RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 ARHGAP24Q8N264 748 aa12.17□□□□□ -0.46
RPAIN-213ENST00000573577 CADM2Q8N3J6 435 aa12.17□□□□□ -0.46
RPAIN-213ENST00000573577 NAXEQ8NCW5 288 aa12.17□□□□□ -0.46
RPAIN-213ENST00000573577 MBD3L2Q8NHZ7 208 aaPredicted RBP12.17□□□□□ -0.46
RPAIN-213ENST00000573577 FIG4Q92562 907 aa12.17□□□□□ -0.46
RPAIN-213ENST00000573577 KLHL15Q96M94 604 aa12.17□□□□□ -0.46
RPAIN-213ENST00000573577 UCN2Q96RP3 112 aa12.17□□□□□ -0.46
RPAIN-213ENST00000573577 CDRT15Q96T59 188 aa12.17□□□□□ -0.46
RPAIN-213ENST00000573577 NPAS1Q99742 590 aa12.17□□□□□ -0.46
RPAIN-213ENST00000573577 ZNF559Q9BR84 538 aa12.17□□□□□ -0.46
RPAIN-213ENST00000573577 TRIM2Q9C040 744 aa12.17□□□□□ -0.46
RPAIN-213ENST00000573577 TMEM185BQ9H7F4 350 aa12.17□□□□□ -0.46
RPAIN-213ENST00000573577 TIGARQ9NQ88 270 aa12.17□□□□□ -0.46
RPAIN-213ENST00000573577 SELENONQ9NZV5 590 aa12.17□□□□□ -0.46
RPAIN-213ENST00000573577 CHRNA9Q9UGM1 479 aa12.17□□□□□ -0.46
RPAIN-213ENST00000573577 USP22Q9UPT9 525 aa12.17□□□□□ -0.46
RPAIN-213ENST00000573577 CENPEQ02224 2701 aa12.17□□□□□ -0.46
RPAIN-213ENST00000573577 ADGRG4Q8IZF6 3080 aa12.17□□□□□ -0.46
RPAIN-213ENST00000573577 MAST4O15021 2626 aa12.16□□□□□ -0.46
RPAIN-213ENST00000573577 CLCA1A8K7I4 914 aa12.16□□□□□ -0.46
RPAIN-213ENST00000573577 CXCR6O00574 342 aa12.16□□□□□ -0.46
RPAIN-213ENST00000573577 ADAMDEC1O15204 470 aa12.16□□□□□ -0.46
RPAIN-213ENST00000573577 FRS3O43559 492 aa12.16□□□□□ -0.46
RPAIN-213ENST00000573577 IL2RAP01589 272 aa12.16□□□□□ -0.46
RPAIN-213ENST00000573577 FESP07332 822 aa12.16□□□□□ -0.46
RPAIN-213ENST00000573577 HSD17B1P14061 328 aa12.16□□□□□ -0.46
RPAIN-213ENST00000573577 CXCR1P25024 350 aa12.16□□□□□ -0.46
RPAIN-213ENST00000573577 TACR3P29371 465 aa12.16□□□□□ -0.46
RPAIN-213ENST00000573577 EIF1AXP47813 144 aaKnown RBP12.16□□□□□ -0.46
RPAIN-213ENST00000573577 CLK1P49759 484 aaKnown RBP12.16□□□□□ -0.46
RPAIN-213ENST00000573577 SUCLG1P53597 346 aaKnown RBP12.16□□□□□ -0.46
RPAIN-213ENST00000573577 PRSS12P56730 875 aa12.16□□□□□ -0.46
RPAIN-213ENST00000573577 CLDN15P56746 228 aa12.16□□□□□ -0.46
RPAIN-213ENST00000573577 CLDN20P56880 219 aa12.16□□□□□ -0.46
RPAIN-213ENST00000573577 SLC25A35Q3KQZ1 300 aa12.16□□□□□ -0.46
RPAIN-213ENST00000573577 TMEM176BQ3YBM2 270 aaPredicted RBP12.16□□□□□ -0.46
RPAIN-213ENST00000573577 GLIPR1L2Q4G1C9 344 aa12.16□□□□□ -0.46
RPAIN-213ENST00000573577 HBMQ6B0K9 141 aa12.16□□□□□ -0.46
RPAIN-213ENST00000573577 POMZP3Q6PJE2 187 aa12.16□□□□□ -0.46
RPAIN-213ENST00000573577 GGNQ86UU5 652 aa12.16□□□□□ -0.46
RPAIN-213ENST00000573577 LIX1LQ8IVB5 337 aa12.16□□□□□ -0.46
RPAIN-213ENST00000573577 LSMEM1Q8N8F7 131 aa12.16□□□□□ -0.46
RPAIN-213ENST00000573577 RBM15BQ8NDT2 890 aaKnown RBP12.16□□□□□ -0.46
RPAIN-213ENST00000573577 ATP6V1C2Q8NEY4 427 aa12.16□□□□□ -0.46
RPAIN-213ENST00000573577 OR52E4Q8NGH9 312 aa12.16□□□□□ -0.46
RPAIN-213ENST00000573577 OR2V1Q8NHB1 315 aa12.16□□□□□ -0.46
RPAIN-213ENST00000573577 DNAJA4Q8WW22 397 aaPredicted RBP12.16□□□□□ -0.46
RPAIN-213ENST00000573577 WNT2BQ93097 391 aa12.16□□□□□ -0.46
RPAIN-213ENST00000573577 FAM162AQ96A26 154 aa12.16□□□□□ -0.46
RPAIN-213ENST00000573577 DDIT4LQ96D03 193 aa12.16□□□□□ -0.46
RPAIN-213ENST00000573577 TM9SF2Q99805 663 aa12.16□□□□□ -0.46
RPAIN-213ENST00000573577 ADAM19Q9H013 955 aa12.16□□□□□ -0.46
RPAIN-213ENST00000573577 C1orf21Q9H246 121 aa12.16□□□□□ -0.46
RPAIN-213ENST00000573577 TMEM27Q9HBJ8 222 aa12.16□□□□□ -0.46
RPAIN-213ENST00000573577 CTPS2Q9NRF8 586 aa12.16□□□□□ -0.46
RPAIN-213ENST00000573577 ADPRHL2Q9NX46 363 aa12.16□□□□□ -0.46
RPAIN-213ENST00000573577 CLCF1Q9UBD9 225 aa12.16□□□□□ -0.46
RPAIN-213ENST00000573577 MCTS1Q9ULC4 181 aaKnown RBP12.16□□□□□ -0.46
RPAIN-213ENST00000573577 ZNF175Q9Y473 711 aa12.16□□□□□ -0.46
RPAIN-213ENST00000573577 MED12Q93074 2177 aa12.16□□□□□ -0.46
RPAIN-213ENST00000573577 CACNA1CQ13936 2221 aa12.15□□□□□ -0.46
RPAIN-213ENST00000573577 TMED7-TICAM2A0A0A6YYA0 188 aa12.15□□□□□ -0.46
RPAIN-213ENST00000573577 SLC22A20A6NK97 555 aa12.15□□□□□ -0.46
RPAIN-213ENST00000573577 DVL2O14641 736 aa12.15□□□□□ -0.46
RPAIN-213ENST00000573577 TNFSF11O14788 317 aa12.15□□□□□ -0.46
RPAIN-213ENST00000573577 ZNF208O43345 1280 aa12.15□□□□□ -0.46
RPAIN-213ENST00000573577 EFNA2O43921 213 aa12.15□□□□□ -0.46
RPAIN-213ENST00000573577 FMO6PO60774 539 aa12.15□□□□□ -0.46
RPAIN-213ENST00000573577 SYNGR4O95473 234 aa12.15□□□□□ -0.46
RPAIN-213ENST00000573577 T-ENOLP0DO92 83 aa12.15□□□□□ -0.46
RPAIN-213ENST00000573577 FCGR2AP12318 317 aa12.15□□□□□ -0.46
RPAIN-213ENST00000573577 PRG2P13727 222 aa12.15□□□□□ -0.46
RPAIN-213ENST00000573577 GGT1P19440 569 aa12.15□□□□□ -0.46
RPAIN-213ENST00000573577 IL11P20809 199 aa12.15□□□□□ -0.46
RPAIN-213ENST00000573577 CD247P20963 164 aa12.15□□□□□ -0.46
RPAIN-213ENST00000573577 CARD18P57730 90 aa12.15□□□□□ -0.46
RPAIN-213ENST00000573577 NRF1Q16656 503 aa12.15□□□□□ -0.46
RPAIN-213ENST00000573577 CYBRD1Q53TN4 286 aa12.15□□□□□ -0.46
RPAIN-213ENST00000573577 SYT14P1Q58G82 188 aa12.15□□□□□ -0.46
RPAIN-213ENST00000573577 P4HA3Q7Z4N8 544 aa12.15□□□□□ -0.46
RPAIN-213ENST00000573577 ADGRG3Q86Y34 549 aa12.15□□□□□ -0.46
RPAIN-213ENST00000573577 C9orf106Q8NAJ2 232 aa12.15□□□□□ -0.46
RPAIN-213ENST00000573577 ACBD4Q8NC06 268 aa12.15□□□□□ -0.46
RPAIN-213ENST00000573577 GPR32P1Q8NGA4 272 aa12.15□□□□□ -0.46
RPAIN-213ENST00000573577 OR10D3Q8NH80 312 aa12.15□□□□□ -0.46
RPAIN-213ENST00000573577 ZNF524Q96C55 264 aa12.15□□□□□ -0.46
RPAIN-213ENST00000573577 ADGRG7Q96K78 797 aa12.15□□□□□ -0.46
RPAIN-213ENST00000573577 ZFP3Q96NJ6 502 aa12.15□□□□□ -0.46
RPAIN-213ENST00000573577 ARHGDIGQ99819 225 aa12.15□□□□□ -0.46
RPAIN-213ENST00000573577 SPOCK3Q9BQ16 436 aa12.15□□□□□ -0.46
RPAIN-213ENST00000573577 ENKD1Q9H0I2 346 aa12.15□□□□□ -0.46
RPAIN-213ENST00000573577 C12orf10Q9HB07 376 aa12.15□□□□□ -0.46
RPAIN-213ENST00000573577 ZNF629Q9UEG4 869 aaPredicted RBP12.15□□□□□ -0.46
RPAIN-213ENST00000573577 OSGIN1Q9UJX0 560 aa12.15□□□□□ -0.46
RPAIN-213ENST00000573577 TMED7Q9Y3B3 224 aa12.15□□□□□ -0.46
RPAIN-213ENST00000573577 A0A0J9YW62 118 aa12.14□□□□□ -0.47
RPAIN-213ENST00000573577 H0YC42 278 aa12.14□□□□□ -0.47
RPAIN-213ENST00000573577 UBOX5O94941 541 aa12.14□□□□□ -0.47
RPAIN-213ENST00000573577 OPN1LWP04000 364 aa12.14□□□□□ -0.47
RPAIN-213ENST00000573577 TFPIP10646 304 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms