RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 BARD1Q99728 777 aaKnown RBP12.26□□□□□ -0.45
CSNK1D-220ENST00000581737 FNDC11Q9BVV2 318 aa12.26□□□□□ -0.45
CSNK1D-220ENST00000581737 SLC38A1Q9H2H9 487 aa12.26□□□□□ -0.45
CSNK1D-220ENST00000581737 ANKRD19PQ9H560 264 aa12.26□□□□□ -0.45
CSNK1D-220ENST00000581737 ZNF703Q9H7S9 590 aaPredicted RBP12.26□□□□□ -0.45
CSNK1D-220ENST00000581737 SMURF2Q9HAU4 748 aa12.26□□□□□ -0.45
CSNK1D-220ENST00000581737 PAPOLBQ9NRJ5 636 aaKnown RBP12.26□□□□□ -0.45
CSNK1D-220ENST00000581737 FAM118AQ9NWS6 357 aa12.26□□□□□ -0.45
CSNK1D-220ENST00000581737 FLRT3Q9NZU0 649 aa12.26□□□□□ -0.45
CSNK1D-220ENST00000581737 MKLN1Q9UL63 735 aa12.26□□□□□ -0.45
CSNK1D-220ENST00000581737 IGLV3-32A0A0A0MS00 114 aa12.25□□□□□ -0.45
CSNK1D-220ENST00000581737 LOC100130705A0A1B0GUX0 176 aa12.25□□□□□ -0.45
CSNK1D-220ENST00000581737 PRAMEF27A3QJZ7 478 aa12.25□□□□□ -0.45
CSNK1D-220ENST00000581737 FAM166BA8MTA8 275 aa12.25□□□□□ -0.45
CSNK1D-220ENST00000581737 GNB5O14775 395 aa12.25□□□□□ -0.45
CSNK1D-220ENST00000581737 FCMRO60667 390 aa12.25□□□□□ -0.45
CSNK1D-220ENST00000581737 CBR3O75828 277 aa12.25□□□□□ -0.45
CSNK1D-220ENST00000581737 DIRAS1O95057 198 aa12.25□□□□□ -0.45
CSNK1D-220ENST00000581737 LGI1O95970 557 aa12.25□□□□□ -0.45
CSNK1D-220ENST00000581737 ADAP00813 363 aa12.25□□□□□ -0.45
CSNK1D-220ENST00000581737 GDF1P27539 372 aa12.25□□□□□ -0.45
CSNK1D-220ENST00000581737 MSX1P28360 303 aa12.25□□□□□ -0.45
CSNK1D-220ENST00000581737 RFC3P40938 356 aa12.25□□□□□ -0.45
CSNK1D-220ENST00000581737 OR1E2P47887 323 aa12.25□□□□□ -0.45
CSNK1D-220ENST00000581737 HMGA2P52926 109 aa12.25□□□□□ -0.45
CSNK1D-220ENST00000581737 IST1P53990 364 aa12.25□□□□□ -0.45
CSNK1D-220ENST00000581737 RIPPLY3P57055 190 aa12.25□□□□□ -0.45
CSNK1D-220ENST00000581737 RGS8P57771 180 aaPredicted RBP12.25□□□□□ -0.45
CSNK1D-220ENST00000581737 CHRNEQ04844 493 aa12.25□□□□□ -0.45
CSNK1D-220ENST00000581737 GANABQ14697 944 aaKnown RBP12.25□□□□□ -0.45
CSNK1D-220ENST00000581737 DUSP7Q16829 419 aa12.25□□□□□ -0.45
CSNK1D-220ENST00000581737 KRTCAP3Q53RY4 240 aa12.25□□□□□ -0.45
CSNK1D-220ENST00000581737 FGD3Q5JSP0 725 aa12.25□□□□□ -0.45
CSNK1D-220ENST00000581737 ZNF324BQ6AW86 544 aaPredicted RBP12.25□□□□□ -0.45
CSNK1D-220ENST00000581737 MARCH3Q86UD3 253 aa12.25□□□□□ -0.45
CSNK1D-220ENST00000581737 SIAH3Q8IW03 269 aa12.25□□□□□ -0.45
CSNK1D-220ENST00000581737 CMIPQ8IY22 773 aa12.25□□□□□ -0.45
CSNK1D-220ENST00000581737 OFCC1Q8IZS5 231 aa12.25□□□□□ -0.45
CSNK1D-220ENST00000581737 DEPDC4Q8N2C3 294 aa12.25□□□□□ -0.45
CSNK1D-220ENST00000581737 TMEM251Q8N6I4 163 aa12.25□□□□□ -0.45
CSNK1D-220ENST00000581737 ALPK1Q96QP1 1244 aa12.25□□□□□ -0.45
CSNK1D-220ENST00000581737 SLX1AQ9BQ83 275 aa12.25□□□□□ -0.45
CSNK1D-220ENST00000581737 AMBRA1Q9C0C7 1298 aa12.25□□□□□ -0.45
CSNK1D-220ENST00000581737 RIBC2Q9H4K1 309 aa12.25□□□□□ -0.45
CSNK1D-220ENST00000581737 PTGES2Q9H7Z7 377 aa12.25□□□□□ -0.45
CSNK1D-220ENST00000581737 ZDHHC11Q9H8X9 412 aa12.25□□□□□ -0.45
CSNK1D-220ENST00000581737 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.25□□□□□ -0.45
CSNK1D-220ENST00000581737 MGAT4BQ9UQ53 548 aa12.25□□□□□ -0.45
CSNK1D-220ENST00000581737 SLC35A3Q9Y2D2 325 aa12.25□□□□□ -0.45
CSNK1D-220ENST00000581737 GMPPBQ9Y5P6 360 aa12.25□□□□□ -0.45
CSNK1D-220ENST00000581737 NF1P21359 2839 aa12.24□□□□□ -0.45
CSNK1D-220ENST00000581737 NPIPA5A0A0B4J1W7 369 aa12.24□□□□□ -0.45
CSNK1D-220ENST00000581737 SERINC4A6NH21 518 aa12.24□□□□□ -0.45
CSNK1D-220ENST00000581737 AGAP5A6NIR3 686 aa12.24□□□□□ -0.45
CSNK1D-220ENST00000581737 FAM47E-STBD1D6RA91 191 aa12.24□□□□□ -0.45
CSNK1D-220ENST00000581737 NPIPA7E9PJI5 369 aa12.24□□□□□ -0.45
CSNK1D-220ENST00000581737 GTPBP1O00178 669 aaKnown RBP12.24□□□□□ -0.45
CSNK1D-220ENST00000581737 DLGAP1O14490 977 aa12.24□□□□□ -0.45
CSNK1D-220ENST00000581737 NPIPA8P0DM63 369 aa12.24□□□□□ -0.45
CSNK1D-220ENST00000581737 UBL4AP11441 157 aa12.24□□□□□ -0.45
CSNK1D-220ENST00000581737 EDN3P14138 238 aa12.24□□□□□ -0.45
CSNK1D-220ENST00000581737 IL7RP16871 459 aa12.24□□□□□ -0.45
CSNK1D-220ENST00000581737 RYKP34925 604 aa12.24□□□□□ -0.45
CSNK1D-220ENST00000581737 ADH7P40394 386 aa12.24□□□□□ -0.45
CSNK1D-220ENST00000581737 RPL5P46777 297 aaKnown RBP12.24□□□□□ -0.45
CSNK1D-220ENST00000581737 NR1H2P55055 460 aa12.24□□□□□ -0.45
CSNK1D-220ENST00000581737 SH3BGRP55822 239 aaPredicted RBP12.24□□□□□ -0.45
CSNK1D-220ENST00000581737 SUMO3P55854 103 aaPredicted RBP12.24□□□□□ -0.45
CSNK1D-220ENST00000581737 ESRRGP62508 458 aa12.24□□□□□ -0.45
CSNK1D-220ENST00000581737 CSNK2BP67870 215 aa12.24□□□□□ -0.45
CSNK1D-220ENST00000581737 EXOC3L2Q2M3D2 409 aa12.24□□□□□ -0.45
CSNK1D-220ENST00000581737 ZIK1Q3SY52 487 aaPredicted RBP12.24□□□□□ -0.45
CSNK1D-220ENST00000581737 RNFT1Q5M7Z0 435 aa12.24□□□□□ -0.45
CSNK1D-220ENST00000581737 PDZK1Q5T2W1 519 aa12.24□□□□□ -0.45
CSNK1D-220ENST00000581737 FNDC7Q5VTL7 733 aa12.24□□□□□ -0.45
CSNK1D-220ENST00000581737 TBPL2Q6SJ96 375 aa12.24□□□□□ -0.45
CSNK1D-220ENST00000581737 APOOLQ6UXV4 268 aa12.24□□□□□ -0.45
CSNK1D-220ENST00000581737 WDSUB1Q8N9V3 476 aa12.24□□□□□ -0.45
CSNK1D-220ENST00000581737 TSPAN14Q8NG11 270 aa12.24□□□□□ -0.45
CSNK1D-220ENST00000581737 VANGL1Q8TAA9 524 aaPredicted RBP12.24□□□□□ -0.45
CSNK1D-220ENST00000581737 PHOSPHO1Q8TCT1 267 aa12.24□□□□□ -0.45
CSNK1D-220ENST00000581737 DUSP19Q8WTR2 217 aa12.24□□□□□ -0.45
CSNK1D-220ENST00000581737 HDAC2Q92769 488 aaKnown RBP12.24□□□□□ -0.45
CSNK1D-220ENST00000581737 SLC38A4Q969I6 547 aa12.24□□□□□ -0.45
CSNK1D-220ENST00000581737 GPR137Q96N19 417 aa12.24□□□□□ -0.45
CSNK1D-220ENST00000581737 GNRHR2Q96P88 292 aa12.24□□□□□ -0.45
CSNK1D-220ENST00000581737 GABARAPL3Q9BY60 117 aa12.24□□□□□ -0.45
CSNK1D-220ENST00000581737 UBAP1Q9NZ09 502 aa12.24□□□□□ -0.45
CSNK1D-220ENST00000581737 ZNF443Q9Y2A4 671 aaPredicted RBP12.24□□□□□ -0.45
CSNK1D-220ENST00000581737 DNAJC13O75165 2243 aa12.23□□□□□ -0.45
CSNK1D-220ENST00000581737 SMIM31A0A1B0GVY4 71 aa12.23□□□□□ -0.45
CSNK1D-220ENST00000581737 C2orf72A6NCS6 295 aa12.23□□□□□ -0.45
CSNK1D-220ENST00000581737 NPIPA5E9PKD4 350 aa12.23□□□□□ -0.45
CSNK1D-220ENST00000581737 ZNF264O43296 627 aa12.23□□□□□ -0.45
CSNK1D-220ENST00000581737 LRRTM2O43300 516 aa12.23□□□□□ -0.45
CSNK1D-220ENST00000581737 HCRTR2O43614 444 aa12.23□□□□□ -0.45
CSNK1D-220ENST00000581737 MPZL2O60487 215 aa12.23□□□□□ -0.45
CSNK1D-220ENST00000581737 EIF4E2O60573 245 aaKnown RBP12.23□□□□□ -0.45
CSNK1D-220ENST00000581737 SMNDC1O75940 238 aaKnown RBP eCLIP12.23□□□□□ -0.45
CSNK1D-220ENST00000581737 GSTM3P21266 225 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms