RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 CCDC126Q96EE4 140 aa10.87□□□□□ -0.67
SNX29-207ENST00000568949 BOD1Q96IK1 185 aa10.87□□□□□ -0.67
SNX29-207ENST00000568949 THUMPD3Q9BV44 507 aaKnown RBP10.87□□□□□ -0.67
SNX29-207ENST00000568949 RAB1BQ9H0U4 201 aa10.87□□□□□ -0.67
SNX29-207ENST00000568949 PLK3Q9H4B4 646 aa10.87□□□□□ -0.67
SNX29-207ENST00000568949 OBP2BQ9NPH6 170 aa10.87□□□□□ -0.67
SNX29-207ENST00000568949 CA10Q9NS85 328 aa10.87□□□□□ -0.67
SNX29-207ENST00000568949 ACER3Q9NUN7 267 aa10.87□□□□□ -0.67
SNX29-207ENST00000568949 PARPBPQ9NWS1 579 aa10.87□□□□□ -0.67
SNX29-207ENST00000568949 UPB1Q9UBR1 384 aa10.87□□□□□ -0.67
SNX29-207ENST00000568949 FAF1Q9UNN5 650 aaPredicted RBP10.87□□□□□ -0.67
SNX29-207ENST00000568949 HDGFL3Q9Y3E1 203 aa10.87□□□□□ -0.67
SNX29-207ENST00000568949 SPIN1Q9Y657 262 aaPredicted RBP10.87□□□□□ -0.67
SNX29-207ENST00000568949 SERINC4A6NH21 518 aa10.86□□□□□ -0.67
SNX29-207ENST00000568949 SLC28A1O00337 649 aa10.86□□□□□ -0.67
SNX29-207ENST00000568949 TFPIP10646 304 aa10.86□□□□□ -0.67
SNX29-207ENST00000568949 SDC1P18827 310 aa10.86□□□□□ -0.67
SNX29-207ENST00000568949 PGCP20142 388 aa10.86□□□□□ -0.67
SNX29-207ENST00000568949 PAX7P23759 505 aa10.86□□□□□ -0.67
SNX29-207ENST00000568949 FKBP2P26885 142 aaKnown RBP10.86□□□□□ -0.67
SNX29-207ENST00000568949 IL2RGP31785 369 aa10.86□□□□□ -0.67
SNX29-207ENST00000568949 APOBEC1P41238 236 aaKnown RBP10.86□□□□□ -0.67
SNX29-207ENST00000568949 MAGEA8P43361 318 aa10.86□□□□□ -0.67
SNX29-207ENST00000568949 CLK1P49759 484 aaKnown RBP10.86□□□□□ -0.67
SNX29-207ENST00000568949 IDH3GP51553 393 aaPredicted RBP10.86□□□□□ -0.67
SNX29-207ENST00000568949 ACTG1P63261 375 aa10.86□□□□□ -0.67
SNX29-207ENST00000568949 SLC7A5Q01650 507 aa10.86□□□□□ -0.67
SNX29-207ENST00000568949 SCGB2A2Q13296 93 aa10.86□□□□□ -0.67
SNX29-207ENST00000568949 SKP2Q13309 424 aa10.86□□□□□ -0.67
SNX29-207ENST00000568949 KLHL24Q6TFL4 600 aa10.86□□□□□ -0.67
SNX29-207ENST00000568949 CASP12Q6UXS9 341 aa10.86□□□□□ -0.67
SNX29-207ENST00000568949 R3HCC1LQ7Z5L2 792 aaKnown RBP10.86□□□□□ -0.67
SNX29-207ENST00000568949 OR56A1Q8NGH5 318 aa10.86□□□□□ -0.67
SNX29-207ENST00000568949 NEU4Q8WWR8 484 aaPredicted RBP10.86□□□□□ -0.67
SNX29-207ENST00000568949 TSSK3Q96PN8 268 aa10.86□□□□□ -0.67
SNX29-207ENST00000568949 FMO2Q99518 471 aa10.86□□□□□ -0.67
SNX29-207ENST00000568949 KATNB1Q9BVA0 655 aa10.86□□□□□ -0.67
SNX29-207ENST00000568949 NMUR2Q9GZQ4 415 aa10.86□□□□□ -0.67
SNX29-207ENST00000568949 METTL17Q9H7H0 456 aaPredicted RBP10.86□□□□□ -0.67
SNX29-207ENST00000568949 SLC7A10Q9NS82 523 aa10.86□□□□□ -0.67
SNX29-207ENST00000568949 PCDHB14Q9Y5E9 798 aa10.86□□□□□ -0.67
SNX29-207ENST00000568949 KCNE3Q9Y6H6 103 aa10.86□□□□□ -0.67
SNX29-207ENST00000568949 FAM157AC9JC47 383 aa10.85□□□□□ -0.67
SNX29-207ENST00000568949 ANKRD28O15084 1053 aa10.85□□□□□ -0.67
SNX29-207ENST00000568949 ERCC1P07992 297 aaPredicted RBP10.85□□□□□ -0.67
SNX29-207ENST00000568949 GSTA1P08263 222 aa10.85□□□□□ -0.67
SNX29-207ENST00000568949 UROSP10746 265 aa10.85□□□□□ -0.67
SNX29-207ENST00000568949 DAOP14920 347 aa10.85□□□□□ -0.67
SNX29-207ENST00000568949 EFNA1P20827 205 aaPredicted RBP10.85□□□□□ -0.67
SNX29-207ENST00000568949 MPGP29372 298 aa10.85□□□□□ -0.67
SNX29-207ENST00000568949 ASMTP46597 345 aa10.85□□□□□ -0.67
SNX29-207ENST00000568949 CCT3P49368 545 aaKnown RBP10.85□□□□□ -0.67
SNX29-207ENST00000568949 H3F3AP84243 136 aa10.85□□□□□ -0.67
SNX29-207ENST00000568949 ADIPOQQ15848 244 aa10.85□□□□□ -0.67
SNX29-207ENST00000568949 ZNF141Q15928 474 aa10.85□□□□□ -0.67
SNX29-207ENST00000568949 PDZK1Q5T2W1 519 aa10.85□□□□□ -0.67
SNX29-207ENST00000568949 C9orf135Q5VTT2 229 aa10.85□□□□□ -0.67
SNX29-207ENST00000568949 RINLQ6ZS11 566 aa10.85□□□□□ -0.67
SNX29-207ENST00000568949 FRMD7Q6ZUT3 714 aa10.85□□□□□ -0.67
SNX29-207ENST00000568949 SPATA19Q7Z5L4 167 aa10.85□□□□□ -0.67
SNX29-207ENST00000568949 CCDC103Q8IW40 242 aa10.85□□□□□ -0.67
SNX29-207ENST00000568949 ZNF786Q8N393 782 aa10.85□□□□□ -0.67
SNX29-207ENST00000568949 EIF1ADQ8N9N8 165 aaKnown RBP10.85□□□□□ -0.67
SNX29-207ENST00000568949 PSMA8Q8TAA3 256 aa10.85□□□□□ -0.67
SNX29-207ENST00000568949 FAM216AQ8WUB2 273 aa10.85□□□□□ -0.67
SNX29-207ENST00000568949 IFT81Q8WYA0 676 aa10.85□□□□□ -0.67
SNX29-207ENST00000568949 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.85□□□□□ -0.67
SNX29-207ENST00000568949 GCDHQ92947 438 aaPredicted RBP10.85□□□□□ -0.67
SNX29-207ENST00000568949 ARL5BQ96KC2 179 aa10.85□□□□□ -0.67
SNX29-207ENST00000568949 SNX18Q96RF0 628 aa10.85□□□□□ -0.67
SNX29-207ENST00000568949 SDF2Q99470 211 aa10.85□□□□□ -0.67
SNX29-207ENST00000568949 KCNS3Q9BQ31 491 aa10.85□□□□□ -0.67
SNX29-207ENST00000568949 CCDC106Q9BWC9 280 aa10.85□□□□□ -0.67
SNX29-207ENST00000568949 SAP130Q9H0E3 1048 aa10.85□□□□□ -0.67
SNX29-207ENST00000568949 GPATCH2Q9NW75 528 aa10.85□□□□□ -0.67
SNX29-207ENST00000568949 CHRNA9Q9UGM1 479 aa10.85□□□□□ -0.67
SNX29-207ENST00000568949 BAIAP2L1Q9UHR4 511 aa10.85□□□□□ -0.67
SNX29-207ENST00000568949 TRAPPC4Q9Y296 219 aa10.85□□□□□ -0.67
SNX29-207ENST00000568949 SLC9A8Q9Y2E8 581 aa10.85□□□□□ -0.67
SNX29-207ENST00000568949 TMED5Q9Y3A6 229 aa10.85□□□□□ -0.67
SNX29-207ENST00000568949 FLVCR1Q9Y5Y0 555 aa10.85□□□□□ -0.67
SNX29-207ENST00000568949 A0A087WUV0 522 aaPredicted RBP10.84□□□□□ -0.67
SNX29-207ENST00000568949 IGHV1-18A0A0C4DH31 117 aa10.84□□□□□ -0.67
SNX29-207ENST00000568949 B4DSR2 109 aa10.84□□□□□ -0.67
SNX29-207ENST00000568949 CYP7B1O75881 506 aa10.84□□□□□ -0.67
SNX29-207ENST00000568949 SLU7O95391 586 aaKnown RBP10.84□□□□□ -0.67
SNX29-207ENST00000568949 CSTAP01040 98 aa10.84□□□□□ -0.67
SNX29-207ENST00000568949 CRYAAP02489 173 aa10.84□□□□□ -0.67
SNX29-207ENST00000568949 OR4A8P0C604 315 aa10.84□□□□□ -0.67
SNX29-207ENST00000568949 NEFHP12036 1026 aa10.84□□□□□ -0.67
SNX29-207ENST00000568949 RPL3P39023 403 aaKnown RBP10.84□□□□□ -0.67
SNX29-207ENST00000568949 KHKP50053 298 aa10.84□□□□□ -0.67
SNX29-207ENST00000568949 LGALS3BPQ08380 585 aa10.84□□□□□ -0.67
SNX29-207ENST00000568949 TP53BP2Q13625 1128 aa10.84□□□□□ -0.67
SNX29-207ENST00000568949 RIN1Q13671 783 aa10.84□□□□□ -0.67
SNX29-207ENST00000568949 TSPO2Q5TGU0 170 aa10.84□□□□□ -0.67
SNX29-207ENST00000568949 RNF165Q6ZSG1 346 aa10.84□□□□□ -0.67
SNX29-207ENST00000568949 CLHC1Q8NHS4 586 aa10.84□□□□□ -0.67
SNX29-207ENST00000568949 ZNF418Q8TF45 676 aaPredicted RBP10.84□□□□□ -0.67
SNX29-207ENST00000568949 OR5P2Q8WZ92 322 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms