RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 SLC17A9Q9BYT1 436 aa17.58■□□□□ 0.4
SCARF1-206ENST00000573852 MCCC2Q9HCC0 563 aa17.58■□□□□ 0.4
SCARF1-206ENST00000573852 DUSP22Q9NRW4 184 aa17.58■□□□□ 0.4
SCARF1-206ENST00000573852 MRPL15Q9P015 296 aaKnown RBP17.58■□□□□ 0.4
SCARF1-206ENST00000573852 SATB2Q9UPW6 733 aa17.58■□□□□ 0.4
SCARF1-206ENST00000573852 A0A0C4DFX4 3053 aa17.58■□□□□ 0.4
SCARF1-206ENST00000573852 KCNJ13O60928 360 aa17.57■□□□□ 0.4
SCARF1-206ENST00000573852 ADAM11O75078 769 aa17.57■□□□□ 0.4
SCARF1-206ENST00000573852 MPC2O95563 127 aa17.57■□□□□ 0.4
SCARF1-206ENST00000573852 ZP1P60852 638 aa17.57■□□□□ 0.4
SCARF1-206ENST00000573852 RPS21P63220 83 aaKnown RBP17.57■□□□□ 0.4
SCARF1-206ENST00000573852 CDK5R1Q15078 307 aa17.57■□□□□ 0.4
SCARF1-206ENST00000573852 CMIPQ8IY22 773 aa17.57■□□□□ 0.4
SCARF1-206ENST00000573852 PCNPQ8WW12 178 aaKnown RBP17.57■□□□□ 0.4
SCARF1-206ENST00000573852 SMIM19Q96E16 107 aa17.57■□□□□ 0.4
SCARF1-206ENST00000573852 OR14A2Q96R54 314 aa17.57■□□□□ 0.4
SCARF1-206ENST00000573852 TMEM27Q9HBJ8 222 aa17.57■□□□□ 0.4
SCARF1-206ENST00000573852 MRPS2Q9Y399 296 aaKnown RBP17.57■□□□□ 0.4
SCARF1-206ENST00000573852 RNF215Q9Y6U7 377 aa17.57■□□□□ 0.4
SCARF1-206ENST00000573852 FGF17O60258 216 aa17.57■□□□□ 0.4
SCARF1-206ENST00000573852 SERPINA3P01011 423 aa17.57■□□□□ 0.4
SCARF1-206ENST00000573852 AK4P27144 223 aaPredicted RBP17.57■□□□□ 0.4
SCARF1-206ENST00000573852 RAG2P55895 527 aa17.57■□□□□ 0.4
SCARF1-206ENST00000573852 PRSS41Q7RTY9 318 aa17.57■□□□□ 0.4
SCARF1-206ENST00000573852 PIAS4Q8N2W9 510 aaPredicted RBP17.57■□□□□ 0.4
SCARF1-206ENST00000573852 CDRT4Q8N9R6 151 aa17.57■□□□□ 0.4
SCARF1-206ENST00000573852 SDR9C7Q8NEX9 313 aa17.57■□□□□ 0.4
SCARF1-206ENST00000573852 OR52E2Q8NGJ4 325 aa17.57■□□□□ 0.4
SCARF1-206ENST00000573852 RPLP0P6Q8NHW5 317 aa17.57■□□□□ 0.4
SCARF1-206ENST00000573852 LGALS14Q8TCE9 139 aa17.57■□□□□ 0.4
SCARF1-206ENST00000573852 ORAI1Q96D31 301 aa17.57■□□□□ 0.4
SCARF1-206ENST00000573852 NKIRAS2Q9NYR9 191 aa17.57■□□□□ 0.4
SCARF1-206ENST00000573852 SPATA2Q9UM82 520 aa17.57■□□□□ 0.4
SCARF1-206ENST00000573852 HEBP2Q9Y5Z4 205 aa17.57■□□□□ 0.4
SCARF1-206ENST00000573852 A0A0B4J2E0 115 aa17.56■□□□□ 0.4
SCARF1-206ENST00000573852 LOC105371267A0A1B0GV96 52 aa17.56■□□□□ 0.4
SCARF1-206ENST00000573852 A0A1B0GWA3 101 aa17.56■□□□□ 0.4
SCARF1-206ENST00000573852 A0A1B0GX12 115 aa17.56■□□□□ 0.4
SCARF1-206ENST00000573852 GSTZ1O43708 216 aaPredicted RBP17.56■□□□□ 0.4
SCARF1-206ENST00000573852 SSNA1O43805 119 aa17.56■□□□□ 0.4
SCARF1-206ENST00000573852 UCHL1P09936 223 aa17.56■□□□□ 0.4
SCARF1-206ENST00000573852 NAT1P18440 290 aa17.56■□□□□ 0.4
SCARF1-206ENST00000573852 DNASE1P24855 282 aa17.56■□□□□ 0.4
SCARF1-206ENST00000573852 GABRA3P34903 492 aa17.56■□□□□ 0.4
SCARF1-206ENST00000573852 GDNFP39905 211 aa17.56■□□□□ 0.4
SCARF1-206ENST00000573852 NAA10P41227 235 aaPredicted RBP17.56■□□□□ 0.4
SCARF1-206ENST00000573852 ZNF81P51508 661 aa17.56■□□□□ 0.4
SCARF1-206ENST00000573852 IKZF1Q13422 519 aa17.56■□□□□ 0.4
SCARF1-206ENST00000573852 ZNF613Q6PF04 617 aa17.56■□□□□ 0.4
SCARF1-206ENST00000573852 RTL4Q6ZR62 310 aa17.56■□□□□ 0.4
SCARF1-206ENST00000573852 CMTM4Q8IZR5 234 aa17.56■□□□□ 0.4
SCARF1-206ENST00000573852 OR4K13Q8NH42 304 aa17.56■□□□□ 0.4
SCARF1-206ENST00000573852 FLVCR1-AS1Q8TAF5 88 aa17.56■□□□□ 0.4
SCARF1-206ENST00000573852 ERMAPQ96PL5 475 aaPredicted RBP17.56■□□□□ 0.4
SCARF1-206ENST00000573852 CDCP1Q9H5V8 836 aa17.56■□□□□ 0.4
SCARF1-206ENST00000573852 PCDHGA9Q9Y5G4 932 aaKnown RBP17.56■□□□□ 0.4
SCARF1-206ENST00000573852 A0A1B0GVI7 797 aa17.56■□□□□ 0.4
SCARF1-206ENST00000573852 ADH1BP00325 375 aa17.56■□□□□ 0.4
SCARF1-206ENST00000573852 CT62P0C5K7 136 aa17.56■□□□□ 0.4
SCARF1-206ENST00000573852 UGT2B7P16662 529 aa17.56■□□□□ 0.4
SCARF1-206ENST00000573852 POU4F2Q12837 409 aa17.56■□□□□ 0.4
SCARF1-206ENST00000573852 HSD17B12Q53GQ0 312 aa17.56■□□□□ 0.4
SCARF1-206ENST00000573852 OR56B4Q8NH76 319 aa17.56■□□□□ 0.4
SCARF1-206ENST00000573852 OR14C36Q8NHC7 312 aa17.56■□□□□ 0.4
SCARF1-206ENST00000573852 SP7Q8TDD2 431 aaPredicted RBP17.56■□□□□ 0.4
SCARF1-206ENST00000573852 SMIM4Q8WVI0 70 aa17.56■□□□□ 0.4
SCARF1-206ENST00000573852 GCDHQ92947 438 aaPredicted RBP17.56■□□□□ 0.4
SCARF1-206ENST00000573852 MARVELD3Q96A59 401 aa17.56■□□□□ 0.4
SCARF1-206ENST00000573852 PAWRQ96IZ0 340 aaKnown RBP17.56■□□□□ 0.4
SCARF1-206ENST00000573852 DERL3Q96Q80 235 aa17.56■□□□□ 0.4
SCARF1-206ENST00000573852 PDCD1LG2Q9BQ51 273 aa17.56■□□□□ 0.4
SCARF1-206ENST00000573852 ZNF559Q9BR84 538 aa17.56■□□□□ 0.4
SCARF1-206ENST00000573852 C7orf50Q9BRJ6 194 aaKnown RBP17.56■□□□□ 0.4
SCARF1-206ENST00000573852 SRMSQ9H3Y6 488 aa17.56■□□□□ 0.4
SCARF1-206ENST00000573852 FLVCR2Q9UPI3 526 aa17.56■□□□□ 0.4
SCARF1-206ENST00000573852 BRINP1O60477 761 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 ARL6IP5O75915 188 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 PDGFAP04085 211 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 VSX2P58304 361 aaPredicted RBP17.55■□□□□ 0.4
SCARF1-206ENST00000573852 SIRPAP78324 504 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 DYRK1AQ13627 763 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 EXOSC2Q13868 293 aaKnown RBP17.55■□□□□ 0.4
SCARF1-206ENST00000573852 WDR45BQ5MNZ6 344 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 SLC22A10Q63ZE4 541 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 GPR139Q6DWJ6 353 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 SFRP4Q6FHJ7 346 aaPredicted RBP17.55■□□□□ 0.4
SCARF1-206ENST00000573852 TANGO2Q6ICL3 276 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 ZC3H14Q6PJT7 736 aaKnown RBP17.55■□□□□ 0.4
SCARF1-206ENST00000573852 ZNF614Q8N883 585 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 ZNF671Q8TAW3 534 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 CAPN10Q9HC96 672 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 BAIAP2Q9UQB8 552 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 CIB4A0PJX0 185 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 G3V3Q6 166 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 SLC31A1O15431 190 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 GMDSO60547 372 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 HIST1H1CP16403 213 aaKnown RBP17.55■□□□□ 0.4
SCARF1-206ENST00000573852 SLC6A6P31641 620 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 CAPZA2P47755 286 aa17.55■□□□□ 0.4
SCARF1-206ENST00000573852 SELENOPP49908 381 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms