RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 MED12LQ86YW9 2145 aa17.32■□□□□ 0.36
LIMD2-209ENST00000580222 FAM220BPB1ANY3 271 aa17.31■□□□□ 0.36
LIMD2-209ENST00000580222 SCDO00767 359 aa17.31■□□□□ 0.36
LIMD2-209ENST00000580222 HCRTR2O43614 444 aa17.31■□□□□ 0.36
LIMD2-209ENST00000580222 SCO2O43819 266 aa17.31■□□□□ 0.36
LIMD2-209ENST00000580222 GPRIN2O60269 458 aa17.31■□□□□ 0.36
LIMD2-209ENST00000580222 FCMRO60667 390 aa17.31■□□□□ 0.36
LIMD2-209ENST00000580222 OXSR1O95747 527 aaPredicted RBP17.31■□□□□ 0.36
LIMD2-209ENST00000580222 FAM157CP0CG43 387 aa17.31■□□□□ 0.36
LIMD2-209ENST00000580222 EEF1A1P68104 462 aaKnown RBP17.31■□□□□ 0.36
LIMD2-209ENST00000580222 SIRPAP78324 504 aa17.31■□□□□ 0.36
LIMD2-209ENST00000580222 CHRNEQ04844 493 aa17.31■□□□□ 0.36
LIMD2-209ENST00000580222 RBBP4Q09028 425 aa17.31■□□□□ 0.36
LIMD2-209ENST00000580222 EEF1A1P5Q5VTE0 462 aa17.31■□□□□ 0.36
LIMD2-209ENST00000580222 TYW3Q6IPR3 259 aaKnown RBP17.31■□□□□ 0.36
LIMD2-209ENST00000580222 TMEM81Q6P7N7 255 aa17.31■□□□□ 0.36
LIMD2-209ENST00000580222 IFNEQ86WN2 208 aa17.31■□□□□ 0.36
LIMD2-209ENST00000580222 PTOV1Q86YD1 416 aa17.31■□□□□ 0.36
LIMD2-209ENST00000580222 DEFB107AQ8IZN7 70 aa17.31■□□□□ 0.36
LIMD2-209ENST00000580222 METTL25Q8N6Q8 603 aa17.31■□□□□ 0.36
LIMD2-209ENST00000580222 ZNF527Q8NB42 609 aa17.31■□□□□ 0.36
LIMD2-209ENST00000580222 OR14L1PQ8NHC6 308 aa17.31■□□□□ 0.36
LIMD2-209ENST00000580222 BBS10Q8TAM1 723 aa17.31■□□□□ 0.36
LIMD2-209ENST00000580222 TBL1XR1Q9BZK7 514 aa17.31■□□□□ 0.36
LIMD2-209ENST00000580222 HOXD1Q9GZZ0 328 aa17.31■□□□□ 0.36
LIMD2-209ENST00000580222 SLC38A1Q9H2H9 487 aa17.31■□□□□ 0.36
LIMD2-209ENST00000580222 CACYBPQ9HB71 228 aaKnown RBP17.31■□□□□ 0.36
LIMD2-209ENST00000580222 UBQLN4Q9NRR5 601 aa17.31■□□□□ 0.36
LIMD2-209ENST00000580222 LAMP3Q9UQV4 416 aa17.31■□□□□ 0.36
LIMD2-209ENST00000580222 CR1P17927 2039 aa17.3■□□□□ 0.36
LIMD2-209ENST00000580222 HEATR5AQ86XA9 2040 aa17.3■□□□□ 0.36
LIMD2-209ENST00000580222 A8MV72 311 aaPredicted RBP17.3■□□□□ 0.36
LIMD2-209ENST00000580222 GUSBP08236 651 aa17.3■□□□□ 0.36
LIMD2-209ENST00000580222 CHMP24386 653 aa17.3■□□□□ 0.36
LIMD2-209ENST00000580222 ACVR1BP36896 505 aa17.3■□□□□ 0.36
LIMD2-209ENST00000580222 ATP12AP54707 1039 aa17.3■□□□□ 0.36
LIMD2-209ENST00000580222 LIPEQ05469 1076 aa17.3■□□□□ 0.36
LIMD2-209ENST00000580222 MAPK11Q15759 364 aa17.3■□□□□ 0.36
LIMD2-209ENST00000580222 VMACQ2NL98 169 aa17.3■□□□□ 0.36
LIMD2-209ENST00000580222 ERICH5Q6P6B1 374 aa17.3■□□□□ 0.36
LIMD2-209ENST00000580222 ENPP6Q6UWR7 440 aa17.3■□□□□ 0.36
LIMD2-209ENST00000580222 CALHM3Q86XJ0 350 aa17.3■□□□□ 0.36
LIMD2-209ENST00000580222 SLC30A8Q8IWU4 369 aa17.3■□□□□ 0.36
LIMD2-209ENST00000580222 ZNF611Q8N823 705 aa17.3■□□□□ 0.36
LIMD2-209ENST00000580222 HIPK4Q8NE63 616 aa17.3■□□□□ 0.36
LIMD2-209ENST00000580222 OR2T12Q8NG77 320 aa17.3■□□□□ 0.36
LIMD2-209ENST00000580222 OR4C3Q8NH37 302 aa17.3■□□□□ 0.36
LIMD2-209ENST00000580222 REXO5Q96IC2 774 aaKnown RBP17.3■□□□□ 0.36
LIMD2-209ENST00000580222 ALG2Q9H553 416 aa17.3■□□□□ 0.36
LIMD2-209ENST00000580222 ABCD2Q9UBJ2 740 aa17.3■□□□□ 0.36
LIMD2-209ENST00000580222 A0A0G2JPF8 293 aa17.29■□□□□ 0.36
LIMD2-209ENST00000580222 HNRNPCL2B2RXH8 293 aa17.29■□□□□ 0.36
LIMD2-209ENST00000580222 B4DXG7 233 aa17.29■□□□□ 0.36
LIMD2-209ENST00000580222 HNRNPCL3B7ZW38 293 aa17.29■□□□□ 0.36
LIMD2-209ENST00000580222 OVOL3O00110 214 aa17.29■□□□□ 0.36
LIMD2-209ENST00000580222 EBAG9O00559 213 aa17.29■□□□□ 0.36
LIMD2-209ENST00000580222 HS3ST1O14792 307 aa17.29■□□□□ 0.36
LIMD2-209ENST00000580222 FADS1O60427 444 aa17.29■□□□□ 0.36
LIMD2-209ENST00000580222 HNRNPCL1O60812 293 aaKnown RBP17.29■□□□□ 0.36
LIMD2-209ENST00000580222 NGFRP08138 427 aa17.29■□□□□ 0.36
LIMD2-209ENST00000580222 HNRNPCL4P0DMR1 293 aa17.29■□□□□ 0.36
LIMD2-209ENST00000580222 ZNF708P17019 499 aa17.29■□□□□ 0.36
LIMD2-209ENST00000580222 TBXA2RP21731 343 aa17.29■□□□□ 0.36
LIMD2-209ENST00000580222 PCGF2P35227 344 aa17.29■□□□□ 0.36
LIMD2-209ENST00000580222 GZMMP51124 257 aa17.29■□□□□ 0.36
LIMD2-209ENST00000580222 CLDN15P56746 228 aa17.29■□□□□ 0.36
LIMD2-209ENST00000580222 EEFSECP57772 596 aaKnown RBP17.29■□□□□ 0.36
LIMD2-209ENST00000580222 GABPB1Q06547 395 aaPredicted RBP17.29■□□□□ 0.36
LIMD2-209ENST00000580222 BNIP1Q12981 228 aa17.29■□□□□ 0.36
LIMD2-209ENST00000580222 SNTA1Q13424 505 aa17.29■□□□□ 0.36
LIMD2-209ENST00000580222 ADRM1Q16186 407 aa17.29■□□□□ 0.36
LIMD2-209ENST00000580222 PRAMEF8Q5VWM4 474 aa17.29■□□□□ 0.36
LIMD2-209ENST00000580222 PRAMEF7Q5VXH5 474 aa17.29■□□□□ 0.36
LIMD2-209ENST00000580222 REEP3Q6NUK4 255 aa17.29■□□□□ 0.36
LIMD2-209ENST00000580222 SLC30A6Q6NXT4 461 aa17.29■□□□□ 0.36
LIMD2-209ENST00000580222 HMGN2P46Q86SG4 172 aa17.29■□□□□ 0.36
LIMD2-209ENST00000580222 GATSQ8NAP1 163 aa17.29■□□□□ 0.36
LIMD2-209ENST00000580222 FIG4Q92562 907 aa17.29■□□□□ 0.36
LIMD2-209ENST00000580222 ZNF583Q96ND8 569 aa17.29■□□□□ 0.36
LIMD2-209ENST00000580222 TMEM204Q9BSN7 226 aa17.29■□□□□ 0.36
LIMD2-209ENST00000580222 SAP130Q9H0E3 1048 aa17.29■□□□□ 0.36
LIMD2-209ENST00000580222 QRSL1Q9H0R6 528 aaKnown RBP17.29■□□□□ 0.36
LIMD2-209ENST00000580222 ELOVL5Q9NYP7 299 aa17.29■□□□□ 0.36
LIMD2-209ENST00000580222 TMEM181Q9P2C4 612 aa17.29■□□□□ 0.36
LIMD2-209ENST00000580222 USP22Q9UPT9 525 aa17.29■□□□□ 0.36
LIMD2-209ENST00000580222 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.29■□□□□ 0.36
LIMD2-209ENST00000580222 DSPPQ9NZW4 1301 aa17.28■□□□□ 0.36
LIMD2-209ENST00000580222 H0YC42 278 aa17.28■□□□□ 0.36
LIMD2-209ENST00000580222 DNAJA2O60884 412 aa17.28■□□□□ 0.36
LIMD2-209ENST00000580222 NDUFS7O75251 213 aa17.28■□□□□ 0.36
LIMD2-209ENST00000580222 UGT2B17O75795 530 aa17.28■□□□□ 0.36
LIMD2-209ENST00000580222 CRHP06850 196 aa17.28■□□□□ 0.36
LIMD2-209ENST00000580222 TCEA1P23193 301 aaKnown RBP17.28■□□□□ 0.36
LIMD2-209ENST00000580222 AQP1P29972 269 aa17.28■□□□□ 0.36
LIMD2-209ENST00000580222 KCNJ5P48544 419 aa17.28■□□□□ 0.36
LIMD2-209ENST00000580222 GSK3BP49841 420 aa17.28■□□□□ 0.36
LIMD2-209ENST00000580222 RNF144AP50876 292 aaPredicted RBP17.28■□□□□ 0.36
LIMD2-209ENST00000580222 TPD52P55327 224 aaPredicted RBP17.28■□□□□ 0.36
LIMD2-209ENST00000580222 PDZK1Q5T2W1 519 aa17.28■□□□□ 0.36
LIMD2-209ENST00000580222 INTS11Q5TA45 600 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms