RNA–Protein interactions for RNA: ENST00000582232.1

GGA3-211, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-211ENST00000582232 LDLRP01130 860 aa10.39□□□□□ -0.75
GGA3-211ENST00000582232 CXCR1P25024 350 aa10.39□□□□□ -0.75
GGA3-211ENST00000582232 RAC1P63000 192 aa10.39□□□□□ -0.75
GGA3-211ENST00000582232 SPIBQ01892 262 aa10.39□□□□□ -0.75
GGA3-211ENST00000582232 RIPK1Q13546 671 aa10.39□□□□□ -0.75
GGA3-211ENST00000582232 BCL2A1Q16548 175 aa10.39□□□□□ -0.75
GGA3-211ENST00000582232 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.39□□□□□ -0.75
GGA3-211ENST00000582232 ELOA3BQ3SY89 546 aa10.39□□□□□ -0.75
GGA3-211ENST00000582232 KRTCAP3Q53RY4 240 aa10.39□□□□□ -0.75
GGA3-211ENST00000582232 RAET1LQ5VY80 246 aa10.39□□□□□ -0.75
GGA3-211ENST00000582232 VASNQ6EMK4 673 aa10.39□□□□□ -0.75
GGA3-211ENST00000582232 C3orf33Q6P1S2 294 aa10.39□□□□□ -0.75
GGA3-211ENST00000582232 WDR88Q6ZMY6 472 aa10.39□□□□□ -0.75
GGA3-211ENST00000582232 NKAIN4Q8IVV8 208 aa10.39□□□□□ -0.75
GGA3-211ENST00000582232 RNF113BQ8IZP6 322 aaKnown RBP10.39□□□□□ -0.75
GGA3-211ENST00000582232 ELOA3Q8NG57 546 aa10.39□□□□□ -0.75
GGA3-211ENST00000582232 OR4C15Q8NGM1 316 aa10.39□□□□□ -0.75
GGA3-211ENST00000582232 SLC7A13Q8TCU3 470 aa10.39□□□□□ -0.75
GGA3-211ENST00000582232 STK35Q8TDR2 534 aa10.39□□□□□ -0.75
GGA3-211ENST00000582232 FAR1Q8WVX9 515 aa10.39□□□□□ -0.75
GGA3-211ENST00000582232 ACOT11Q8WXI4 607 aaPredicted RBP10.39□□□□□ -0.75
GGA3-211ENST00000582232 SFXN2Q96NB2 322 aa10.39□□□□□ -0.75
GGA3-211ENST00000582232 EPYCQ99645 322 aa10.39□□□□□ -0.75
GGA3-211ENST00000582232 BDH2Q9BUT1 245 aa10.39□□□□□ -0.75
GGA3-211ENST00000582232 SLC19A3Q9BZV2 496 aa10.39□□□□□ -0.75
GGA3-211ENST00000582232 DEFB127Q9H1M4 99 aa10.39□□□□□ -0.75
GGA3-211ENST00000582232 DCLRE1BQ9H816 532 aa10.39□□□□□ -0.75
GGA3-211ENST00000582232 REEP1Q9H902 201 aa10.39□□□□□ -0.75
GGA3-211ENST00000582232 NTN4Q9HB63 628 aa10.39□□□□□ -0.75
GGA3-211ENST00000582232 SERINC1Q9NRX5 453 aa10.39□□□□□ -0.75
GGA3-211ENST00000582232 RHCGQ9UBD6 479 aa10.39□□□□□ -0.75
GGA3-211ENST00000582232 STOML1Q9UBI4 398 aa10.39□□□□□ -0.75
GGA3-211ENST00000582232 RPH3AQ9Y2J0 694 aaPredicted RBP10.39□□□□□ -0.75
GGA3-211ENST00000582232 ZNF337Q9Y3M9 751 aa10.39□□□□□ -0.75
GGA3-211ENST00000582232 TESMINQ9Y4I5 508 aa10.39□□□□□ -0.75
GGA3-211ENST00000582232 SPIN1Q9Y657 262 aaPredicted RBP10.39□□□□□ -0.75
GGA3-211ENST00000582232 AP4B1Q9Y6B7 739 aa10.39□□□□□ -0.75
GGA3-211ENST00000582232 SVILO95425 2214 aa10.39□□□□□ -0.75
GGA3-211ENST00000582232 IGKV1D-42A0A075B6H8 117 aa10.38□□□□□ -0.75
GGA3-211ENST00000582232 TMEM72A0PK05 275 aa10.38□□□□□ -0.75
GGA3-211ENST00000582232 A8MVM7 634 aa10.38□□□□□ -0.75
GGA3-211ENST00000582232 SHISA8B8ZZ34 492 aa10.38□□□□□ -0.75
GGA3-211ENST00000582232 AQP7O14520 342 aa10.38□□□□□ -0.75
GGA3-211ENST00000582232 FZD7O75084 574 aa10.38□□□□□ -0.75
GGA3-211ENST00000582232 PEPDP12955 493 aa10.38□□□□□ -0.75
GGA3-211ENST00000582232 IL11P20809 199 aa10.38□□□□□ -0.75
GGA3-211ENST00000582232 FUT4P22083 530 aa10.38□□□□□ -0.75
GGA3-211ENST00000582232 DNAJA1P31689 397 aaKnown RBP10.38□□□□□ -0.75
GGA3-211ENST00000582232 GCKP35557 465 aa10.38□□□□□ -0.75
GGA3-211ENST00000582232 TDGF1P3P51864 188 aa10.38□□□□□ -0.75
GGA3-211ENST00000582232 EGR4Q05215 589 aa10.38□□□□□ -0.75
GGA3-211ENST00000582232 GTF3C1Q12789 2109 aa10.38□□□□□ -0.75
GGA3-211ENST00000582232 HMBOX1Q6NT76 420 aa10.38□□□□□ -0.75
GGA3-211ENST00000582232 TTC33Q6PID6 262 aaPredicted RBP10.38□□□□□ -0.75
GGA3-211ENST00000582232 LILRA2Q8N149 483 aa10.38□□□□□ -0.75
GGA3-211ENST00000582232 PQLC1Q8N2U9 271 aa10.38□□□□□ -0.75
GGA3-211ENST00000582232 LINC00471Q8N535 108 aa10.38□□□□□ -0.75
GGA3-211ENST00000582232 CISD2Q8N5K1 135 aaKnown RBP10.38□□□□□ -0.75
GGA3-211ENST00000582232 OR5M1Q8NGP8 315 aa10.38□□□□□ -0.75
GGA3-211ENST00000582232 OR6S1Q8NH40 331 aa10.38□□□□□ -0.75
GGA3-211ENST00000582232 TMEM239Q8WW34 195 aa10.38□□□□□ -0.75
GGA3-211ENST00000582232 LRTOMTQ8WZ04 291 aa10.38□□□□□ -0.75
GGA3-211ENST00000582232 SNRNP40Q96DI7 357 aaKnown RBP10.38□□□□□ -0.75
GGA3-211ENST00000582232 NRBF2Q96F24 287 aa10.38□□□□□ -0.75
GGA3-211ENST00000582232 CENPNQ96H22 339 aaPredicted RBP10.38□□□□□ -0.75
GGA3-211ENST00000582232 GPR137Q96N19 417 aa10.38□□□□□ -0.75
GGA3-211ENST00000582232 ALPK1Q96QP1 1244 aa10.38□□□□□ -0.75
GGA3-211ENST00000582232 SLX1AQ9BQ83 275 aa10.38□□□□□ -0.75
GGA3-211ENST00000582232 POTEKPQ9BYX7 375 aa10.38□□□□□ -0.75
GGA3-211ENST00000582232 SLC6A15Q9H2J7 730 aa10.38□□□□□ -0.75
GGA3-211ENST00000582232 VNN3Q9NY84 501 aa10.38□□□□□ -0.75
GGA3-211ENST00000582232 LUZP4Q9P127 313 aa10.38□□□□□ -0.75
GGA3-211ENST00000582232 LIPGQ9Y5X9 500 aa10.38□□□□□ -0.75
GGA3-211ENST00000582232 KALRNO60229 2985 aa10.38□□□□□ -0.75
GGA3-211ENST00000582232 A0A087WUU8 490 aa10.37□□□□□ -0.75
GGA3-211ENST00000582232 TRBV4-1A0A0J9YWV2 114 aa10.37□□□□□ -0.75
GGA3-211ENST00000582232 SH3PXD2BA1X283 911 aa10.37□□□□□ -0.75
GGA3-211ENST00000582232 OR14I1A6ND48 311 aa10.37□□□□□ -0.75
GGA3-211ENST00000582232 ARRDC5A6NEK1 342 aa10.37□□□□□ -0.75
GGA3-211ENST00000582232 GJE1A6NN92 205 aa10.37□□□□□ -0.75
GGA3-211ENST00000582232 NPIPA5E9PKD4 350 aa10.37□□□□□ -0.75
GGA3-211ENST00000582232 TNFRSF11BO00300 401 aa10.37□□□□□ -0.75
GGA3-211ENST00000582232 GNGT2O14610 69 aa10.37□□□□□ -0.75
GGA3-211ENST00000582232 CPN1P15169 458 aa10.37□□□□□ -0.75
GGA3-211ENST00000582232 ZNF708P17019 499 aa10.37□□□□□ -0.75
GGA3-211ENST00000582232 BMP7P18075 431 aa10.37□□□□□ -0.75
GGA3-211ENST00000582232 FPR1P21462 350 aa10.37□□□□□ -0.75
GGA3-211ENST00000582232 LHX2P50458 406 aa10.37□□□□□ -0.75
GGA3-211ENST00000582232 CTBP2P56545 445 aa10.37□□□□□ -0.75
GGA3-211ENST00000582232 CRYZQ08257 329 aaKnown RBP10.37□□□□□ -0.75
GGA3-211ENST00000582232 RCN1Q15293 331 aa10.37□□□□□ -0.75
GGA3-211ENST00000582232 SYT14P1Q58G82 188 aa10.37□□□□□ -0.75
GGA3-211ENST00000582232 DCST1Q5T197 706 aa10.37□□□□□ -0.75
GGA3-211ENST00000582232 ARHGAP11AQ6P4F7 1023 aa10.37□□□□□ -0.75
GGA3-211ENST00000582232 PODNL1Q6PEZ8 512 aa10.37□□□□□ -0.75
GGA3-211ENST00000582232 MBOAT2Q6ZWT7 520 aa10.37□□□□□ -0.75
GGA3-211ENST00000582232 GHDCQ8N2G8 530 aa10.37□□□□□ -0.75
GGA3-211ENST00000582232 TMEM255BQ8WV15 326 aa10.37□□□□□ -0.75
GGA3-211ENST00000582232 ABTB1Q969K4 478 aaPredicted RBP10.37□□□□□ -0.75
GGA3-211ENST00000582232 DDIT4LQ96D03 193 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms