653 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 SHC1P29353 583 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 STARP49675 285 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 UGT2B15P54855 530 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 EGR4Q05215 589 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 LAPTM4AQ15012 233 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 EXOC3L2Q2M3D2 409 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 PRR30Q53SZ7 412 aaPredicted RBP8.6□□□□□ -1.03
RFFL-210ENST00000582308 C1QL3Q5VWW1 255 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 TBPL2Q6SJ96 375 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 FAM180AQ6UWF9 173 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 ATP6V1C2Q8NEY4 427 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 NEIL3Q8TAT5 605 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 RELTQ969Z4 430 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 SNRNP40Q96DI7 357 aaKnown RBP8.6□□□□□ -1.03
RFFL-210ENST00000582308 MPP4Q96JB8 637 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 SFXN2Q96NB2 322 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 ALPK1Q96QP1 1244 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 EPYCQ99645 322 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 BARD1Q99728 777 aaKnown RBP8.6□□□□□ -1.03
RFFL-210ENST00000582308 TMEM43Q9BTV4 400 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 OR11A1Q9GZK7 315 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 SEMA6AQ9H2E6 1030 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 ANKRD19PQ9H560 264 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 TMEM185BQ9H7F4 350 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 DCLRE1BQ9H816 532 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 REEP1Q9H902 201 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 PLSCR2Q9NRY7 297 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 SPRR3Q9UBC9 169 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 CHRNA9Q9UGM1 479 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 NPIPA1Q9UND3 350 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 U3KQV3 271 aa8.6□□□□□ -1.03
RFFL-210ENST00000582308 TRGV5A0A0B4J1U4 118 aa8.59□□□□□ -1.03
RFFL-210ENST00000582308 A0A1B0GVC2 190 aa8.59□□□□□ -1.03
RFFL-210ENST00000582308 SH3PXD2BA1X283 911 aa8.59□□□□□ -1.03
RFFL-210ENST00000582308 A8MVM7 634 aa8.59□□□□□ -1.03
RFFL-210ENST00000582308 ATXN7O15265 892 aaPredicted RBP8.59□□□□□ -1.03
RFFL-210ENST00000582308 ZNF208O43345 1280 aa8.59□□□□□ -1.03
RFFL-210ENST00000582308 PIP5K1CO60331 668 aa8.59□□□□□ -1.03
RFFL-210ENST00000582308 HCN1O60741 890 aa8.59□□□□□ -1.03
RFFL-210ENST00000582308 NPIPB7O75200 414 aa8.59□□□□□ -1.03
RFFL-210ENST00000582308 PEPDP12955 493 aa8.59□□□□□ -1.03
RFFL-210ENST00000582308 BMP7P18075 431 aa8.59□□□□□ -1.03
RFFL-210ENST00000582308 ELK4P28324 431 aa8.59□□□□□ -1.03
RFFL-210ENST00000582308 DNAJA1P31689 397 aaKnown RBP8.59□□□□□ -1.03
RFFL-210ENST00000582308 SFTPDP35247 375 aa8.59□□□□□ -1.03
RFFL-210ENST00000582308 RBM34P42696 430 aaKnown RBP8.59□□□□□ -1.03
RFFL-210ENST00000582308 LHX2P50458 406 aa8.59□□□□□ -1.03
RFFL-210ENST00000582308 CLDN15P56746 228 aa8.59□□□□□ -1.03
RFFL-210ENST00000582308 CLDN20P56880 219 aa8.59□□□□□ -1.03
RFFL-210ENST00000582308 RAC1P63000 192 aa8.59□□□□□ -1.03
RFFL-210ENST00000582308 SELENBP1Q13228 472 aa8.59□□□□□ -1.03
RFFL-210ENST00000582308 RIPK1Q13546 671 aa8.59□□□□□ -1.03
RFFL-210ENST00000582308 TMEM176BQ3YBM2 270 aaPredicted RBP8.59□□□□□ -1.03
RFFL-210ENST00000582308 DCST1Q5T197 706 aa8.59□□□□□ -1.03
RFFL-210ENST00000582308 VASNQ6EMK4 673 aa8.59□□□□□ -1.03
RFFL-210ENST00000582308 ZNF770Q6IQ21 691 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms