RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 PMS2P2O95744 297 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 PLAUP00749 431 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 BCHEP06276 602 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 THBS1P07996 1170 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 NUDT7P0C024 238 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 TFPTP0C1Z6 253 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 NR2F1P10589 423 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 IMPDH2P12268 514 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 H2AFXP16104 143 aaPredicted RBP6.93□□□□□ -1.3
CDH3-209ENST00000569080 NTF4P34130 210 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 RYKP34925 604 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 ACAA2P42765 397 aaKnown RBP6.93□□□□□ -1.3
CDH3-209ENST00000569080 IDH3AP50213 366 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 ANXA11P50995 505 aaKnown RBP6.93□□□□□ -1.3
CDH3-209ENST00000569080 SLC16A1P53985 500 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 RIPPLY3P57055 190 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 DSTNP60981 165 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 H3F3AP84243 136 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 RASGEF1BQ0VAM2 473 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 PDK3Q15120 406 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 TAB1Q15750 504 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 BEX5Q5H9J7 111 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 RPS26P11Q5JNZ5 115 aaPredicted RBP6.93□□□□□ -1.3
CDH3-209ENST00000569080 LRIF1Q5T3J3 769 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 SFRP5Q5T4F7 317 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 RNF220Q5VTB9 566 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 GTF2IRD2BQ6EKJ0 949 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 SLC2A7Q6PXP3 512 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 Q6ZT83 130 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.93□□□□□ -1.3
CDH3-209ENST00000569080 ATG4DQ86TL0 474 aaPredicted RBP6.93□□□□□ -1.3
CDH3-209ENST00000569080 GTF2IRD2Q86UP8 949 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 STK32CQ86UX6 486 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 VRK2Q86Y07 508 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 MIER2Q8N344 545 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 ARFGAP2Q8N6H7 521 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 PMM1Q92871 262 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 TMEM19Q96HH6 336 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 REXO5Q96IC2 774 aaKnown RBP6.93□□□□□ -1.3
CDH3-209ENST00000569080 ITCHQ96J02 903 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 PIP5K1AQ99755 562 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 TACO1Q9BSH4 297 aaKnown RBP6.93□□□□□ -1.3
CDH3-209ENST00000569080 ZNF385DQ9H6B1 395 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 TCF7L2Q9NQB0 619 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 RLIMQ9NVW2 624 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 SLAMF8Q9P0V8 285 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 PRSS50Q9UI38 385 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 EDARQ9UNE0 448 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 ZNF443Q9Y2A4 671 aaPredicted RBP6.93□□□□□ -1.3
CDH3-209ENST00000569080 HDGFL3Q9Y3E1 203 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 PCDHB14Q9Y5E9 798 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 GMEB1Q9Y692 573 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 ARID1AO14497 2285 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 CADP27708 2225 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 UQCRHLA0A096LP55 91 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 A0A096LPI6 279 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 TMED7-TICAM2A0A0A6YYA0 188 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 CFAP73A6NFT4 308 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 SULT2B1O00204 365 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 ZNF208O43345 1280 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 SASH3O75995 380 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 TGDSO95455 350 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 CNOT4O95628 575 aaKnown RBP6.92□□□□□ -1.3
CDH3-209ENST00000569080 ADAP00813 363 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 DBIP07108 87 aaKnown RBP6.92□□□□□ -1.3
CDH3-209ENST00000569080 PRG2P13727 222 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 CD99P14209 185 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 IGHV1-2P23083 117 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 TACR3P29371 465 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 SLC1A3P43003 542 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 IDH2P48735 452 aaKnown RBP6.92□□□□□ -1.3
CDH3-209ENST00000569080 CLK1P49759 484 aaKnown RBP6.92□□□□□ -1.3
CDH3-209ENST00000569080 POLR2HP52434 150 aaKnown RBP6.92□□□□□ -1.3
CDH3-209ENST00000569080 CRISP3P54108 245 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 NR1H2P55055 460 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 CSNK2A1P68400 391 aaPredicted RBP6.92□□□□□ -1.3
CDH3-209ENST00000569080 P2RY6Q15077 328 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 RGNQ15493 299 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 ACKR1Q16570 336 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 LIN52Q52LA3 116 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 C6orf10Q5SRN2 563 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 BLOC1S3Q6QNY0 202 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 ZNF704Q6ZNC4 412 aaPredicted RBP6.92□□□□□ -1.3
CDH3-209ENST00000569080 C20orf204Q6ZNR8 217 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 MTDHQ86UE4 582 aaKnown RBP6.92□□□□□ -1.3
CDH3-209ENST00000569080 COMTD1Q86VU5 262 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 WFDC8Q8IUA0 241 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 LRRC75A-AS1Q8N1F1 130 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 STEAP2Q8NFT2 490 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 OR52P1PQ8NH57 321 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 LILRB1Q8NHL6 650 aaPredicted RBP6.92□□□□□ -1.3
CDH3-209ENST00000569080 ZNF563Q8TA94 476 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 LRRC8CQ8TDW0 803 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 STON2Q8WXE9 905 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 KISS1RQ969F8 398 aaPredicted RBP6.92□□□□□ -1.3
CDH3-209ENST00000569080 MAL2Q969L2 176 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 DNAJA3Q96EY1 480 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 PLPPR2Q96GM1 343 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 CCDC28BQ9BUN5 200 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 POTEKPQ9BYX7 375 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms