RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 PRRX1P54821 245 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 CLDN17P56750 224 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 ACTR3P61158 418 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 YWHAGP61981 247 aaKnown RBP eCLIP2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 SNRPD1P62314 119 aaKnown RBP2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 RPS24P62847 133 aaKnown RBP2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 KLC1Q07866 573 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 CNTN1Q12860 1018 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 ZNF177Q13360 481 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 ORC2Q13416 577 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 ILKQ13418 452 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 SPHARQ15513 63 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 TRIP10Q15642 601 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 SNRNP35Q16560 246 aaKnown RBP2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 ZNF699Q32M78 642 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 GPAT3Q53EU6 434 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 MPPE1Q53F39 396 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 TPRG1LQ5T0D9 272 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 C9orf64Q5T6V5 341 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 ASPHD2Q6ICH7 369 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 CENPQQ7L2Z9 268 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 MYPOPQ86VE0 399 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 WDR49Q8IV35 697 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 PHC2Q8IXK0 858 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 UBQLNLQ8IYU4 475 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 LSMEM2Q8N112 164 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 OR4C6Q8NH72 309 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 OR2T6Q8NHC8 308 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 UBA3Q8TBC4 463 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 MRGPRDQ8TDS7 321 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 LMX1AQ8TE12 382 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 NCLNQ969V3 563 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 TMEM45BQ96B21 275 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 BTBD9Q96Q07 612 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 RAB40CQ96S21 281 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 OPRPNQ99935 248 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 FUNDC2Q9BWH2 189 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 FAM192AQ9GZU8 254 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 TCEAL2Q9H3H9 227 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 FBXO44Q9H4M3 255 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 ATP13A3Q9H7F0 1226 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 METTL7AQ9H8H3 244 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 CSNK1G1Q9HCP0 422 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 SPHK1Q9NYA1 384 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 OR6C2Q9NZP2 312 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 P2RX2Q9UBL9 471 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 PISDQ9UG56 409 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 SUN2Q9UH99 717 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 ASIC3Q9UHC3 531 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 CYTH4Q9UIA0 394 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 STUB1Q9UNE7 303 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 ERVW-1Q9UQF0 538 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 SCML2Q9UQR0 700 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 ERVK-19Q9WJR5 959 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 TRPM6Q9BX84 2022 aa2.84□□□□□ -1.95
HMGB1P6-201ENST00000569046 GOLGA8OA6NCC3 632 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 RNF222A6NCQ9 220 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 MSGN1A6NI15 193 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 LRRIQ3A6PVS8 624 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 YJEFN3A6XGL0 299 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 E7ENQ6 273 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 GOLGA8NF8WBI6 632 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 H3BQV1 296 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 RAD51BO15315 384 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 MLNRO43193 412 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 ZNF208O43345 1280 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 B4GALT2O60909 372 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 CRLF1O75462 422 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 CLN5O75503 358 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 KHDRBS3O75525 346 aaKnown RBP2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 GRAP2O75791 330 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 EPOP01588 193 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 IGHEP01854 428 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 KRT7P08729 469 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 PRKAR1AP10644 381 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 KRT3P12035 628 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 GALP22466 123 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 HTR2AP28223 471 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 STIP1P31948 543 aaKnown RBP2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 UGT1A5P35504 534 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 CETN2P41208 172 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 OR3A3P47888 321 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 SLC6A8P48029 635 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 DUSP3P51452 185 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 GEMP55040 296 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 MAZP56270 477 aaKnown RBP2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 CCL7P80098 99 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 CYP24A1Q07973 514 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 TRAP1Q12931 704 aaKnown RBP2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 HEPACAMQ14CZ8 416 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 EFTUD2Q15029 972 aaKnown RBP eCLIP2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 HNRNPA1L2Q32P51 320 aaKnown RBP2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 GPR33Q49SQ1 333 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 SLC25A53Q5H9E4 307 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 ATP1A1-AS1Q5TC04 95 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 LIPJQ5W064 366 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 SEL1L3Q68CR1 1132 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 OR4C11Q6IEV9 310 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 CLEC2AQ6UVW9 174 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 CBLN3Q6UW01 205 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms