RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 OR10A5Q9H207 317 aa6□□□□□ -1.45
CHD3-213ENST00000571249 MRPL46Q9H2W6 279 aaKnown RBP6□□□□□ -1.45
CHD3-213ENST00000571249 DSN1Q9H410 356 aa6□□□□□ -1.45
CHD3-213ENST00000571249 RPF2Q9H7B2 306 aaKnown RBP6□□□□□ -1.45
CHD3-213ENST00000571249 ZMAT3Q9HA38 289 aaKnown RBP6□□□□□ -1.45
CHD3-213ENST00000571249 G6PC2Q9NQR9 355 aa6□□□□□ -1.45
CHD3-213ENST00000571249 FBXO6Q9NRD1 293 aaPredicted RBP6□□□□□ -1.45
CHD3-213ENST00000571249 TREM2Q9NZC2 230 aa6□□□□□ -1.45
CHD3-213ENST00000571249 CORO2BQ9UQ03 480 aa6□□□□□ -1.45
CHD3-213ENST00000571249 DHRS7Q9Y394 339 aa6□□□□□ -1.45
CHD3-213ENST00000571249 CAPN7Q9Y6W3 813 aa6□□□□□ -1.45
CHD3-213ENST00000571249 A0A0G2JND7 137 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 RTCAO00442 366 aaKnown RBP5.99□□□□□ -1.45
CHD3-213ENST00000571249 CXCL13O43927 109 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 MGRN1O60291 552 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 CCDC22O60826 627 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 PRKRAO75569 313 aaKnown RBP5.99□□□□□ -1.45
CHD3-213ENST00000571249 GAAP10253 952 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 NQO1P15559 274 aaKnown RBP5.99□□□□□ -1.45
CHD3-213ENST00000571249 GGT1P19440 569 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 GPX3P22352 226 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 ATP5F1P24539 256 aaPredicted RBP5.99□□□□□ -1.45
CHD3-213ENST00000571249 ATP5A1P25705 553 aaKnown RBP5.99□□□□□ -1.45
CHD3-213ENST00000571249 PTX3P26022 381 aaPredicted RBP5.99□□□□□ -1.45
CHD3-213ENST00000571249 RASSF2P50749 326 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 SLC12A2P55011 1212 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 CDKN2DP55273 166 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 NAA20P61599 178 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 CHRNEQ04844 493 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 CD69Q07108 199 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 TGM3Q08188 693 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 RASGEF1BQ0VAM2 473 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 SP140Q13342 867 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 RIN1Q13671 783 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 PPP1R3AQ16821 1122 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 MBNL2Q5VZF2 373 aaKnown RBP5.99□□□□□ -1.45
CHD3-213ENST00000571249 ADNP2Q6IQ32 1131 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 EPGNQ6UW88 154 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 TMIGD1Q6UXZ0 262 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 ZCCHC23Q6ZST2 131 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 ESPNLQ6ZVH7 1005 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 RAPH1Q70E73 1250 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 SSX8Q7RTT4 187 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 THOC6Q86W42 341 aaKnown RBP5.99□□□□□ -1.45
CHD3-213ENST00000571249 TUSC5Q8IXB3 177 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 C10orf67Q8IYJ2 551 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 KIRREL3Q8IZU9 778 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 ZNF786Q8N393 782 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 C17orf47Q8NEP4 570 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 TOR1AIP2Q8NFQ8 470 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 CLDND2Q8NHS1 167 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 RHEBL1Q8TAI7 183 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 EEF1AKMT1Q8WVE0 214 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 WDR60Q8WVS4 1066 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 KCNJ9Q92806 393 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 TANKQ92844 425 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 TMCO6Q96DC7 493 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 L3HYPDHQ96EM0 354 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 PTCD3Q96EY7 689 aaKnown RBP5.99□□□□□ -1.45
CHD3-213ENST00000571249 APIPQ96GX9 242 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 NSL1Q96IY1 281 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 C1QTNF6Q9BXI9 259 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 ROGDIQ9GZN7 287 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 RAB1BQ9H0U4 201 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 FKRPQ9H9S5 495 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 BEX1Q9HBH7 125 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 SLC52A3Q9NQ40 469 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 RAP2CQ9Y3L5 183 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 TSC22D4Q9Y3Q8 395 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 SOX21Q9Y651 276 aaPredicted RBP5.99□□□□□ -1.45
CHD3-213ENST00000571249 AP4B1Q9Y6B7 739 aa5.99□□□□□ -1.45
CHD3-213ENST00000571249 HUWE1Q7Z6Z7 4374 aaKnown RBP5.99□□□□□ -1.45
CHD3-213ENST00000571249 ARHGAP32A7KAX9 2087 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 HEATR1Q9H583 2144 aaKnown RBP5.98□□□□□ -1.45
CHD3-213ENST00000571249 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.98□□□□□ -1.45
CHD3-213ENST00000571249 A0A1B0GUS0 222 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 A0A1W2PR80 420 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 ANKDD1BA6NHY2 528 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 OR5H1A6NKK0 313 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 SHISA8B8ZZ34 492 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 SCDO00767 359 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 SLC22A2O15244 555 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 DHHO43323 396 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 SKAP2O75563 359 aaPredicted RBP5.98□□□□□ -1.45
CHD3-213ENST00000571249 LYPLA1O75608 230 aaPredicted RBP5.98□□□□□ -1.45
CHD3-213ENST00000571249 GPR75O95800 540 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 GUCA1CO95843 209 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 OPN1LWP04000 364 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 OPN1MWP04001 364 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 CT62P0C5K7 136 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 C1GALT1C1LP0DN25 315 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 OPN1MW2P0DN77 364 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 OPN1MW3P0DN78 364 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 ZNF17P17021 662 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 ZNF37AP17032 561 aaPredicted RBP5.98□□□□□ -1.45
CHD3-213ENST00000571249 CALB2P22676 271 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 CALRP27797 417 aaKnown RBP5.98□□□□□ -1.45
CHD3-213ENST00000571249 AQP5P55064 265 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 RPL11P62913 178 aaKnown RBP5.98□□□□□ -1.45
CHD3-213ENST00000571249 ELF3P78545 371 aaPredicted RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms