RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 PLPPR2Q96GM1 343 aa23.11■■□□□ 1.29
NPLOC4-215ENST00000574095 EBF4Q9BQW3 602 aa23.11■■□□□ 1.29
NPLOC4-215ENST00000574095 TCF7L2Q9NQB0 619 aa23.11■■□□□ 1.29
NPLOC4-215ENST00000574095 RLIMQ9NVW2 624 aa23.11■■□□□ 1.29
NPLOC4-215ENST00000574095 RAI1Q7Z5J4 1906 aaPredicted RBP23.11■■□□□ 1.29
NPLOC4-215ENST00000574095 DSCAMO60469 2012 aa23.1■■□□□ 1.29
NPLOC4-215ENST00000574095 TMED7-TICAM2A0A0A6YYA0 188 aa23.1■■□□□ 1.29
NPLOC4-215ENST00000574095 POLR3GO15318 223 aaPredicted RBP23.1■■□□□ 1.29
NPLOC4-215ENST00000574095 PLAUP00749 431 aa23.1■■□□□ 1.29
NPLOC4-215ENST00000574095 BCHEP06276 602 aa23.1■■□□□ 1.29
NPLOC4-215ENST00000574095 TFPTP0C1Z6 253 aa23.1■■□□□ 1.29
NPLOC4-215ENST00000574095 FPR1P21462 350 aa23.1■■□□□ 1.29
NPLOC4-215ENST00000574095 IL32P24001 234 aa23.1■■□□□ 1.29
NPLOC4-215ENST00000574095 HOXC12P31275 282 aa23.1■■□□□ 1.29
NPLOC4-215ENST00000574095 MAGEA8P43361 318 aa23.1■■□□□ 1.29
NPLOC4-215ENST00000574095 RIPPLY3P57055 190 aa23.1■■□□□ 1.29
NPLOC4-215ENST00000574095 NKX6-1P78426 367 aaPredicted RBP23.1■■□□□ 1.29
NPLOC4-215ENST00000574095 SLC2A7Q6PXP3 512 aa23.1■■□□□ 1.29
NPLOC4-215ENST00000574095 OR52P1PQ8NH57 321 aa23.1■■□□□ 1.29
NPLOC4-215ENST00000574095 SLC38A5Q8WUX1 472 aa23.1■■□□□ 1.29
NPLOC4-215ENST00000574095 GTF2H4Q92759 462 aa23.1■■□□□ 1.29
NPLOC4-215ENST00000574095 OSGIN1Q9UJX0 560 aa23.1■■□□□ 1.29
NPLOC4-215ENST00000574095 TMED7Q9Y3B3 224 aa23.1■■□□□ 1.29
NPLOC4-215ENST00000574095 HDGFL3Q9Y3E1 203 aa23.1■■□□□ 1.29
NPLOC4-215ENST00000574095 CFAP73A6NFT4 308 aa23.09■■□□□ 1.29
NPLOC4-215ENST00000574095 ZNF724A8MTY0 619 aa23.09■■□□□ 1.29
NPLOC4-215ENST00000574095 TGDSO95455 350 aa23.09■■□□□ 1.29
NPLOC4-215ENST00000574095 PMS2P2O95744 297 aa23.09■■□□□ 1.29
NPLOC4-215ENST00000574095 TACR3P29371 465 aa23.09■■□□□ 1.29
NPLOC4-215ENST00000574095 HTR3AP46098 478 aa23.09■■□□□ 1.29
NPLOC4-215ENST00000574095 STX1BP61266 288 aa23.09■■□□□ 1.29
NPLOC4-215ENST00000574095 EPS8Q12929 822 aa23.09■■□□□ 1.29
NPLOC4-215ENST00000574095 RPS26P11Q5JNZ5 115 aaPredicted RBP23.09■■□□□ 1.29
NPLOC4-215ENST00000574095 ZNF836Q6ZNA1 936 aa23.09■■□□□ 1.29
NPLOC4-215ENST00000574095 GALNT5Q7Z7M9 940 aa23.09■■□□□ 1.29
NPLOC4-215ENST00000574095 KRTAP1-3Q8IUG1 177 aa23.09■■□□□ 1.29
NPLOC4-215ENST00000574095 DYDC1Q8WWB3 177 aa23.09■■□□□ 1.29
NPLOC4-215ENST00000574095 PIGTQ969N2 578 aa23.09■■□□□ 1.29
NPLOC4-215ENST00000574095 ZHX1-C8orf76Q96EF9 292 aa23.09■■□□□ 1.29
NPLOC4-215ENST00000574095 PAIP1Q9H074 479 aaKnown RBP23.09■■□□□ 1.29
NPLOC4-215ENST00000574095 CALML5Q9NZT1 146 aa23.09■■□□□ 1.29
NPLOC4-215ENST00000574095 PCDHB14Q9Y5E9 798 aa23.09■■□□□ 1.29
NPLOC4-215ENST00000574095 TMEM72A0PK05 275 aa23.08■■□□□ 1.29
NPLOC4-215ENST00000574095 GKN3PP0CG01 181 aa23.08■■□□□ 1.29
NPLOC4-215ENST00000574095 FKBP2P26885 142 aaKnown RBP23.08■■□□□ 1.29
NPLOC4-215ENST00000574095 CLK1P49759 484 aaKnown RBP23.08■■□□□ 1.29
NPLOC4-215ENST00000574095 POLR2HP52434 150 aaKnown RBP23.08■■□□□ 1.29
NPLOC4-215ENST00000574095 CRISP3P54108 245 aa23.08■■□□□ 1.29
NPLOC4-215ENST00000574095 OR2B6P58173 313 aa23.08■■□□□ 1.29
NPLOC4-215ENST00000574095 ITGADQ13349 1161 aa23.08■■□□□ 1.29
NPLOC4-215ENST00000574095 P2RY6Q15077 328 aa23.08■■□□□ 1.29
NPLOC4-215ENST00000574095 ABLIM2Q6H8Q1 611 aa23.08■■□□□ 1.29
NPLOC4-215ENST00000574095 ZNF704Q6ZNC4 412 aaPredicted RBP23.08■■□□□ 1.29
NPLOC4-215ENST00000574095 Q6ZT83 130 aa23.08■■□□□ 1.29
NPLOC4-215ENST00000574095 KISS1RQ969F8 398 aaPredicted RBP23.08■■□□□ 1.29
NPLOC4-215ENST00000574095 TMEM19Q96HH6 336 aa23.08■■□□□ 1.29
NPLOC4-215ENST00000574095 CCL19Q99731 98 aa23.08■■□□□ 1.29
NPLOC4-215ENST00000574095 DSPPQ9NZW4 1301 aa23.08■■□□□ 1.28
NPLOC4-215ENST00000574095 CDHR4A6H8M9 788 aa23.07■■□□□ 1.28
NPLOC4-215ENST00000574095 ZNF716A6NP11 495 aa23.07■■□□□ 1.28
NPLOC4-215ENST00000574095 SMPD2O60906 423 aa23.07■■□□□ 1.28
NPLOC4-215ENST00000574095 NUDT7P0C024 238 aa23.07■■□□□ 1.28
NPLOC4-215ENST00000574095 SLC1A3P43003 542 aa23.07■■□□□ 1.28
NPLOC4-215ENST00000574095 NR1H2P55055 460 aa23.07■■□□□ 1.28
NPLOC4-215ENST00000574095 TAB1Q15750 504 aa23.07■■□□□ 1.28
NPLOC4-215ENST00000574095 C20orf204Q6ZNR8 217 aa23.07■■□□□ 1.28
NPLOC4-215ENST00000574095 BHLHA15Q7RTS1 189 aaPredicted RBP23.07■■□□□ 1.28
NPLOC4-215ENST00000574095 FUNDC1Q8IVP5 155 aa23.07■■□□□ 1.28
NPLOC4-215ENST00000574095 CCDC103Q8IW40 242 aa23.07■■□□□ 1.28
NPLOC4-215ENST00000574095 ZNF100Q8IYN0 542 aa23.07■■□□□ 1.28
NPLOC4-215ENST00000574095 PIP5K1AQ99755 562 aa23.07■■□□□ 1.28
NPLOC4-215ENST00000574095 CCDC28BQ9BUN5 200 aa23.07■■□□□ 1.28
NPLOC4-215ENST00000574095 TMEM181Q9P2C4 612 aa23.07■■□□□ 1.28
NPLOC4-215ENST00000574095 ACANP16112 2415 aa23.06■■□□□ 1.28
NPLOC4-215ENST00000574095 CLIC1O00299 241 aa23.06■■□□□ 1.28
NPLOC4-215ENST00000574095 FAAHO00519 579 aa23.06■■□□□ 1.28
NPLOC4-215ENST00000574095 RAMP1O60894 148 aa23.06■■□□□ 1.28
NPLOC4-215ENST00000574095 LYZL6O75951 148 aa23.06■■□□□ 1.28
NPLOC4-215ENST00000574095 UQCRBP14927 111 aa23.06■■□□□ 1.28
NPLOC4-215ENST00000574095 MRPL19P49406 292 aaKnown RBP23.06■■□□□ 1.28
NPLOC4-215ENST00000574095 AQP5P55064 265 aa23.06■■□□□ 1.28
NPLOC4-215ENST00000574095 PDK3Q15120 406 aa23.06■■□□□ 1.28
NPLOC4-215ENST00000574095 RGNQ15493 299 aa23.06■■□□□ 1.28
NPLOC4-215ENST00000574095 LIN52Q52LA3 116 aa23.06■■□□□ 1.28
NPLOC4-215ENST00000574095 ZNF440Q8IYI8 595 aa23.06■■□□□ 1.28
NPLOC4-215ENST00000574095 DDIT4LQ96D03 193 aa23.06■■□□□ 1.28
NPLOC4-215ENST00000574095 DLL4Q9NR61 685 aa23.06■■□□□ 1.28
NPLOC4-215ENST00000574095 CCDC167Q9P0B6 97 aa23.06■■□□□ 1.28
NPLOC4-215ENST00000574095 EMC3Q9P0I2 261 aa23.06■■□□□ 1.28
NPLOC4-215ENST00000574095 TRAPPC4Q9Y296 219 aa23.06■■□□□ 1.28
NPLOC4-215ENST00000574095 ZNF443Q9Y2A4 671 aaPredicted RBP23.06■■□□□ 1.28
NPLOC4-215ENST00000574095 ROS1P08922 2347 aa23.05■■□□□ 1.28
NPLOC4-215ENST00000574095 IGKV3D-15A0A087WSY6 115 aa23.05■■□□□ 1.28
NPLOC4-215ENST00000574095 A0A0G2JPF8 293 aa23.05■■□□□ 1.28
NPLOC4-215ENST00000574095 ZC3H12DA2A288 527 aaKnown RBP23.05■■□□□ 1.28
NPLOC4-215ENST00000574095 HNRNPCL2B2RXH8 293 aa23.05■■□□□ 1.28
NPLOC4-215ENST00000574095 HNRNPCL3B7ZW38 293 aa23.05■■□□□ 1.28
NPLOC4-215ENST00000574095 ZNF208O43345 1280 aa23.05■■□□□ 1.28
NPLOC4-215ENST00000574095 HNRNPCL1O60812 293 aaKnown RBP23.05■■□□□ 1.28
NPLOC4-215ENST00000574095 HNRNPCL4P0DMR1 293 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms